RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ADAM33Q9BZ11 813 aa4.59□□□□□ -1.67
NUCKS1-202ENST00000464938 PDE4AP27815 886 aa4.58□□□□□ -1.68
NUCKS1-202ENST00000464938 ARIH1Q9Y4X5 557 aaPredicted RBP4.58□□□□□ -1.68
NUCKS1-202ENST00000464938 CAMK2BQ13554 666 aa4.57□□□□□ -1.68
NUCKS1-202ENST00000464938 P3H3Q8IVL6 736 aa4.57□□□□□ -1.68
NUCKS1-202ENST00000464938 KCNV2Q8TDN2 545 aa4.57□□□□□ -1.68
NUCKS1-202ENST00000464938 ARHGEF1Q92888 912 aaKnown RBP4.57□□□□□ -1.68
NUCKS1-202ENST00000464938 NBPF3Q9H094 633 aa4.57□□□□□ -1.68
NUCKS1-202ENST00000464938 WDR70Q9NW82 654 aa4.57□□□□□ -1.68
NUCKS1-202ENST00000464938 GOLGA8CPA6NN73 597 aa4.56□□□□□ -1.68
NUCKS1-202ENST00000464938 E2F4Q16254 413 aa4.56□□□□□ -1.68
NUCKS1-202ENST00000464938 UPF1Q92900 1129 aaKnown RBP eCLIP4.56□□□□□ -1.68
NUCKS1-202ENST00000464938 LARP6Q9BRS8 491 aaKnown RBP4.56□□□□□ -1.68
NUCKS1-202ENST00000464938 RABGEF1Q9UJ41 708 aa4.56□□□□□ -1.68
NUCKS1-202ENST00000464938 SOWAHBA6NEL2 793 aa4.55□□□□□ -1.68
NUCKS1-202ENST00000464938 BCAMP50895 628 aa4.55□□□□□ -1.68
NUCKS1-202ENST00000464938 NBR1Q14596 966 aa4.55□□□□□ -1.68
NUCKS1-202ENST00000464938 ZDHHC16Q969W1 377 aa4.55□□□□□ -1.68
NUCKS1-202ENST00000464938 PPP1R3GB7ZBB8 358 aa4.54□□□□□ -1.68
NUCKS1-202ENST00000464938 COL9A1P20849 921 aa4.54□□□□□ -1.68
NUCKS1-202ENST00000464938 LAPTM4AQ15012 233 aa4.54□□□□□ -1.68
NUCKS1-202ENST00000464938 PROX2Q3B8N5 592 aa4.54□□□□□ -1.68
NUCKS1-202ENST00000464938 DDX27Q96GQ7 796 aaKnown RBP4.54□□□□□ -1.68
NUCKS1-202ENST00000464938 PPP1R15BQ5SWA1 713 aa4.53□□□□□ -1.68
NUCKS1-202ENST00000464938 TRAF7Q6Q0C0 670 aa4.53□□□□□ -1.68
NUCKS1-202ENST00000464938 NYAP1Q6ZVC0 841 aa4.53□□□□□ -1.68
NUCKS1-202ENST00000464938 LAPTM4BQ86VI4 370 aa4.53□□□□□ -1.68
NUCKS1-202ENST00000464938 ANKK1Q8NFD2 765 aa4.53□□□□□ -1.68
NUCKS1-202ENST00000464938 WBP1LQ9NX94 342 aa4.53□□□□□ -1.68
NUCKS1-202ENST00000464938 EVI5O60447 810 aa4.52□□□□□ -1.69
NUCKS1-202ENST00000464938 PRKCSHP14314 528 aaPredicted RBP4.51□□□□□ -1.69
NUCKS1-202ENST00000464938 KCNC4Q03721 635 aa4.51□□□□□ -1.69
NUCKS1-202ENST00000464938 ZFRQ96KR1 1074 aaKnown RBP4.51□□□□□ -1.69
NUCKS1-202ENST00000464938 PCDHGA10Q9Y5H3 936 aa4.51□□□□□ -1.69
NUCKS1-202ENST00000464938 TESPA1A2RU30 521 aaPredicted RBP4.5□□□□□ -1.69
NUCKS1-202ENST00000464938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.5□□□□□ -1.69
NUCKS1-202ENST00000464938 EMILIN3Q9NT22 766 aa4.5□□□□□ -1.69
NUCKS1-202ENST00000464938 NRG2O14511 850 aaPredicted RBP4.49□□□□□ -1.69
NUCKS1-202ENST00000464938 ONECUT3O60422 494 aaPredicted RBP4.49□□□□□ -1.69
NUCKS1-202ENST00000464938 GFRA3O60609 400 aa4.49□□□□□ -1.69
NUCKS1-202ENST00000464938 TPRNQ4KMQ1 711 aa4.49□□□□□ -1.69
NUCKS1-202ENST00000464938 SEMA3EO15041 775 aa4.47□□□□□ -1.69
NUCKS1-202ENST00000464938 KIAA1468Q9P260 1216 aa4.47□□□□□ -1.69
NUCKS1-202ENST00000464938 SPDYE16A6NNV3 312 aaPredicted RBP4.46□□□□□ -1.7
NUCKS1-202ENST00000464938 PDIA6Q15084 440 aa4.46□□□□□ -1.7
NUCKS1-202ENST00000464938 TJAP1Q5JTD0 557 aa4.46□□□□□ -1.7
NUCKS1-202ENST00000464938 FBXW7Q969H0 707 aa4.46□□□□□ -1.7
NUCKS1-202ENST00000464938 ZNF775Q96BV0 537 aaPredicted RBP4.46□□□□□ -1.7
NUCKS1-202ENST00000464938 SEPT9Q9UHD8 586 aaPredicted RBP4.46□□□□□ -1.7
NUCKS1-202ENST00000464938 V9GY48 417 aaPredicted RBP4.46□□□□□ -1.7
NUCKS1-202ENST00000464938 TRIM6-TRIM34B2RNG4 842 aa4.45□□□□□ -1.7
NUCKS1-202ENST00000464938 PHF14O94880 888 aa4.45□□□□□ -1.7
NUCKS1-202ENST00000464938 FAM98CQ17RN3 349 aaKnown RBP4.45□□□□□ -1.7
NUCKS1-202ENST00000464938 TYW1BQ6NUM6 668 aa4.45□□□□□ -1.7
NUCKS1-202ENST00000464938 PRKD2Q9BZL6 878 aa4.45□□□□□ -1.7
NUCKS1-202ENST00000464938 TSR3Q9UJK0 312 aaKnown RBP4.45□□□□□ -1.7
NUCKS1-202ENST00000464938 DPYSL4O14531 572 aa4.44□□□□□ -1.7
NUCKS1-202ENST00000464938 LMOD2Q6P5Q4 547 aa4.44□□□□□ -1.7
NUCKS1-202ENST00000464938 HPS5Q9UPZ3 1129 aa4.44□□□□□ -1.7
NUCKS1-202ENST00000464938 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.43□□□□□ -1.7
NUCKS1-202ENST00000464938 MLLT3P42568 568 aaPredicted RBP4.42□□□□□ -1.7
NUCKS1-202ENST00000464938 MAP3K9P80192 1104 aa4.42□□□□□ -1.7
NUCKS1-202ENST00000464938 C6orf132Q5T0Z8 1188 aa4.42□□□□□ -1.7
NUCKS1-202ENST00000464938 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
NUCKS1-202ENST00000464938 ZNF787Q6DD87 383 aa4.42□□□□□ -1.7
NUCKS1-202ENST00000464938 PPP1R18Q6NYC8 613 aa4.42□□□□□ -1.7
NUCKS1-202ENST00000464938 LRCH3Q96II8 777 aa4.42□□□□□ -1.7
NUCKS1-202ENST00000464938 SMYD5Q6GMV2 418 aa4.41□□□□□ -1.7
NUCKS1-202ENST00000464938 TSKSQ9UJT2 592 aa4.41□□□□□ -1.7
NUCKS1-202ENST00000464938 TULP1O00294 542 aaPredicted RBP4.4□□□□□ -1.71
NUCKS1-202ENST00000464938 TRIM67Q6ZTA4 783 aa4.4□□□□□ -1.71
NUCKS1-202ENST00000464938 ZC3H15Q8WU90 426 aaKnown RBP4.4□□□□□ -1.71
NUCKS1-202ENST00000464938 MTRQ99707 1265 aa4.4□□□□□ -1.71
NUCKS1-202ENST00000464938 EPAS1Q99814 870 aa4.4□□□□□ -1.71
NUCKS1-202ENST00000464938 ZMYND10O75800 440 aa4.39□□□□□ -1.71
NUCKS1-202ENST00000464938 OSBPP22059 807 aa4.38□□□□□ -1.71
NUCKS1-202ENST00000464938 ZNF516Q92618 1163 aa4.38□□□□□ -1.71
NUCKS1-202ENST00000464938 EMID1Q96A84 441 aaPredicted RBP4.38□□□□□ -1.71
NUCKS1-202ENST00000464938 IL21Q9HBE4 155 aa4.38□□□□□ -1.71
NUCKS1-202ENST00000464938 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.38□□□□□ -1.71
NUCKS1-202ENST00000464938 PDZRN3Q9UPQ7 1066 aa4.38□□□□□ -1.71
NUCKS1-202ENST00000464938 C3orf80F5H4A9 247 aa4.37□□□□□ -1.71
NUCKS1-202ENST00000464938 GPR37O15354 613 aa4.37□□□□□ -1.71
NUCKS1-202ENST00000464938 PRIM1P49642 420 aaKnown RBP4.37□□□□□ -1.71
NUCKS1-202ENST00000464938 RBM26Q5T8P6 1007 aaKnown RBP4.37□□□□□ -1.71
NUCKS1-202ENST00000464938 BARGINQ6ZT62 677 aa4.37□□□□□ -1.71
NUCKS1-202ENST00000464938 FAM198AQ9UFP1 575 aa4.37□□□□□ -1.71
NUCKS1-202ENST00000464938 POTECB2RU33 542 aa4.36□□□□□ -1.71
NUCKS1-202ENST00000464938 SAMD7Q7Z3H4 446 aa4.36□□□□□ -1.71
NUCKS1-202ENST00000464938 APLP1P51693 650 aa4.35□□□□□ -1.71
NUCKS1-202ENST00000464938 PPP4CP60510 307 aa4.35□□□□□ -1.71
NUCKS1-202ENST00000464938 MYT1Q01538 1121 aa4.35□□□□□ -1.71
NUCKS1-202ENST00000464938 EN1Q05925 392 aaPredicted RBP4.35□□□□□ -1.71
NUCKS1-202ENST00000464938 TSR1Q2NL82 804 aaKnown RBP4.35□□□□□ -1.71
NUCKS1-202ENST00000464938 NKX2-3Q8TAU0 364 aa4.35□□□□□ -1.71
NUCKS1-202ENST00000464938 GRXCR2A6NFK2 248 aa4.33□□□□□ -1.72
NUCKS1-202ENST00000464938 SMAPO00193 183 aa4.33□□□□□ -1.72
NUCKS1-202ENST00000464938 PACS2Q86VP3 889 aa4.33□□□□□ -1.72
NUCKS1-202ENST00000464938 GPIHBP1Q8IV16 184 aa4.33□□□□□ -1.72
NUCKS1-202ENST00000464938 DDX12PQ92771 950 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms