RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 SETD1BQ9UPS6 1966 aaKnown RBP15.58■□□□□ 0.08
TNRC6A-205ENST00000464539 UBE2Q2Q8WVN8 375 aa15.57■□□□□ 0.08
TNRC6A-205ENST00000464539 CNTLNQ9NXG0 1405 aa15.57■□□□□ 0.08
TNRC6A-205ENST00000464539 RNF123Q5XPI4 1314 aa15.56■□□□□ 0.08
TNRC6A-205ENST00000464539 SMG6Q86US8 1419 aaKnown RBP15.55■□□□□ 0.08
TNRC6A-205ENST00000464539 NCOA1Q15788 1441 aa15.53■□□□□ 0.08
TNRC6A-205ENST00000464539 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
TNRC6A-205ENST00000464539 ZNF518AQ6AHZ1 1483 aa15.53■□□□□ 0.08
TNRC6A-205ENST00000464539 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
TNRC6A-205ENST00000464539 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.08
TNRC6A-205ENST00000464539 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.08
TNRC6A-205ENST00000464539 EIF4G2P78344 907 aaKnown RBP eCLIP15.52■□□□□ 0.07
TNRC6A-205ENST00000464539 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
TNRC6A-205ENST00000464539 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
TNRC6A-205ENST00000464539 CCDC18Q5T9S5 1454 aa15.51■□□□□ 0.07
TNRC6A-205ENST00000464539 HSPA5P11021 654 aaKnown RBP15.51■□□□□ 0.07
TNRC6A-205ENST00000464539 REREQ9P2R6 1566 aa15.51■□□□□ 0.07
TNRC6A-205ENST00000464539 PPM1GO15355 546 aaPredicted RBP15.5■□□□□ 0.07
TNRC6A-205ENST00000464539 C3P01024 1663 aa15.5■□□□□ 0.07
TNRC6A-205ENST00000464539 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
TNRC6A-205ENST00000464539 ESF1Q9H501 851 aaKnown RBP15.5■□□□□ 0.07
TNRC6A-205ENST00000464539 KDM5CP41229 1560 aa15.49■□□□□ 0.07
TNRC6A-205ENST00000464539 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
TNRC6A-205ENST00000464539 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
TNRC6A-205ENST00000464539 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
TNRC6A-205ENST00000464539 DIP2CQ9Y2E4 1556 aa15.47■□□□□ 0.07
TNRC6A-205ENST00000464539 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
TNRC6A-205ENST00000464539 FAM9BQ8IZU0 186 aa15.47■□□□□ 0.07
TNRC6A-205ENST00000464539 NUDCQ9Y266 331 aa15.46■□□□□ 0.07
TNRC6A-205ENST00000464539 AGLP35573 1532 aa15.46■□□□□ 0.07
TNRC6A-205ENST00000464539 CCDC184Q52MB2 194 aa15.46■□□□□ 0.06
TNRC6A-205ENST00000464539 FYCO1Q9BQS8 1478 aa15.45■□□□□ 0.06
TNRC6A-205ENST00000464539 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
TNRC6A-205ENST00000464539 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
TNRC6A-205ENST00000464539 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
TNRC6A-205ENST00000464539 PTPN23Q9H3S7 1636 aa15.44■□□□□ 0.06
TNRC6A-205ENST00000464539 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
TNRC6A-205ENST00000464539 CAMSAP1Q5T5Y3 1602 aa15.44■□□□□ 0.06
TNRC6A-205ENST00000464539 MLH3Q9UHC1 1453 aa15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 NPATQ14207 1427 aa15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 ZNF335Q9H4Z2 1342 aaPredicted RBP15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 ARHGAP5Q13017 1502 aa15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 CASKIN1Q8WXD9 1431 aa15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 NEFMP07197 916 aa15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 MS4A1P11836 297 aa15.42■□□□□ 0.06
TNRC6A-205ENST00000464539 ABCA6Q8N139 1617 aa15.41■□□□□ 0.06
TNRC6A-205ENST00000464539 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
TNRC6A-205ENST00000464539 NAIPQ13075 1403 aa15.4■□□□□ 0.06
TNRC6A-205ENST00000464539 KIF14Q15058 1648 aa15.4■□□□□ 0.06
TNRC6A-205ENST00000464539 PKD2Q13563 968 aa15.39■□□□□ 0.05
TNRC6A-205ENST00000464539 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
TNRC6A-205ENST00000464539 PLA2R1Q13018 1463 aa15.38■□□□□ 0.05
TNRC6A-205ENST00000464539 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
TNRC6A-205ENST00000464539 MROH2AA6NES4 1674 aa15.36■□□□□ 0.05
TNRC6A-205ENST00000464539 RTN4Q9NQC3 1192 aaKnown RBP15.35■□□□□ 0.05
TNRC6A-205ENST00000464539 TROQ12816 1431 aaPredicted RBP15.35■□□□□ 0.05
TNRC6A-205ENST00000464539 HSPA1LP34931 641 aa15.34■□□□□ 0.05
TNRC6A-205ENST00000464539 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
TNRC6A-205ENST00000464539 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
TNRC6A-205ENST00000464539 GSE1Q14687 1217 aa15.33■□□□□ 0.05
TNRC6A-205ENST00000464539 ZNF142P52746 1687 aaPredicted RBP15.33■□□□□ 0.04
TNRC6A-205ENST00000464539 PDE4AP27815 886 aa15.33■□□□□ 0.04
TNRC6A-205ENST00000464539 BACH2Q9BYV9 841 aa15.33■□□□□ 0.04
TNRC6A-205ENST00000464539 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.04
TNRC6A-205ENST00000464539 ZMYM3Q14202 1370 aa15.32■□□□□ 0.04
TNRC6A-205ENST00000464539 ABCC1P33527 1531 aa15.32■□□□□ 0.04
TNRC6A-205ENST00000464539 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
TNRC6A-205ENST00000464539 TOM1O60784 492 aa15.31■□□□□ 0.04
TNRC6A-205ENST00000464539 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
TNRC6A-205ENST00000464539 POLR1AO95602 1720 aaPredicted RBP15.3■□□□□ 0.04
TNRC6A-205ENST00000464539 MYO3AQ8NEV4 1616 aa15.3■□□□□ 0.04
TNRC6A-205ENST00000464539 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
TNRC6A-205ENST00000464539 CEP170BQ9Y4F5 1589 aaPredicted RBP15.3■□□□□ 0.04
TNRC6A-205ENST00000464539 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
TNRC6A-205ENST00000464539 PIP4K2BP78356 416 aa15.29■□□□□ 0.04
TNRC6A-205ENST00000464539 ITSN2Q9NZM3 1697 aa15.29■□□□□ 0.04
TNRC6A-205ENST00000464539 CDC42BPBQ9Y5S2 1711 aa15.28■□□□□ 0.04
TNRC6A-205ENST00000464539 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
TNRC6A-205ENST00000464539 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
TNRC6A-205ENST00000464539 KIF7Q2M1P5 1343 aa15.28■□□□□ 0.04
TNRC6A-205ENST00000464539 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
TNRC6A-205ENST00000464539 CPS1P31327 1500 aa15.28■□□□□ 0.04
TNRC6A-205ENST00000464539 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
TNRC6A-205ENST00000464539 SUPT6HQ7KZ85 1726 aaKnown RBP15.27■□□□□ 0.03
TNRC6A-205ENST00000464539 MTUS2Q5JR59 1369 aa15.26■□□□□ 0.03
TNRC6A-205ENST00000464539 L3MBTL2Q969R5 705 aa15.26■□□□□ 0.03
TNRC6A-205ENST00000464539 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
TNRC6A-205ENST00000464539 MIA2Q96PC5 1412 aa15.24■□□□□ 0.03
TNRC6A-205ENST00000464539 RRP1P56182 461 aaKnown RBP15.24■□□□□ 0.03
TNRC6A-205ENST00000464539 FAM43AQ8N2R8 423 aa15.24■□□□□ 0.03
TNRC6A-205ENST00000464539 CLTCQ00610 1675 aaKnown RBP15.23■□□□□ 0.03
TNRC6A-205ENST00000464539 GCC2Q8IWJ2 1684 aa15.23■□□□□ 0.03
TNRC6A-205ENST00000464539 DHX29Q7Z478 1369 aaKnown RBP15.23■□□□□ 0.03
TNRC6A-205ENST00000464539 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
TNRC6A-205ENST00000464539 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
TNRC6A-205ENST00000464539 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
TNRC6A-205ENST00000464539 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.03
TNRC6A-205ENST00000464539 SHANK2Q9UPX8 1470 aa15.21■□□□□ 0.03
TNRC6A-205ENST00000464539 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms