RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 HRO43593 1189 aa14.64□□□□□ -0.07
COL11A1-208ENST00000470170 NBR1Q14596 966 aa14.64□□□□□ -0.07
COL11A1-208ENST00000470170 VPS9D1Q9Y2B5 631 aa14.64□□□□□ -0.07
COL11A1-208ENST00000470170 RBM33Q96EV2 1170 aaKnown RBP14.63□□□□□ -0.07
COL11A1-208ENST00000470170 ZBED2Q9BTP6 218 aa14.62□□□□□ -0.07
COL11A1-208ENST00000470170 GRXCR2A6NFK2 248 aa14.6□□□□□ -0.07
COL11A1-208ENST00000470170 COL9A1P20849 921 aa14.6□□□□□ -0.07
COL11A1-208ENST00000470170 PPP1R3GB7ZBB8 358 aa14.59□□□□□ -0.07
COL11A1-208ENST00000470170 SLC4A5Q9BY07 1137 aa14.59□□□□□ -0.07
COL11A1-208ENST00000470170 C6orf132Q5T0Z8 1188 aa14.58□□□□□ -0.08
COL11A1-208ENST00000470170 ARHGEF1Q92888 912 aaKnown RBP14.57□□□□□ -0.08
COL11A1-208ENST00000470170 EN1Q05925 392 aaPredicted RBP14.56□□□□□ -0.08
COL11A1-208ENST00000470170 MAP3K7O43318 606 aa14.55□□□□□ -0.08
COL11A1-208ENST00000470170 PRIM1P49642 420 aaKnown RBP14.55□□□□□ -0.08
COL11A1-208ENST00000470170 PROX2Q3B8N5 592 aa14.55□□□□□ -0.08
COL11A1-208ENST00000470170 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
COL11A1-208ENST00000470170 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
COL11A1-208ENST00000470170 P3H3Q8IVL6 736 aa14.52□□□□□ -0.09
COL11A1-208ENST00000470170 BHMG1C9JSJ3 638 aaPredicted RBP14.5□□□□□ -0.09
COL11A1-208ENST00000470170 OSBPP22059 807 aa14.49□□□□□ -0.09
COL11A1-208ENST00000470170 MLLT3P42568 568 aaPredicted RBP14.47□□□□□ -0.09
COL11A1-208ENST00000470170 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
COL11A1-208ENST00000470170 KCTD12Q96CX2 325 aaKnown RBP14.46□□□□□ -0.09
COL11A1-208ENST00000470170 RABGEF1Q9UJ41 708 aa14.45□□□□□ -0.1
COL11A1-208ENST00000470170 MRPL50Q8N5N7 158 aaKnown RBP14.44□□□□□ -0.1
COL11A1-208ENST00000470170 NBPF3Q9H094 633 aa14.44□□□□□ -0.1
COL11A1-208ENST00000470170 CDHR5Q9HBB8 845 aa14.43□□□□□ -0.1
COL11A1-208ENST00000470170 KIAA1468Q9P260 1216 aa14.42□□□□□ -0.1
COL11A1-208ENST00000470170 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
COL11A1-208ENST00000470170 SEMA3EO15041 775 aa14.39□□□□□ -0.11
COL11A1-208ENST00000470170 GOLGA8CPA6NN73 597 aa14.38□□□□□ -0.11
COL11A1-208ENST00000470170 ONECUT3O60422 494 aaPredicted RBP14.37□□□□□ -0.11
COL11A1-208ENST00000470170 HCSTQ9UBK5 93 aa14.37□□□□□ -0.11
COL11A1-208ENST00000470170 TSKSQ9UJT2 592 aa14.37□□□□□ -0.11
COL11A1-208ENST00000470170 SEPT9Q9UHD8 586 aaPredicted RBP14.36□□□□□ -0.11
COL11A1-208ENST00000470170 WNT2BQ93097 391 aa14.35□□□□□ -0.11
COL11A1-208ENST00000470170 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
COL11A1-208ENST00000470170 PRSS12P56730 875 aa14.34□□□□□ -0.11
COL11A1-208ENST00000470170 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
COL11A1-208ENST00000470170 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
COL11A1-208ENST00000470170 PTPN5P54829 565 aa14.32□□□□□ -0.12
COL11A1-208ENST00000470170 THSD4Q6ZMP0 1018 aa14.32□□□□□ -0.12
COL11A1-208ENST00000470170 FAM198AQ9UFP1 575 aa14.32□□□□□ -0.12
COL11A1-208ENST00000470170 LAPTM4BQ86VI4 370 aa14.31□□□□□ -0.12
COL11A1-208ENST00000470170 PACS2Q86VP3 889 aa14.3□□□□□ -0.12
COL11A1-208ENST00000470170 NPDC1Q9NQX5 325 aaPredicted RBP14.3□□□□□ -0.12
COL11A1-208ENST00000470170 ANKK1Q8NFD2 765 aa14.27□□□□□ -0.13
COL11A1-208ENST00000470170 ZFRQ96KR1 1074 aaKnown RBP14.27□□□□□ -0.13
COL11A1-208ENST00000470170 C3orf80F5H4A9 247 aa14.26□□□□□ -0.13
COL11A1-208ENST00000470170 SMAPO00193 183 aa14.26□□□□□ -0.13
COL11A1-208ENST00000470170 FAM98CQ17RN3 349 aaKnown RBP14.26□□□□□ -0.13
COL11A1-208ENST00000470170 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
COL11A1-208ENST00000470170 BCAMP50895 628 aa14.24□□□□□ -0.13
COL11A1-208ENST00000470170 PADI6Q6TGC4 694 aa14.24□□□□□ -0.13
COL11A1-208ENST00000470170 RBM27Q9P2N5 1060 aaKnown RBP14.24□□□□□ -0.13
COL11A1-208ENST00000470170 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
COL11A1-208ENST00000470170 TATDN2Q93075 761 aa14.22□□□□□ -0.13
COL11A1-208ENST00000470170 PNMA3Q9UL41 463 aa14.22□□□□□ -0.13
COL11A1-208ENST00000470170 NBPF26B4DH59 902 aa14.21□□□□□ -0.13
COL11A1-208ENST00000470170 PTGDRQ13258 359 aa14.21□□□□□ -0.13
COL11A1-208ENST00000470170 SOWAHBA6NEL2 793 aa14.2□□□□□ -0.14
COL11A1-208ENST00000470170 TTC13Q8NBP0 860 aa14.2□□□□□ -0.14
COL11A1-208ENST00000470170 NUDT18Q6ZVK8 323 aa14.19□□□□□ -0.14
COL11A1-208ENST00000470170 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
COL11A1-208ENST00000470170 PLA2G2EQ9NZK7 142 aa14.16□□□□□ -0.14
COL11A1-208ENST00000470170 SMYD5Q6GMV2 418 aa14.15□□□□□ -0.14
COL11A1-208ENST00000470170 LRCH3Q96II8 777 aa14.15□□□□□ -0.14
COL11A1-208ENST00000470170 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.15□□□□□ -0.14
COL11A1-208ENST00000470170 SAMD7Q7Z3H4 446 aa14.12□□□□□ -0.15
COL11A1-208ENST00000470170 WBP1LQ9NX94 342 aa14.12□□□□□ -0.15
COL11A1-208ENST00000470170 FCHSD2O94868 740 aa14.11□□□□□ -0.15
COL11A1-208ENST00000470170 HPS5Q9UPZ3 1129 aa14.1□□□□□ -0.15
COL11A1-208ENST00000470170 TSR3Q9UJK0 312 aaKnown RBP14.08□□□□□ -0.16
COL11A1-208ENST00000470170 FAM161AQ3B820 660 aa14.07□□□□□ -0.16
COL11A1-208ENST00000470170 EYA1Q99502 592 aa14.07□□□□□ -0.16
COL11A1-208ENST00000470170 ADGRG1Q9Y653 693 aa14.04□□□□□ -0.16
COL11A1-208ENST00000470170 GPR37O15354 613 aa14.03□□□□□ -0.16
COL11A1-208ENST00000470170 RNF40O75150 1001 aa14.03□□□□□ -0.16
COL11A1-208ENST00000470170 PPP4CP60510 307 aa14.02□□□□□ -0.17
COL11A1-208ENST00000470170 HIC1Q14526 733 aa14.02□□□□□ -0.17
COL11A1-208ENST00000470170 SWT1Q5T5J6 900 aaKnown RBP14.02□□□□□ -0.17
COL11A1-208ENST00000470170 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
COL11A1-208ENST00000470170 NYAP1Q6ZVC0 841 aa14.01□□□□□ -0.17
COL11A1-208ENST00000470170 FECHP22830 423 aa14□□□□□ -0.17
COL11A1-208ENST00000470170 RBM46Q8TBY0 533 aaKnown RBP14□□□□□ -0.17
COL11A1-208ENST00000470170 GPIHBP1Q8IV16 184 aa13.99□□□□□ -0.17
COL11A1-208ENST00000470170 GNPATO15228 680 aa13.97□□□□□ -0.17
COL11A1-208ENST00000470170 DNAJB2P25686 324 aa13.95□□□□□ -0.18
COL11A1-208ENST00000470170 RCCD1A6NED2 376 aa13.94□□□□□ -0.18
COL11A1-208ENST00000470170 TULP1O00294 542 aaPredicted RBP13.94□□□□□ -0.18
COL11A1-208ENST00000470170 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-208ENST00000470170 SLF2Q8IX21 1173 aa13.93□□□□□ -0.18
COL11A1-208ENST00000470170 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
COL11A1-208ENST00000470170 TMEM134Q9H6X4 195 aa13.92□□□□□ -0.18
COL11A1-208ENST00000470170 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
COL11A1-208ENST00000470170 OATP04181 439 aa13.9□□□□□ -0.18
COL11A1-208ENST00000470170 METTL3Q86U44 580 aaKnown RBP13.9□□□□□ -0.18
COL11A1-208ENST00000470170 APLP1P51693 650 aa13.89□□□□□ -0.19
COL11A1-208ENST00000470170 SLC4A3P48751 1232 aa13.88□□□□□ -0.19
COL11A1-208ENST00000470170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms