RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ZNF687Q8N1G0 1237 aa6.08□□□□□ -1.44
SORT1-202ENST00000466471 CFTRP13569 1480 aa6.08□□□□□ -1.44
SORT1-202ENST00000466471 TARBP1Q13395 1621 aaKnown RBP6.07□□□□□ -1.44
SORT1-202ENST00000466471 DIP2BQ9P265 1576 aa6.07□□□□□ -1.44
SORT1-202ENST00000466471 C2orf72A6NCS6 295 aa6.06□□□□□ -1.44
SORT1-202ENST00000466471 CHGAP10645 457 aaKnown RBP6.06□□□□□ -1.44
SORT1-202ENST00000466471 RNF166Q96A37 237 aaPredicted RBP6.06□□□□□ -1.44
SORT1-202ENST00000466471 ABCC10Q5T3U5 1492 aa6.06□□□□□ -1.44
SORT1-202ENST00000466471 TMEM132AQ24JP5 1023 aa6.05□□□□□ -1.44
SORT1-202ENST00000466471 GTF3C3Q9Y5Q9 886 aa6.05□□□□□ -1.44
SORT1-202ENST00000466471 ZNF316A6NFI3 1004 aaPredicted RBP6.04□□□□□ -1.44
SORT1-202ENST00000466471 ANKRD13DQ6ZTN6 518 aa6.04□□□□□ -1.44
SORT1-202ENST00000466471 MYT1LQ9UL68 1186 aa6.04□□□□□ -1.44
SORT1-202ENST00000466471 TIMELESSQ9UNS1 1208 aa6.04□□□□□ -1.44
SORT1-202ENST00000466471 KIF3CO14782 793 aa6.03□□□□□ -1.44
SORT1-202ENST00000466471 DAXXQ9UER7 740 aaPredicted RBP6.03□□□□□ -1.44
SORT1-202ENST00000466471 MAPKBP1O60336 1514 aa6.03□□□□□ -1.44
SORT1-202ENST00000466471 AQRO60306 1485 aaKnown RBP eCLIP6.02□□□□□ -1.443e-6■■■□□ 16.5
SORT1-202ENST00000466471 NUDT7P0C024 238 aa6.02□□□□□ -1.45
SORT1-202ENST00000466471 TOPBP1Q92547 1522 aa6.02□□□□□ -1.45
SORT1-202ENST00000466471 WDR97A6NE52 1622 aa6.02□□□□□ -1.45
SORT1-202ENST00000466471 TULP1O00294 542 aaPredicted RBP6.01□□□□□ -1.45
SORT1-202ENST00000466471 PPP1R37O75864 691 aa6.01□□□□□ -1.45
SORT1-202ENST00000466471 RYDENQ9NUL5 291 aaKnown RBP6.01□□□□□ -1.45
SORT1-202ENST00000466471 TOP2BQ02880 1626 aa6□□□□□ -1.45
SORT1-202ENST00000466471 TMC2Q8TDI7 906 aa6□□□□□ -1.45
SORT1-202ENST00000466471 SNAPC4Q5SXM2 1469 aa6□□□□□ -1.45
SORT1-202ENST00000466471 TSPOAP1O95153 1857 aa6□□□□□ -1.45
SORT1-202ENST00000466471 MROH2BQ7Z745 1585 aa5.99□□□□□ -1.45
SORT1-202ENST00000466471 MAGI1Q96QZ7 1491 aaPredicted RBP5.99□□□□□ -1.45
SORT1-202ENST00000466471 LSM11P83369 360 aaKnown RBP eCLIP5.99□□□□□ -1.45
SORT1-202ENST00000466471 LHX6Q9UPM6 363 aa5.99□□□□□ -1.45
SORT1-202ENST00000466471 PCDHGA4Q9Y5G9 962 aa5.99□□□□□ -1.45
SORT1-202ENST00000466471 AXIN2Q9Y2T1 843 aa5.98□□□□□ -1.45
SORT1-202ENST00000466471 DNMBPQ6XZF7 1577 aa5.97□□□□□ -1.45
SORT1-202ENST00000466471 P3H3Q8IVL6 736 aa5.97□□□□□ -1.45
SORT1-202ENST00000466471 PPRC1Q5VV67 1664 aaKnown RBP5.97□□□□□ -1.45
SORT1-202ENST00000466471 SHROOM2Q13796 1616 aa5.96□□□□□ -1.45
SORT1-202ENST00000466471 SLC34A2O95436 690 aa5.96□□□□□ -1.46
SORT1-202ENST00000466471 PTGER2P43116 358 aa5.96□□□□□ -1.46
SORT1-202ENST00000466471 POTEEQ6S8J3 1075 aa5.96□□□□□ -1.46
SORT1-202ENST00000466471 ABCC8Q09428 1581 aa5.96□□□□□ -1.46
SORT1-202ENST00000466471 CEP170Q5SW79 1584 aa5.95□□□□□ -1.46
SORT1-202ENST00000466471 PCF11O94913 1555 aaKnown RBP5.94□□□□□ -1.46
SORT1-202ENST00000466471 FAM69CQ0P6D2 419 aa5.94□□□□□ -1.46
SORT1-202ENST00000466471 GTPBP6O43824 516 aaPredicted RBP5.93□□□□□ -1.46
SORT1-202ENST00000466471 PBX2P40425 430 aa5.93□□□□□ -1.46
SORT1-202ENST00000466471 HOMEZQ8IX15 550 aa5.93□□□□□ -1.46
SORT1-202ENST00000466471 CERKQ8TCT0 537 aa5.92□□□□□ -1.46
SORT1-202ENST00000466471 POLA1P09884 1462 aaPredicted RBP5.91□□□□□ -1.46
SORT1-202ENST00000466471 PLPP6Q8IY26 295 aa5.91□□□□□ -1.46
SORT1-202ENST00000466471 NKX1-1Q15270 411 aaPredicted RBP5.9□□□□□ -1.46
SORT1-202ENST00000466471 PTCD2Q8WV60 388 aaKnown RBP5.9□□□□□ -1.46
SORT1-202ENST00000466471 PBRM1Q86U86 1689 aa5.9□□□□□ -1.47
SORT1-202ENST00000466471 ADCY10Q96PN6 1610 aa5.89□□□□□ -1.47
SORT1-202ENST00000466471 ARHGAP33O14559 1287 aa5.89□□□□□ -1.47
SORT1-202ENST00000466471 FOXK1P85037 733 aa5.89□□□□□ -1.47
SORT1-202ENST00000466471 DSG2Q14126 1118 aa5.89□□□□□ -1.47
SORT1-202ENST00000466471 CHMP7Q8WUX9 453 aaPredicted RBP5.89□□□□□ -1.47
SORT1-202ENST00000466471 GPHNQ9NQX3 736 aaPredicted RBP5.89□□□□□ -1.47
SORT1-202ENST00000466471 GRIN2BQ13224 1484 aa5.89□□□□□ -1.47
SORT1-202ENST00000466471 WIZO95785 1651 aa5.88□□□□□ -1.47
SORT1-202ENST00000466471 PSEN2P49810 448 aa5.88□□□□□ -1.47
SORT1-202ENST00000466471 DMRTA1Q5VZB9 504 aa5.88□□□□□ -1.47
SORT1-202ENST00000466471 ADGRD1Q6QNK2 874 aa5.88□□□□□ -1.47
SORT1-202ENST00000466471 COL17A1Q9UMD9 1497 aaPredicted RBP5.88□□□□□ -1.47
SORT1-202ENST00000466471 PSDA5PKW4 1024 aaPredicted RBP5.87□□□□□ -1.47
SORT1-202ENST00000466471 GLI2P10070 1586 aa5.87□□□□□ -1.47
SORT1-202ENST00000466471 ADAMTSL3P82987 1691 aa5.87□□□□□ -1.47
SORT1-202ENST00000466471 C14orf37Q86TY3 774 aa5.86□□□□□ -1.47
SORT1-202ENST00000466471 SRCAPQ6ZRS2 3230 aa5.86□□□□□ -1.47
SORT1-202ENST00000466471 PTPRMP28827 1452 aa5.85□□□□□ -1.47
SORT1-202ENST00000466471 NUP160Q12769 1436 aa5.85□□□□□ -1.47
SORT1-202ENST00000466471 TDRD9Q8NDG6 1382 aaKnown RBP5.85□□□□□ -1.47
SORT1-202ENST00000466471 TBC1D12O60347 775 aa5.85□□□□□ -1.47
SORT1-202ENST00000466471 PPP4R3BQ5MIZ7 849 aa5.85□□□□□ -1.47
SORT1-202ENST00000466471 UPF1Q92900 1129 aaKnown RBP eCLIP5.85□□□□□ -1.47
SORT1-202ENST00000466471 HCSTQ9UBK5 93 aa5.85□□□□□ -1.47
SORT1-202ENST00000466471 RAD54L2Q9Y4B4 1467 aa5.84□□□□□ -1.47
SORT1-202ENST00000466471 KCNK17Q96T54 332 aa5.84□□□□□ -1.47
SORT1-202ENST00000466471 PLA2G2EQ9NZK7 142 aa5.84□□□□□ -1.47
SORT1-202ENST00000466471 KIF21BO75037 1637 aa5.84□□□□□ -1.47
SORT1-202ENST00000466471 MED1Q15648 1581 aaPredicted RBP5.84□□□□□ -1.48
SORT1-202ENST00000466471 TK2O00142 265 aa5.83□□□□□ -1.48
SORT1-202ENST00000466471 HRO43593 1189 aa5.83□□□□□ -1.48
SORT1-202ENST00000466471 GRIN2AQ12879 1464 aa5.83□□□□□ -1.48
SORT1-202ENST00000466471 MAP3K4Q9Y6R4 1608 aa5.82□□□□□ -1.48
SORT1-202ENST00000466471 KCTD12Q96CX2 325 aaKnown RBP5.82□□□□□ -1.48
SORT1-202ENST00000466471 STAC3Q96MF2 364 aa5.82□□□□□ -1.48
SORT1-202ENST00000466471 IQSEC2Q5JU85 1478 aa5.82□□□□□ -1.48
SORT1-202ENST00000466471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.81□□□□□ -1.48
SORT1-202ENST00000466471 OXER1Q8TDS5 423 aa5.81□□□□□ -1.48
SORT1-202ENST00000466471 ABCA5Q8WWZ7 1642 aa5.81□□□□□ -1.48
SORT1-202ENST00000466471 TOP2AP11388 1531 aaKnown RBP5.8□□□□□ -1.48
SORT1-202ENST00000466471 LMOD2Q6P5Q4 547 aa5.8□□□□□ -1.48
SORT1-202ENST00000466471 ZNF454Q8N9F8 522 aa5.8□□□□□ -1.48
SORT1-202ENST00000466471 CRISPLD2Q9H0B8 497 aa5.8□□□□□ -1.48
SORT1-202ENST00000466471 WDR70Q9NW82 654 aa5.8□□□□□ -1.48
SORT1-202ENST00000466471 SOGA1O94964 1423 aa5.8□□□□□ -1.48
SORT1-202ENST00000466471 ADAMTS12P58397 1594 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms