RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TYW1BQ6NUM6 668 aa9.71□□□□□ -0.86
SSR3-204ENST00000467733 ANKK1Q8NFD2 765 aa9.7□□□□□ -0.86
SSR3-204ENST00000467733 A0A0G2JS52 829 aa9.69□□□□□ -0.86
SSR3-204ENST00000467733 LAPTM4BQ86VI4 370 aa9.68□□□□□ -0.86
SSR3-204ENST00000467733 PROX2Q3B8N5 592 aa9.66□□□□□ -0.86
SSR3-204ENST00000467733 EPAS1Q99814 870 aa9.66□□□□□ -0.86
SSR3-204ENST00000467733 COL9A1P20849 921 aa9.65□□□□□ -0.86
SSR3-204ENST00000467733 CAMK2BQ13554 666 aa9.65□□□□□ -0.86
SSR3-204ENST00000467733 NYAP1Q6ZVC0 841 aa9.65□□□□□ -0.86
SSR3-204ENST00000467733 ONECUT3O60422 494 aaPredicted RBP9.64□□□□□ -0.87
SSR3-204ENST00000467733 CADPS2Q86UW7 1296 aa9.64□□□□□ -0.87
SSR3-204ENST00000467733 ITGBL1O95965 494 aaPredicted RBP9.62□□□□□ -0.87
SSR3-204ENST00000467733 SOWAHBA6NEL2 793 aa9.61□□□□□ -0.87
SSR3-204ENST00000467733 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
SSR3-204ENST00000467733 DPYSL4O14531 572 aa9.6□□□□□ -0.87
SSR3-204ENST00000467733 C6orf132Q5T0Z8 1188 aa9.6□□□□□ -0.87
SSR3-204ENST00000467733 KIAA1468Q9P260 1216 aa9.6□□□□□ -0.87
SSR3-204ENST00000467733 BCAMP50895 628 aa9.59□□□□□ -0.87
SSR3-204ENST00000467733 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
SSR3-204ENST00000467733 TRIM6-TRIM34B2RNG4 842 aa9.57□□□□□ -0.88
SSR3-204ENST00000467733 FAM98CQ17RN3 349 aaKnown RBP9.56□□□□□ -0.88
SSR3-204ENST00000467733 SEPT9Q9UHD8 586 aaPredicted RBP9.55□□□□□ -0.88
SSR3-204ENST00000467733 KCNC4Q03721 635 aa9.53□□□□□ -0.88
SSR3-204ENST00000467733 DDX12PQ92771 950 aa9.53□□□□□ -0.88
SSR3-204ENST00000467733 RBM33Q96EV2 1170 aaKnown RBP9.53□□□□□ -0.88
SSR3-204ENST00000467733 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
SSR3-204ENST00000467733 EN1Q05925 392 aaPredicted RBP9.52□□□□□ -0.89
SSR3-204ENST00000467733 PDIA6Q15084 440 aa9.52□□□□□ -0.89
SSR3-204ENST00000467733 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
SSR3-204ENST00000467733 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
SSR3-204ENST00000467733 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
SSR3-204ENST00000467733 TSR3Q9UJK0 312 aaKnown RBP9.52□□□□□ -0.89
SSR3-204ENST00000467733 NBR1Q14596 966 aa9.51□□□□□ -0.89
SSR3-204ENST00000467733 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
SSR3-204ENST00000467733 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
SSR3-204ENST00000467733 MAP3K7O43318 606 aa9.49□□□□□ -0.89
SSR3-204ENST00000467733 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
SSR3-204ENST00000467733 CERKQ8TCT0 537 aa9.46□□□□□ -0.9
SSR3-204ENST00000467733 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.9
SSR3-204ENST00000467733 TSR1Q2NL82 804 aaKnown RBP9.45□□□□□ -0.9
SSR3-204ENST00000467733 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
SSR3-204ENST00000467733 PPP4CP60510 307 aa9.42□□□□□ -0.9
SSR3-204ENST00000467733 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
SSR3-204ENST00000467733 CDCA7LQ96GN5 454 aa9.42□□□□□ -0.9
SSR3-204ENST00000467733 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
SSR3-204ENST00000467733 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
SSR3-204ENST00000467733 NBPF26B4DH59 902 aa9.41□□□□□ -0.9
SSR3-204ENST00000467733 PRSS12P56730 875 aa9.41□□□□□ -0.9
SSR3-204ENST00000467733 E2F4Q16254 413 aa9.41□□□□□ -0.9
SSR3-204ENST00000467733 LAPTM4AQ15012 233 aa9.4□□□□□ -0.9
SSR3-204ENST00000467733 Q6ZNB5 142 aa9.39□□□□□ -0.91
SSR3-204ENST00000467733 SAMD7Q7Z3H4 446 aa9.38□□□□□ -0.91
SSR3-204ENST00000467733 WDR70Q9NW82 654 aa9.38□□□□□ -0.91
SSR3-204ENST00000467733 RBM27Q9P2N5 1060 aaKnown RBP9.38□□□□□ -0.91
SSR3-204ENST00000467733 GRXCR2A6NFK2 248 aa9.35□□□□□ -0.91
SSR3-204ENST00000467733 SMAPO00193 183 aa9.35□□□□□ -0.91
SSR3-204ENST00000467733 HDGFP51858 240 aaKnown RBP9.35□□□□□ -0.91
SSR3-204ENST00000467733 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
SSR3-204ENST00000467733 TATDN2Q93075 761 aa9.35□□□□□ -0.91
SSR3-204ENST00000467733 PNMA3Q9UL41 463 aa9.35□□□□□ -0.91
SSR3-204ENST00000467733 TJAP1Q5JTD0 557 aa9.34□□□□□ -0.91
SSR3-204ENST00000467733 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
SSR3-204ENST00000467733 FAM198AQ9UFP1 575 aa9.34□□□□□ -0.91
SSR3-204ENST00000467733 MTRQ99707 1265 aa9.32□□□□□ -0.92
SSR3-204ENST00000467733 NACADO15069 1562 aa9.32□□□□□ -0.92
SSR3-204ENST00000467733 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
SSR3-204ENST00000467733 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
SSR3-204ENST00000467733 RNF40O75150 1001 aa9.3□□□□□ -0.92
SSR3-204ENST00000467733 OSBPP22059 807 aa9.3□□□□□ -0.92
SSR3-204ENST00000467733 NUDT18Q6ZVK8 323 aa9.3□□□□□ -0.92
SSR3-204ENST00000467733 AMER1Q5JTC6 1135 aaPredicted RBP9.29□□□□□ -0.92
SSR3-204ENST00000467733 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
SSR3-204ENST00000467733 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
SSR3-204ENST00000467733 GFRA3O60609 400 aa9.27□□□□□ -0.93
SSR3-204ENST00000467733 SLC4A3P48751 1232 aa9.27□□□□□ -0.93
SSR3-204ENST00000467733 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
SSR3-204ENST00000467733 SLF2Q8IX21 1173 aa9.27□□□□□ -0.93
SSR3-204ENST00000467733 CFAP44Q96MT7 982 aa9.27□□□□□ -0.93
SSR3-204ENST00000467733 PRKD2Q9BZL6 878 aa9.27□□□□□ -0.93
SSR3-204ENST00000467733 V9GY48 417 aaPredicted RBP9.27□□□□□ -0.93
SSR3-204ENST00000467733 PPP1R18Q6NYC8 613 aa9.26□□□□□ -0.93
SSR3-204ENST00000467733 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
SSR3-204ENST00000467733 NRG2O14511 850 aaPredicted RBP9.25□□□□□ -0.93
SSR3-204ENST00000467733 APLP1P51693 650 aa9.25□□□□□ -0.93
SSR3-204ENST00000467733 GGCXP38435 758 aa9.24□□□□□ -0.93
SSR3-204ENST00000467733 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.24□□□□□ -0.93
SSR3-204ENST00000467733 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
SSR3-204ENST00000467733 PADI6Q6TGC4 694 aa9.23□□□□□ -0.93
SSR3-204ENST00000467733 PRR14Q9BWN1 585 aa9.23□□□□□ -0.93
SSR3-204ENST00000467733 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
SSR3-204ENST00000467733 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
SSR3-204ENST00000467733 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
SSR3-204ENST00000467733 BICRAQ9NZM4 1560 aa9.2□□□□□ -0.94
SSR3-204ENST00000467733 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
SSR3-204ENST00000467733 RTN4Q9NQC3 1192 aaKnown RBP9.18□□□□□ -0.94
SSR3-204ENST00000467733 COPS2P61201 443 aa9.17□□□□□ -0.94
SSR3-204ENST00000467733 LCE2BO14633 110 aa9.16□□□□□ -0.94
SSR3-204ENST00000467733 EYA1Q99502 592 aa9.16□□□□□ -0.94
SSR3-204ENST00000467733 ZPR1O75312 459 aa9.15□□□□□ -0.94
SSR3-204ENST00000467733 NKX2-3Q8TAU0 364 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms