RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 WNT2BQ93097 391 aa11.24□□□□□ -0.61
SCFD1-205ENST00000469043 EPAS1Q99814 870 aa11.24□□□□□ -0.61
SCFD1-205ENST00000469043 THSD4Q6ZMP0 1018 aa11.21□□□□□ -0.61
SCFD1-205ENST00000469043 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.61
SCFD1-205ENST00000469043 COL9A1P20849 921 aa11.19□□□□□ -0.62
SCFD1-205ENST00000469043 PROX2Q3B8N5 592 aa11.17□□□□□ -0.62
SCFD1-205ENST00000469043 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
SCFD1-205ENST00000469043 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
SCFD1-205ENST00000469043 WDR70Q9NW82 654 aa11.16□□□□□ -0.62
SCFD1-205ENST00000469043 ONECUT3O60422 494 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-205ENST00000469043 PAXIP1Q6ZW49 1069 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-205ENST00000469043 DDX12PQ92771 950 aa11.15□□□□□ -0.62
SCFD1-205ENST00000469043 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
SCFD1-205ENST00000469043 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-205ENST00000469043 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
SCFD1-205ENST00000469043 ANKK1Q8NFD2 765 aa11.14□□□□□ -0.63
SCFD1-205ENST00000469043 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
SCFD1-205ENST00000469043 KIAA1468Q9P260 1216 aa11.13□□□□□ -0.63
SCFD1-205ENST00000469043 E2F4Q16254 413 aa11.12□□□□□ -0.63
SCFD1-205ENST00000469043 PDIA6Q15084 440 aa11.1□□□□□ -0.63
SCFD1-205ENST00000469043 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
SCFD1-205ENST00000469043 NBR1Q14596 966 aa11.09□□□□□ -0.63
SCFD1-205ENST00000469043 TRIM6-TRIM34B2RNG4 842 aa11.08□□□□□ -0.64
SCFD1-205ENST00000469043 MAP3K7O43318 606 aa11.07□□□□□ -0.64
SCFD1-205ENST00000469043 EN1Q05925 392 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-205ENST00000469043 ZFRQ96KR1 1074 aaKnown RBP11.07□□□□□ -0.64
SCFD1-205ENST00000469043 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
SCFD1-205ENST00000469043 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-205ENST00000469043 BCAMP50895 628 aa11.04□□□□□ -0.64
SCFD1-205ENST00000469043 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
SCFD1-205ENST00000469043 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
SCFD1-205ENST00000469043 RGS20O76081 388 aa11.03□□□□□ -0.64
SCFD1-205ENST00000469043 FAM98CQ17RN3 349 aaKnown RBP11.03□□□□□ -0.64
SCFD1-205ENST00000469043 NYAP1Q6ZVC0 841 aa11.03□□□□□ -0.64
SCFD1-205ENST00000469043 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
SCFD1-205ENST00000469043 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
SCFD1-205ENST00000469043 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
SCFD1-205ENST00000469043 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-205ENST00000469043 A0A0G2JS52 829 aa10.98□□□□□ -0.65
SCFD1-205ENST00000469043 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
SCFD1-205ENST00000469043 CDCA7LQ96GN5 454 aa10.97□□□□□ -0.65
SCFD1-205ENST00000469043 WBP1LQ9NX94 342 aa10.97□□□□□ -0.65
SCFD1-205ENST00000469043 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
SCFD1-205ENST00000469043 ITGBL1O95965 494 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-205ENST00000469043 PRSS12P56730 875 aa10.96□□□□□ -0.65
SCFD1-205ENST00000469043 TSR3Q9UJK0 312 aaKnown RBP10.96□□□□□ -0.65
SCFD1-205ENST00000469043 HPS5Q9UPZ3 1129 aa10.94□□□□□ -0.66
SCFD1-205ENST00000469043 OSBPP22059 807 aa10.92□□□□□ -0.66
SCFD1-205ENST00000469043 KCNC4Q03721 635 aa10.92□□□□□ -0.66
SCFD1-205ENST00000469043 PPP4CP60510 307 aa10.91□□□□□ -0.66
SCFD1-205ENST00000469043 NBPF26B4DH59 902 aa10.9□□□□□ -0.66
SCFD1-205ENST00000469043 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
SCFD1-205ENST00000469043 HDGFP51858 240 aaKnown RBP10.9□□□□□ -0.66
SCFD1-205ENST00000469043 SMAPO00193 183 aa10.89□□□□□ -0.67
SCFD1-205ENST00000469043 TATDN2Q93075 761 aa10.89□□□□□ -0.67
SCFD1-205ENST00000469043 PNMA3Q9UL41 463 aa10.89□□□□□ -0.67
SCFD1-205ENST00000469043 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
SCFD1-205ENST00000469043 RBM27Q9P2N5 1060 aaKnown RBP10.87□□□□□ -0.67
SCFD1-205ENST00000469043 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
SCFD1-205ENST00000469043 IRX2Q9BZI1 471 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-205ENST00000469043 CDHR5Q9HBB8 845 aa10.85□□□□□ -0.67
SCFD1-205ENST00000469043 NUDT18Q6ZVK8 323 aa10.84□□□□□ -0.67
SCFD1-205ENST00000469043 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
SCFD1-205ENST00000469043 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
SCFD1-205ENST00000469043 C3orf80F5H4A9 247 aa10.8□□□□□ -0.68
SCFD1-205ENST00000469043 RNF40O75150 1001 aa10.79□□□□□ -0.68
SCFD1-205ENST00000469043 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
SCFD1-205ENST00000469043 NPDC1Q9NQX5 325 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-205ENST00000469043 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
SCFD1-205ENST00000469043 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
SCFD1-205ENST00000469043 TTC13Q8NBP0 860 aa10.77□□□□□ -0.69
SCFD1-205ENST00000469043 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
SCFD1-205ENST00000469043 SLF2Q8IX21 1173 aa10.75□□□□□ -0.69
SCFD1-205ENST00000469043 IL21Q9HBE4 155 aa10.75□□□□□ -0.69
SCFD1-205ENST00000469043 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-205ENST00000469043 KCNV2Q8TDN2 545 aa10.74□□□□□ -0.69
SCFD1-205ENST00000469043 MTRQ99707 1265 aa10.73□□□□□ -0.69
SCFD1-205ENST00000469043 SWT1Q5T5J6 900 aaKnown RBP10.72□□□□□ -0.69
SCFD1-205ENST00000469043 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
SCFD1-205ENST00000469043 EYA1Q99502 592 aa10.7□□□□□ -0.7
SCFD1-205ENST00000469043 APLP1P51693 650 aa10.69□□□□□ -0.7
SCFD1-205ENST00000469043 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
SCFD1-205ENST00000469043 PTGDRQ13258 359 aa10.67□□□□□ -0.7
SCFD1-205ENST00000469043 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
SCFD1-205ENST00000469043 PRR14Q9BWN1 585 aa10.66□□□□□ -0.7
SCFD1-205ENST00000469043 PPP1R18Q6NYC8 613 aa10.65□□□□□ -0.7
SCFD1-205ENST00000469043 ZNF516Q92618 1163 aa10.65□□□□□ -0.7
SCFD1-205ENST00000469043 DNAJB2P25686 324 aa10.64□□□□□ -0.71
SCFD1-205ENST00000469043 LAPTM4AQ15012 233 aa10.64□□□□□ -0.71
SCFD1-205ENST00000469043 Q6ZNB5 142 aa10.63□□□□□ -0.71
SCFD1-205ENST00000469043 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.63□□□□□ -0.71
SCFD1-205ENST00000469043 GGCXP38435 758 aa10.62□□□□□ -0.71
SCFD1-205ENST00000469043 COPS2P61201 443 aa10.62□□□□□ -0.71
SCFD1-205ENST00000469043 PRKD2Q9BZL6 878 aa10.62□□□□□ -0.71
SCFD1-205ENST00000469043 FCHSD2O94868 740 aa10.61□□□□□ -0.71
SCFD1-205ENST00000469043 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
SCFD1-205ENST00000469043 SEMA3EO15041 775 aa10.59□□□□□ -0.71
SCFD1-205ENST00000469043 NKX2-3Q8TAU0 364 aa10.59□□□□□ -0.71
SCFD1-205ENST00000469043 PCDHB3Q9Y5E6 796 aa10.59□□□□□ -0.71
SCFD1-205ENST00000469043 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms