RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 RALBP1Q15311 655 aa17.62■□□□□ 0.41
SFXN3-205ENST00000470252 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
SFXN3-205ENST00000470252 KTN1Q86UP2 1357 aaKnown RBP17.61■□□□□ 0.41
SFXN3-205ENST00000470252 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
SFXN3-205ENST00000470252 C9orf84Q5VXU9 1444 aa17.61■□□□□ 0.41
SFXN3-205ENST00000470252 DCAF11Q8TEB1 546 aa17.6■□□□□ 0.41
SFXN3-205ENST00000470252 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
SFXN3-205ENST00000470252 SHANK2Q9UPX8 1470 aa17.59■□□□□ 0.41
SFXN3-205ENST00000470252 KDM5DQ9BY66 1539 aa17.58■□□□□ 0.41
SFXN3-205ENST00000470252 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.41
SFXN3-205ENST00000470252 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.4
SFXN3-205ENST00000470252 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
SFXN3-205ENST00000470252 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
SFXN3-205ENST00000470252 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
SFXN3-205ENST00000470252 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
SFXN3-205ENST00000470252 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
SFXN3-205ENST00000470252 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
SFXN3-205ENST00000470252 NLRP13Q86W25 1043 aa17.54■□□□□ 0.4
SFXN3-205ENST00000470252 ABCC10Q5T3U5 1492 aa17.53■□□□□ 0.4
SFXN3-205ENST00000470252 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
SFXN3-205ENST00000470252 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
SFXN3-205ENST00000470252 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
SFXN3-205ENST00000470252 PARD3Q8TEW0 1356 aa17.52■□□□□ 0.39
SFXN3-205ENST00000470252 PTPRGP23470 1445 aa17.51■□□□□ 0.39
SFXN3-205ENST00000470252 PDE3BQ13370 1112 aa17.51■□□□□ 0.39
SFXN3-205ENST00000470252 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.39
SFXN3-205ENST00000470252 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
SFXN3-205ENST00000470252 ABCA8O94911 1581 aa17.49■□□□□ 0.39
SFXN3-205ENST00000470252 PDE4AP27815 886 aa17.48■□□□□ 0.39
SFXN3-205ENST00000470252 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
SFXN3-205ENST00000470252 ATP10BO94823 1461 aa17.48■□□□□ 0.39
SFXN3-205ENST00000470252 PRAG1Q86YV5 1406 aa17.48■□□□□ 0.39
SFXN3-205ENST00000470252 CDCA7LQ96GN5 454 aa17.47■□□□□ 0.39
SFXN3-205ENST00000470252 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
SFXN3-205ENST00000470252 CLASP1Q7Z460 1538 aa17.46■□□□□ 0.39
SFXN3-205ENST00000470252 CCDC144AA2RUR9 1427 aa17.45■□□□□ 0.38
SFXN3-205ENST00000470252 NUP160Q12769 1436 aa17.45■□□□□ 0.38
SFXN3-205ENST00000470252 PER1O15534 1290 aaPredicted RBP17.45■□□□□ 0.38
SFXN3-205ENST00000470252 NBPF1Q3BBV0 1214 aa17.45■□□□□ 0.38
SFXN3-205ENST00000470252 RGL3Q3MIN7 710 aa17.45■□□□□ 0.38
SFXN3-205ENST00000470252 BACH2Q9BYV9 841 aa17.45■□□□□ 0.38
SFXN3-205ENST00000470252 MS4A1P11836 297 aa17.44■□□□□ 0.38
SFXN3-205ENST00000470252 CC2D1BQ5T0F9 858 aaKnown RBP17.44■□□□□ 0.38
SFXN3-205ENST00000470252 PLIN1O60240 522 aa17.43■□□□□ 0.38
SFXN3-205ENST00000470252 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
SFXN3-205ENST00000470252 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
SFXN3-205ENST00000470252 CCDC141Q6ZP82 1450 aa17.42■□□□□ 0.38
SFXN3-205ENST00000470252 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
SFXN3-205ENST00000470252 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
SFXN3-205ENST00000470252 LAS1LQ9Y4W2 734 aaKnown RBP17.41■□□□□ 0.38
SFXN3-205ENST00000470252 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
SFXN3-205ENST00000470252 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
SFXN3-205ENST00000470252 LAMC1P11047 1609 aa17.4■□□□□ 0.38
SFXN3-205ENST00000470252 PRDM15P57071 1507 aaPredicted RBP17.39■□□□□ 0.37
SFXN3-205ENST00000470252 GPRASP1Q5JY77 1395 aa17.39■□□□□ 0.37
SFXN3-205ENST00000470252 A2MP01023 1474 aa17.39■□□□□ 0.37
SFXN3-205ENST00000470252 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
SFXN3-205ENST00000470252 PANK3Q9H999 370 aa17.39■□□□□ 0.37
SFXN3-205ENST00000470252 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
SFXN3-205ENST00000470252 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
SFXN3-205ENST00000470252 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
SFXN3-205ENST00000470252 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
SFXN3-205ENST00000470252 PREX2Q70Z35 1606 aa17.38■□□□□ 0.37
SFXN3-205ENST00000470252 TESK2Q96S53 571 aa17.37■□□□□ 0.37
SFXN3-205ENST00000470252 INSRP06213 1382 aa17.37■□□□□ 0.37
SFXN3-205ENST00000470252 NEFMP07197 916 aa17.37■□□□□ 0.37
SFXN3-205ENST00000470252 ZMYM4Q5VZL5 1548 aa17.36■□□□□ 0.37
SFXN3-205ENST00000470252 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
SFXN3-205ENST00000470252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.37
SFXN3-205ENST00000470252 UNC13BO14795 1591 aa17.36■□□□□ 0.37
SFXN3-205ENST00000470252 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
SFXN3-205ENST00000470252 SKAP1Q86WV1 359 aa17.35■□□□□ 0.37
SFXN3-205ENST00000470252 EIF2AK4Q9P2K8 1649 aaKnown RBP17.35■□□□□ 0.37
SFXN3-205ENST00000470252 PLEKHH2Q8IVE3 1493 aa17.35■□□□□ 0.37
SFXN3-205ENST00000470252 TMF1P82094 1093 aa17.34■□□□□ 0.37
SFXN3-205ENST00000470252 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
SFXN3-205ENST00000470252 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.36
SFXN3-205ENST00000470252 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
SFXN3-205ENST00000470252 PPM1GO15355 546 aaPredicted RBP17.31■□□□□ 0.36
SFXN3-205ENST00000470252 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
SFXN3-205ENST00000470252 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
SFXN3-205ENST00000470252 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
SFXN3-205ENST00000470252 ERCC6L2Q5T890 1561 aa17.3■□□□□ 0.36
SFXN3-205ENST00000470252 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
SFXN3-205ENST00000470252 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
SFXN3-205ENST00000470252 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
SFXN3-205ENST00000470252 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
SFXN3-205ENST00000470252 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
SFXN3-205ENST00000470252 RNF17Q9BXT8 1623 aaKnown RBP17.27■□□□□ 0.35
SFXN3-205ENST00000470252 TTC37Q6PGP7 1564 aa17.25■□□□□ 0.35
SFXN3-205ENST00000470252 PLXNC1O60486 1568 aa17.25■□□□□ 0.35
SFXN3-205ENST00000470252 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
SFXN3-205ENST00000470252 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
SFXN3-205ENST00000470252 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
SFXN3-205ENST00000470252 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
SFXN3-205ENST00000470252 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
SFXN3-205ENST00000470252 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
SFXN3-205ENST00000470252 MAGI2Q86UL8 1455 aa17.23■□□□□ 0.35
SFXN3-205ENST00000470252 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
SFXN3-205ENST00000470252 CENPQQ7L2Z9 268 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms