RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 POTEBQ6S5H4 581 aa8.7□□□□□ -1.02
TRIM27-204ENST00000467742 DDX27Q96GQ7 796 aaKnown RBP8.7□□□□□ -1.02
TRIM27-204ENST00000467742 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
TRIM27-204ENST00000467742 ABCA5Q8WWZ7 1642 aa8.69□□□□□ -1.02
TRIM27-204ENST00000467742 VARS2Q5ST30 1063 aaKnown RBP8.68□□□□□ -1.02
TRIM27-204ENST00000467742 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.028e-10■■□□□ 12.4
TRIM27-204ENST00000467742 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
TRIM27-204ENST00000467742 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
TRIM27-204ENST00000467742 CHD1O14646 1710 aa8.67□□□□□ -1.02
TRIM27-204ENST00000467742 TBC1D12O60347 775 aa8.67□□□□□ -1.02
TRIM27-204ENST00000467742 NUDT7P0C024 238 aa8.67□□□□□ -1.02
TRIM27-204ENST00000467742 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
TRIM27-204ENST00000467742 LARP6Q9BRS8 491 aaKnown RBP8.67□□□□□ -1.02
TRIM27-204ENST00000467742 IFT140Q96RY7 1462 aa8.66□□□□□ -1.02
TRIM27-204ENST00000467742 WRNQ14191 1432 aaPredicted RBP eCLIP8.66□□□□□ -1.02
TRIM27-204ENST00000467742 SPNS2Q8IVW8 549 aa8.66□□□□□ -1.02
TRIM27-204ENST00000467742 KDM2AQ9Y2K7 1162 aa8.66□□□□□ -1.02
TRIM27-204ENST00000467742 OXER1Q8TDS5 423 aa8.65□□□□□ -1.02
TRIM27-204ENST00000467742 KDM4FA0A1W2PPD8 638 aa8.64□□□□□ -1.03
TRIM27-204ENST00000467742 ZNF687Q8N1G0 1237 aa8.64□□□□□ -1.03
TRIM27-204ENST00000467742 PSDA5PKW4 1024 aaPredicted RBP8.63□□□□□ -1.03
TRIM27-204ENST00000467742 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
TRIM27-204ENST00000467742 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
TRIM27-204ENST00000467742 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
TRIM27-204ENST00000467742 ABCA10Q8WWZ4 1543 aa8.61□□□□□ -1.03
TRIM27-204ENST00000467742 WDR70Q9NW82 654 aa8.6□□□□□ -1.03
TRIM27-204ENST00000467742 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.031e-10■■■■■ 30.9
TRIM27-204ENST00000467742 UPF1Q92900 1129 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRIM27-204ENST00000467742 SOGA1O94964 1423 aa8.59□□□□□ -1.03
TRIM27-204ENST00000467742 ADAMTS12P58397 1594 aa8.59□□□□□ -1.03
TRIM27-204ENST00000467742 CAMK2BQ13554 666 aa8.58□□□□□ -1.04
TRIM27-204ENST00000467742 PBX2P40425 430 aa8.57□□□□□ -1.04
TRIM27-204ENST00000467742 SNAPC4Q5SXM2 1469 aa8.57□□□□□ -1.04
TRIM27-204ENST00000467742 EMILIN3Q9NT22 766 aa8.56□□□□□ -1.04
TRIM27-204ENST00000467742 PPP4R3BQ5MIZ7 849 aa8.55□□□□□ -1.04
TRIM27-204ENST00000467742 P3H3Q8IVL6 736 aa8.55□□□□□ -1.04
TRIM27-204ENST00000467742 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
TRIM27-204ENST00000467742 GAPVD1Q14C86 1478 aa8.54□□□□□ -1.04
TRIM27-204ENST00000467742 EVI5O60447 810 aa8.53□□□□□ -1.04
TRIM27-204ENST00000467742 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
TRIM27-204ENST00000467742 BCANQ96GW7 911 aa8.53□□□□□ -1.04
TRIM27-204ENST00000467742 ANO8Q9HCE9 1232 aaPredicted RBP8.53□□□□□ -1.04
TRIM27-204ENST00000467742 GRIN2BQ13224 1484 aa8.52□□□□□ -1.05
TRIM27-204ENST00000467742 ERICH3Q5RHP9 1530 aa8.52□□□□□ -1.05
TRIM27-204ENST00000467742 CUL7Q14999 1698 aa8.52□□□□□ -1.05
TRIM27-204ENST00000467742 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
TRIM27-204ENST00000467742 JPH4Q96JJ6 628 aa8.51□□□□□ -1.05
TRIM27-204ENST00000467742 CLASP1Q7Z460 1538 aa8.5□□□□□ -1.05
TRIM27-204ENST00000467742 PTGER2P43116 358 aa8.5□□□□□ -1.05
TRIM27-204ENST00000467742 POTEEQ6S8J3 1075 aa8.5□□□□□ -1.05
TRIM27-204ENST00000467742 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
TRIM27-204ENST00000467742 CEP170Q5SW79 1584 aa8.49□□□□□ -1.05
TRIM27-204ENST00000467742 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
TRIM27-204ENST00000467742 FOSBP53539 338 aa8.49□□□□□ -1.05
TRIM27-204ENST00000467742 LSM11P83369 360 aaKnown RBP eCLIP8.49□□□□□ -1.058e-14■□□□□ 8
TRIM27-204ENST00000467742 ZNF454Q8N9F8 522 aa8.48□□□□□ -1.05
TRIM27-204ENST00000467742 SYNJ2O15056 1496 aa8.48□□□□□ -1.05
TRIM27-204ENST00000467742 DPYSL4O14531 572 aa8.47□□□□□ -1.05
TRIM27-204ENST00000467742 E2F4Q16254 413 aa8.47□□□□□ -1.05
TRIM27-204ENST00000467742 KCNH8Q96L42 1107 aa8.47□□□□□ -1.05
TRIM27-204ENST00000467742 ARIH1Q9Y4X5 557 aaPredicted RBP8.47□□□□□ -1.05
TRIM27-204ENST00000467742 GRIN2AQ12879 1464 aa8.46□□□□□ -1.05
TRIM27-204ENST00000467742 BCL2L12Q9HB09 334 aa8.46□□□□□ -1.06
TRIM27-204ENST00000467742 RIMBP3CA6NJZ7 1639 aa8.46□□□□□ -1.06
TRIM27-204ENST00000467742 RIMBP3BA6NNM3 1639 aa8.46□□□□□ -1.06
TRIM27-204ENST00000467742 RIMBP3Q9UFD9 1639 aa8.46□□□□□ -1.06
TRIM27-204ENST00000467742 CTTNBP2Q8WZ74 1663 aa8.46□□□□□ -1.06
TRIM27-204ENST00000467742 NBR1Q14596 966 aa8.45□□□□□ -1.06
TRIM27-204ENST00000467742 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
TRIM27-204ENST00000467742 SHROOM2Q13796 1616 aa8.44□□□□□ -1.06
TRIM27-204ENST00000467742 PDIA6Q15084 440 aa8.44□□□□□ -1.06
TRIM27-204ENST00000467742 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
TRIM27-204ENST00000467742 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
TRIM27-204ENST00000467742 TK2O00142 265 aa8.43□□□□□ -1.06
TRIM27-204ENST00000467742 PHF14O94880 888 aa8.43□□□□□ -1.06
TRIM27-204ENST00000467742 ANKRD13DQ6ZTN6 518 aa8.43□□□□□ -1.06
TRIM27-204ENST00000467742 ARHGEF1Q92888 912 aaKnown RBP8.43□□□□□ -1.06
TRIM27-204ENST00000467742 SPDYE16A6NNV3 312 aaPredicted RBP8.42□□□□□ -1.06
TRIM27-204ENST00000467742 PTPREP23469 700 aa8.42□□□□□ -1.06
TRIM27-204ENST00000467742 KCNV2Q8TDN2 545 aa8.42□□□□□ -1.06
TRIM27-204ENST00000467742 KCNK17Q96T54 332 aa8.42□□□□□ -1.06
TRIM27-204ENST00000467742 FHAD1B1AJZ9 1412 aa8.42□□□□□ -1.06
TRIM27-204ENST00000467742 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
TRIM27-204ENST00000467742 NUP160Q12769 1436 aa8.41□□□□□ -1.06
TRIM27-204ENST00000467742 PSEN2P49810 448 aa8.41□□□□□ -1.06
TRIM27-204ENST00000467742 ADGRD1Q6QNK2 874 aa8.41□□□□□ -1.06
TRIM27-204ENST00000467742 FBXW7Q969H0 707 aa8.41□□□□□ -1.06
TRIM27-204ENST00000467742 PCDHGA10Q9Y5H3 936 aa8.41□□□□□ -1.06
TRIM27-204ENST00000467742 ARHGEF11O15085 1522 aa8.4□□□□□ -1.06
TRIM27-204ENST00000467742 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
TRIM27-204ENST00000467742 TYW1BQ6NUM6 668 aa8.4□□□□□ -1.06
TRIM27-204ENST00000467742 EPAS1Q99814 870 aa8.4□□□□□ -1.06
TRIM27-204ENST00000467742 MYT1LQ9UL68 1186 aa8.4□□□□□ -1.06
TRIM27-204ENST00000467742 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
TRIM27-204ENST00000467742 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
TRIM27-204ENST00000467742 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
TRIM27-204ENST00000467742 IGF1RP08069 1367 aa8.38□□□□□ -1.07
TRIM27-204ENST00000467742 KIF21BO75037 1637 aa8.37□□□□□ -1.07
TRIM27-204ENST00000467742 IQGAP2Q13576 1575 aa8.36□□□□□ -1.07
TRIM27-204ENST00000467742 HRO43593 1189 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms