RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 DEKP35659 375 aaKnown RBP4.7□□□□□ -1.66
COL8A1-204ENST00000462604 RRP1P56182 461 aaKnown RBP4.7□□□□□ -1.66
COL8A1-204ENST00000462604 CNGB1Q14028 1251 aaPredicted RBP4.7□□□□□ -1.66
COL8A1-204ENST00000462604 PNISRQ8TF01 805 aaKnown RBP4.7□□□□□ -1.66
COL8A1-204ENST00000462604 IPO9Q96P70 1041 aaKnown RBP4.7□□□□□ -1.66
COL8A1-204ENST00000462604 LRPPRCP42704 1394 aaKnown RBP4.69□□□□□ -1.66
COL8A1-204ENST00000462604 KDM5DQ9BY66 1539 aa4.69□□□□□ -1.66
COL8A1-204ENST00000462604 ZNF608Q9ULD9 1512 aaPredicted RBP4.69□□□□□ -1.66
COL8A1-204ENST00000462604 TCERG1O14776 1098 aaKnown RBP4.69□□□□□ -1.66
COL8A1-204ENST00000462604 TSPY4P0CV99 314 aa4.69□□□□□ -1.66
COL8A1-204ENST00000462604 TSPY10P0CW01 314 aa4.69□□□□□ -1.66
COL8A1-204ENST00000462604 PDE3BQ13370 1112 aa4.69□□□□□ -1.66
COL8A1-204ENST00000462604 NLRP13Q86W25 1043 aa4.69□□□□□ -1.66
COL8A1-204ENST00000462604 ZBTB47Q9UFB7 747 aaPredicted RBP4.69□□□□□ -1.66
COL8A1-204ENST00000462604 ITSN2Q9NZM3 1697 aa4.69□□□□□ -1.66
COL8A1-204ENST00000462604 KDM5CP41229 1560 aa4.69□□□□□ -1.66
COL8A1-204ENST00000462604 MAGI1Q96QZ7 1491 aaPredicted RBP4.69□□□□□ -1.66
COL8A1-204ENST00000462604 INSRP06213 1382 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 PLEKHD1A6NEE1 506 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 MS4A1P11836 297 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 NBR1Q14596 966 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 CHMP7Q8WUX9 453 aaPredicted RBP4.68□□□□□ -1.66
COL8A1-204ENST00000462604 RCAN3Q9UKA8 241 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 SYNJ2O15056 1496 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 PLB1Q6P1J6 1458 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 ADCY10Q96PN6 1610 aa4.68□□□□□ -1.66
COL8A1-204ENST00000462604 ADGBQ8N7X0 1667 aa4.67□□□□□ -1.66
COL8A1-204ENST00000462604 PTPRGP23470 1445 aa4.67□□□□□ -1.66
COL8A1-204ENST00000462604 ST20-MTHFSA0A0A6YYL1 179 aa4.67□□□□□ -1.66
COL8A1-204ENST00000462604 PAK3O75914 559 aaPredicted RBP4.67□□□□□ -1.66
COL8A1-204ENST00000462604 TMEM132AQ24JP5 1023 aa4.67□□□□□ -1.66
COL8A1-204ENST00000462604 DCAF11Q8TEB1 546 aa4.67□□□□□ -1.66
COL8A1-204ENST00000462604 DNAJC5BQ9UF47 199 aa4.67□□□□□ -1.66
COL8A1-204ENST00000462604 PARD3Q8TEW0 1356 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 CCDC144AA2RUR9 1427 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 FBLN2P98095 1184 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 DDRGK1Q96HY6 314 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 ABCC10Q5T3U5 1492 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 CCDC141Q6ZP82 1450 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 PLEKHH2Q8IVE3 1493 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 CROCC2H7BZ55 1655 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 WASHC2CQ9Y4E1 1318 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 ZMYM4Q5VZL5 1548 aa4.66□□□□□ -1.66
COL8A1-204ENST00000462604 CEP170Q5SW79 1584 aa4.65□□□□□ -1.66
COL8A1-204ENST00000462604 NUP160Q12769 1436 aa4.65□□□□□ -1.66
COL8A1-204ENST00000462604 PRAG1Q86YV5 1406 aa4.65□□□□□ -1.66
COL8A1-204ENST00000462604 COL17A1Q9UMD9 1497 aaPredicted RBP4.65□□□□□ -1.66
COL8A1-204ENST00000462604 RSPH4AQ5TD94 716 aa4.65□□□□□ -1.67
COL8A1-204ENST00000462604 NPM2Q86SE8 214 aaKnown RBP4.65□□□□□ -1.67
COL8A1-204ENST00000462604 EXOC6Q8TAG9 804 aa4.65□□□□□ -1.67
COL8A1-204ENST00000462604 JPH4Q96JJ6 628 aa4.65□□□□□ -1.67
COL8A1-204ENST00000462604 EIF4G3O43432 1585 aaKnown RBP4.65□□□□□ -1.67
COL8A1-204ENST00000462604 ARHGEF5Q12774 1597 aa4.65□□□□□ -1.67
COL8A1-204ENST00000462604 GPRASP1Q5JY77 1395 aa4.65□□□□□ -1.67
COL8A1-204ENST00000462604 BLMP54132 1417 aaPredicted RBP4.64□□□□□ -1.67
COL8A1-204ENST00000462604 ATP10BO94823 1461 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 ERCC6Q03468 1493 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 POLR1AO95602 1720 aaPredicted RBP4.64□□□□□ -1.67
COL8A1-204ENST00000462604 BCORL1Q5H9F3 1711 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 FAM135AQ9P2D6 1515 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 PPM1GO15355 546 aaPredicted RBP4.64□□□□□ -1.67
COL8A1-204ENST00000462604 PDE4AP27815 886 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 TMF1P82094 1093 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 USP35Q9P2H5 1018 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 ABCA8O94911 1581 aa4.64□□□□□ -1.67
COL8A1-204ENST00000462604 ERBINQ96RT1 1412 aa4.63□□□□□ -1.67
COL8A1-204ENST00000462604 SENP3-EIF4A1A0A087X0R7 540 aa4.63□□□□□ -1.67
COL8A1-204ENST00000462604 HNRNPMP52272 730 aaKnown RBP eCLIP4.63□□□□□ -1.67
COL8A1-204ENST00000462604 EIF2AK4Q9P2K8 1649 aaKnown RBP4.62□□□□□ -1.67
COL8A1-204ENST00000462604 WDR43Q15061 677 aaKnown RBP eCLIP4.62□□□□□ -1.67
COL8A1-204ENST00000462604 CDCA8Q53HL2 280 aa4.62□□□□□ -1.67
COL8A1-204ENST00000462604 KLHL34Q8N239 644 aa4.62□□□□□ -1.67
COL8A1-204ENST00000462604 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.62□□□□□ -1.67
COL8A1-204ENST00000462604 CRBNQ96SW2 442 aa4.62□□□□□ -1.67
COL8A1-204ENST00000462604 BACH2Q9BYV9 841 aa4.62□□□□□ -1.67
COL8A1-204ENST00000462604 SALL2Q9Y467 1007 aaPredicted RBP4.62□□□□□ -1.67
COL8A1-204ENST00000462604 DISP3Q9P2K9 1392 aa4.62□□□□□ -1.67
COL8A1-204ENST00000462604 A2MP01023 1474 aa4.62□□□□□ -1.67
COL8A1-204ENST00000462604 NEFMP07197 916 aa4.61□□□□□ -1.67
COL8A1-204ENST00000462604 CC2D1BQ5T0F9 858 aaKnown RBP4.61□□□□□ -1.67
COL8A1-204ENST00000462604 CENPQQ7L2Z9 268 aaPredicted RBP4.61□□□□□ -1.67
COL8A1-204ENST00000462604 TESK2Q96S53 571 aa4.61□□□□□ -1.67
COL8A1-204ENST00000462604 LAS1LQ9Y4W2 734 aaKnown RBP4.61□□□□□ -1.67
COL8A1-204ENST00000462604 EIF3AQ14152 1382 aaKnown RBP4.61□□□□□ -1.67
COL8A1-204ENST00000462604 PRDM15P57071 1507 aaPredicted RBP4.61□□□□□ -1.67
COL8A1-204ENST00000462604 MAST1Q9Y2H9 1570 aa4.61□□□□□ -1.67
COL8A1-204ENST00000462604 LAMC1P11047 1609 aa4.61□□□□□ -1.67
COL8A1-204ENST00000462604 PER1O15534 1290 aaPredicted RBP4.6□□□□□ -1.67
COL8A1-204ENST00000462604 NBPF1Q3BBV0 1214 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 RGL3Q3MIN7 710 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 CDCA7LQ96GN5 454 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.6□□□□□ -1.67
COL8A1-204ENST00000462604 PANK3Q9H999 370 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 PODXL2Q9NZ53 605 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 KNSTRNQ9Y448 316 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 ATP10AO60312 1499 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 PLA2R1Q13018 1463 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 ARHGAP5Q13017 1502 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 UNC13BO14795 1591 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 E9PCH4 1651 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms