RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 IRX3P78415 501 aaPredicted RBP9.16□□□□□ -0.94
CDKL5-203ENST00000463994 RGS22Q8NE09 1264 aa9.16□□□□□ -0.94
CDKL5-203ENST00000463994 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
CDKL5-203ENST00000463994 GTPBP4Q9BZE4 634 aaKnown RBP9.16□□□□□ -0.94
CDKL5-203ENST00000463994 FAM13BQ9NYF5 915 aa9.16□□□□□ -0.94
CDKL5-203ENST00000463994 FSD2A1L4K1 749 aa9.15□□□□□ -0.94
CDKL5-203ENST00000463994 LETM1O95202 739 aaPredicted RBP9.15□□□□□ -0.94
CDKL5-203ENST00000463994 RIPK4P57078 832 aa9.15□□□□□ -0.94
CDKL5-203ENST00000463994 CNKSR2Q8WXI2 1034 aa9.15□□□□□ -0.94
CDKL5-203ENST00000463994 HSP90B1P14625 803 aaKnown RBP9.15□□□□□ -0.95
CDKL5-203ENST00000463994 ZSCAN20P17040 1043 aaPredicted RBP9.15□□□□□ -0.95
CDKL5-203ENST00000463994 PRDM10Q9NQV6 1147 aa9.15□□□□□ -0.95
CDKL5-203ENST00000463994 NUP160Q12769 1436 aa9.14□□□□□ -0.95
CDKL5-203ENST00000463994 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
CDKL5-203ENST00000463994 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
CDKL5-203ENST00000463994 DNTTIP2Q5QJE6 756 aaKnown RBP9.13□□□□□ -0.95
CDKL5-203ENST00000463994 MYH16Q9H6N6 1097 aa9.13□□□□□ -0.95
CDKL5-203ENST00000463994 GRIN2AQ12879 1464 aa9.13□□□□□ -0.95
CDKL5-203ENST00000463994 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
CDKL5-203ENST00000463994 MRE11P49959 708 aa9.12□□□□□ -0.95
CDKL5-203ENST00000463994 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
CDKL5-203ENST00000463994 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
CDKL5-203ENST00000463994 PANK2Q9BZ23 570 aa9.12□□□□□ -0.95
CDKL5-203ENST00000463994 ERBB4Q15303 1308 aa9.11□□□□□ -0.95
CDKL5-203ENST00000463994 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
CDKL5-203ENST00000463994 OFD1O75665 1012 aa9.11□□□□□ -0.95
CDKL5-203ENST00000463994 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
CDKL5-203ENST00000463994 CCNB3Q8WWL7 1395 aa9.11□□□□□ -0.95
CDKL5-203ENST00000463994 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDKL5-203ENST00000463994 CHMP7Q8WUX9 453 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-203ENST00000463994 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
CDKL5-203ENST00000463994 CCDC94Q9BW85 323 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-203ENST00000463994 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
CDKL5-203ENST00000463994 CUL7Q14999 1698 aa9.09□□□□□ -0.95
CDKL5-203ENST00000463994 CLGNO14967 610 aa9.09□□□□□ -0.95
CDKL5-203ENST00000463994 CNPY4Q8N129 248 aa9.09□□□□□ -0.95
CDKL5-203ENST00000463994 HIRIP3Q9BW71 556 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-203ENST00000463994 ISY1Q9ULR0 285 aaKnown RBP9.08□□□□□ -0.96
CDKL5-203ENST00000463994 MMP14P50281 582 aa9.08□□□□□ -0.96
CDKL5-203ENST00000463994 KANK4Q5T7N3 995 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-203ENST00000463994 DYNC1I1O14576 645 aa9.07□□□□□ -0.96
CDKL5-203ENST00000463994 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
CDKL5-203ENST00000463994 SLC20A2Q08357 652 aa9.07□□□□□ -0.96
CDKL5-203ENST00000463994 FAM9BQ8IZU0 186 aa9.07□□□□□ -0.96
CDKL5-203ENST00000463994 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
CDKL5-203ENST00000463994 MAPKBP1O60336 1514 aa9.06□□□□□ -0.96
CDKL5-203ENST00000463994 ZNF428Q96B54 188 aa9.06□□□□□ -0.96
CDKL5-203ENST00000463994 KIF27Q86VH2 1401 aa9.06□□□□□ -0.96
CDKL5-203ENST00000463994 KCNG1Q9UIX4 513 aa9.05□□□□□ -0.96
CDKL5-203ENST00000463994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDKL5-203ENST00000463994 WWC1Q8IX03 1113 aa9.04□□□□□ -0.96
CDKL5-203ENST00000463994 DNAJC2Q99543 621 aaKnown RBP9.04□□□□□ -0.96
CDKL5-203ENST00000463994 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
CDKL5-203ENST00000463994 GRPEL1Q9HAV7 217 aa9.04□□□□□ -0.96
CDKL5-203ENST00000463994 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
CDKL5-203ENST00000463994 HDAC5Q9UQL6 1122 aa9.04□□□□□ -0.96
CDKL5-203ENST00000463994 RAB3GAP2Q9H2M9 1393 aa9.03□□□□□ -0.96
CDKL5-203ENST00000463994 PTMSP20962 102 aa9.03□□□□□ -0.96
CDKL5-203ENST00000463994 SETD5Q9C0A6 1442 aa9.03□□□□□ -0.96
CDKL5-203ENST00000463994 UQCRHLA0A096LP55 91 aa9.02□□□□□ -0.96
CDKL5-203ENST00000463994 UQCRHP07919 91 aa9.02□□□□□ -0.96
CDKL5-203ENST00000463994 AXDND1Q5T1B0 1012 aaPredicted RBP9.02□□□□□ -0.96
CDKL5-203ENST00000463994 ZSCAN30Q86W11 494 aa9.02□□□□□ -0.96
CDKL5-203ENST00000463994 MRS2Q9HD23 443 aa9.02□□□□□ -0.96
CDKL5-203ENST00000463994 TIAM1Q13009 1591 aa9.02□□□□□ -0.96
CDKL5-203ENST00000463994 E9PSI1 815 aa9.02□□□□□ -0.97
CDKL5-203ENST00000463994 R3HCC1Q9Y3T6 440 aaKnown RBP9.02□□□□□ -0.97
CDKL5-203ENST00000463994 APPP05067 770 aa9.01□□□□□ -0.97
CDKL5-203ENST00000463994 C1orf115Q9H7X2 142 aa9.01□□□□□ -0.97
CDKL5-203ENST00000463994 CGNQ9P2M7 1197 aaKnown RBP9.01□□□□□ -0.97
CDKL5-203ENST00000463994 CCDC9Q9Y3X0 531 aaKnown RBP9.01□□□□□ -0.97
CDKL5-203ENST00000463994 MSNP26038 577 aaKnown RBP9.01□□□□□ -0.97
CDKL5-203ENST00000463994 CCDC184Q52MB2 194 aa9.01□□□□□ -0.97
CDKL5-203ENST00000463994 CYB5RLQ6IPT4 315 aa9.01□□□□□ -0.97
CDKL5-203ENST00000463994 ZNF622Q969S3 477 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDKL5-203ENST00000463994 PHLDB1Q86UU1 1377 aa9.01□□□□□ -0.97
CDKL5-203ENST00000463994 PTMAP06454 111 aaKnown RBP9.01□□□□□ -0.97
CDKL5-203ENST00000463994 EXOC6Q8TAG9 804 aa9.01□□□□□ -0.97
CDKL5-203ENST00000463994 FAM193AP78312 1265 aa9□□□□□ -0.97
CDKL5-203ENST00000463994 MAPK8IP2Q13387 824 aaPredicted RBP9□□□□□ -0.97
CDKL5-203ENST00000463994 FAM161AQ3B820 660 aa9□□□□□ -0.97
CDKL5-203ENST00000463994 IRX5P78411 483 aaPredicted RBP9□□□□□ -0.97
CDKL5-203ENST00000463994 PKD2Q13563 968 aa9□□□□□ -0.97
CDKL5-203ENST00000463994 BECN1Q14457 450 aa9□□□□□ -0.97
CDKL5-203ENST00000463994 PSEN1P49768 467 aa8.99□□□□□ -0.97
CDKL5-203ENST00000463994 GZF1Q9H116 711 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-203ENST00000463994 SENP3Q9H4L4 574 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-203ENST00000463994 RRP1P56182 461 aaKnown RBP8.99□□□□□ -0.97
CDKL5-203ENST00000463994 TMC1Q8TDI8 760 aa8.99□□□□□ -0.97
CDKL5-203ENST00000463994 KIAA0586Q9BVV6 1533 aa8.98□□□□□ -0.97
CDKL5-203ENST00000463994 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
CDKL5-203ENST00000463994 SLC52A1Q9NWF4 448 aa8.98□□□□□ -0.97
CDKL5-203ENST00000463994 YY1AP1Q9H869 796 aa8.98□□□□□ -0.97
CDKL5-203ENST00000463994 LRRC9Q6ZRR7 1453 aa8.97□□□□□ -0.97
CDKL5-203ENST00000463994 CCDC173Q0VFZ6 552 aa8.97□□□□□ -0.97
CDKL5-203ENST00000463994 PRKRIP1Q9H875 184 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-203ENST00000463994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDKL5-203ENST00000463994 MCM4P33991 863 aa8.97□□□□□ -0.97
CDKL5-203ENST00000463994 CFAP43Q8NDM7 1665 aa8.97□□□□□ -0.97
CDKL5-203ENST00000463994 CBX1P83916 185 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms