RNA–Protein interactions for RNA: ENST00000464029.5

SYPL1-204, Transcript of synaptophysin like 1, humanhuman

TSL 2

Gene SYPL1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-204ENST00000464029 PROX2Q3B8N5 592 aa12.95□□□□□ -0.34
SYPL1-204ENST00000464029 DPYSL4O14531 572 aa12.91□□□□□ -0.34
SYPL1-204ENST00000464029 EPAS1Q99814 870 aa12.91□□□□□ -0.34
SYPL1-204ENST00000464029 C6orf132Q5T0Z8 1188 aa12.89□□□□□ -0.35
SYPL1-204ENST00000464029 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
SYPL1-204ENST00000464029 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
SYPL1-204ENST00000464029 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
SYPL1-204ENST00000464029 RGS20O76081 388 aa12.87□□□□□ -0.35
SYPL1-204ENST00000464029 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
SYPL1-204ENST00000464029 KIAA1468Q9P260 1216 aa12.86□□□□□ -0.35
SYPL1-204ENST00000464029 A0A0G2JS52 829 aa12.84□□□□□ -0.35
SYPL1-204ENST00000464029 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
SYPL1-204ENST00000464029 ZFRQ96KR1 1074 aaKnown RBP12.82□□□□□ -0.36
SYPL1-204ENST00000464029 BCAMP50895 628 aa12.81□□□□□ -0.36
SYPL1-204ENST00000464029 DDX12PQ92771 950 aa12.81□□□□□ -0.36
SYPL1-204ENST00000464029 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
SYPL1-204ENST00000464029 ITGBL1O95965 494 aaPredicted RBP12.79□□□□□ -0.36
SYPL1-204ENST00000464029 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
SYPL1-204ENST00000464029 PDIA6Q15084 440 aa12.78□□□□□ -0.36
SYPL1-204ENST00000464029 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
SYPL1-204ENST00000464029 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.37
SYPL1-204ENST00000464029 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
SYPL1-204ENST00000464029 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
SYPL1-204ENST00000464029 SPRYD3Q8NCJ5 442 aa12.75□□□□□ -0.37
SYPL1-204ENST00000464029 NBR1Q14596 966 aa12.74□□□□□ -0.37
SYPL1-204ENST00000464029 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
SYPL1-204ENST00000464029 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
SYPL1-204ENST00000464029 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
SYPL1-204ENST00000464029 MAP3K7O43318 606 aa12.7□□□□□ -0.38
SYPL1-204ENST00000464029 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
SYPL1-204ENST00000464029 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
SYPL1-204ENST00000464029 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
SYPL1-204ENST00000464029 E2F4Q16254 413 aa12.68□□□□□ -0.38
SYPL1-204ENST00000464029 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
SYPL1-204ENST00000464029 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
SYPL1-204ENST00000464029 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
SYPL1-204ENST00000464029 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
SYPL1-204ENST00000464029 TSR3Q9UJK0 312 aaKnown RBP12.67□□□□□ -0.38
SYPL1-204ENST00000464029 KCNC4Q03721 635 aa12.65□□□□□ -0.38
SYPL1-204ENST00000464029 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
SYPL1-204ENST00000464029 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
SYPL1-204ENST00000464029 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
SYPL1-204ENST00000464029 PRSS12P56730 875 aa12.62□□□□□ -0.39
SYPL1-204ENST00000464029 CERKQ8TCT0 537 aa12.62□□□□□ -0.39
SYPL1-204ENST00000464029 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
SYPL1-204ENST00000464029 FAM198AQ9UFP1 575 aa12.6□□□□□ -0.39
SYPL1-204ENST00000464029 GRXCR2A6NFK2 248 aa12.59□□□□□ -0.39
SYPL1-204ENST00000464029 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
SYPL1-204ENST00000464029 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
SYPL1-204ENST00000464029 SMAPO00193 183 aa12.57□□□□□ -0.4
SYPL1-204ENST00000464029 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
SYPL1-204ENST00000464029 OSBPP22059 807 aa12.56□□□□□ -0.4
SYPL1-204ENST00000464029 PPP4CP60510 307 aa12.56□□□□□ -0.4
SYPL1-204ENST00000464029 SAMD7Q7Z3H4 446 aa12.56□□□□□ -0.4
SYPL1-204ENST00000464029 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
SYPL1-204ENST00000464029 TATDN2Q93075 761 aa12.55□□□□□ -0.4
SYPL1-204ENST00000464029 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
SYPL1-204ENST00000464029 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
SYPL1-204ENST00000464029 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
SYPL1-204ENST00000464029 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
SYPL1-204ENST00000464029 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
SYPL1-204ENST00000464029 TJAP1Q5JTD0 557 aa12.5□□□□□ -0.41
SYPL1-204ENST00000464029 NUDT18Q6ZVK8 323 aa12.47□□□□□ -0.41
SYPL1-204ENST00000464029 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
SYPL1-204ENST00000464029 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
SYPL1-204ENST00000464029 MTRQ99707 1265 aa12.44□□□□□ -0.42
SYPL1-204ENST00000464029 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
SYPL1-204ENST00000464029 IL21Q9HBE4 155 aa12.42□□□□□ -0.42
SYPL1-204ENST00000464029 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
SYPL1-204ENST00000464029 Q6ZNB5 142 aa12.4□□□□□ -0.42
SYPL1-204ENST00000464029 APLP1P51693 650 aa12.39□□□□□ -0.43
SYPL1-204ENST00000464029 RNF40O75150 1001 aa12.38□□□□□ -0.43
SYPL1-204ENST00000464029 LAPTM4AQ15012 233 aa12.37□□□□□ -0.43
SYPL1-204ENST00000464029 PPP1R18Q6NYC8 613 aa12.37□□□□□ -0.43
SYPL1-204ENST00000464029 SWT1Q5T5J6 900 aaKnown RBP12.36□□□□□ -0.43
SYPL1-204ENST00000464029 ZNF516Q92618 1163 aa12.36□□□□□ -0.43
SYPL1-204ENST00000464029 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
SYPL1-204ENST00000464029 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
SYPL1-204ENST00000464029 EYA1Q99502 592 aa12.34□□□□□ -0.43
SYPL1-204ENST00000464029 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
SYPL1-204ENST00000464029 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.44
SYPL1-204ENST00000464029 MLLT3P42568 568 aaPredicted RBP12.31□□□□□ -0.44
SYPL1-204ENST00000464029 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
SYPL1-204ENST00000464029 V9GY48 417 aaPredicted RBP12.31□□□□□ -0.44
SYPL1-204ENST00000464029 GFRA3O60609 400 aa12.3□□□□□ -0.44
SYPL1-204ENST00000464029 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
SYPL1-204ENST00000464029 LCE2BO14633 110 aa12.28□□□□□ -0.44
SYPL1-204ENST00000464029 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
SYPL1-204ENST00000464029 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
SYPL1-204ENST00000464029 PTGDRQ13258 359 aa12.27□□□□□ -0.45
SYPL1-204ENST00000464029 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
SYPL1-204ENST00000464029 COPS2P61201 443 aa12.26□□□□□ -0.45
SYPL1-204ENST00000464029 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
SYPL1-204ENST00000464029 ZPR1O75312 459 aa12.23□□□□□ -0.45
SYPL1-204ENST00000464029 TRAF7Q6Q0C0 670 aa12.23□□□□□ -0.45
SYPL1-204ENST00000464029 PRR14Q9BWN1 585 aa12.23□□□□□ -0.45
SYPL1-204ENST00000464029 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
SYPL1-204ENST00000464029 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
SYPL1-204ENST00000464029 DNAJB2P25686 324 aa12.21□□□□□ -0.45
SYPL1-204ENST00000464029 GGCXP38435 758 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms