RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 POTEDQ86YR6 584 aa10.1□□□□□ -0.79
SREBF2-204ENST00000462539 SHROOM2Q13796 1616 aa10.1□□□□□ -0.79
SREBF2-204ENST00000462539 TTC37Q6PGP7 1564 aa10.09□□□□□ -0.79
SREBF2-204ENST00000462539 RNF123Q5XPI4 1314 aa10.08□□□□□ -0.8
SREBF2-204ENST00000462539 PRDM15P57071 1507 aaPredicted RBP10.08□□□□□ -0.8
SREBF2-204ENST00000462539 ZNF777Q9ULD5 760 aaPredicted RBP10.08□□□□□ -0.8
SREBF2-204ENST00000462539 KIF15Q9NS87 1388 aa10.08□□□□□ -0.8
SREBF2-204ENST00000462539 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
SREBF2-204ENST00000462539 NUP155O75694 1391 aa10.07□□□□□ -0.8
SREBF2-204ENST00000462539 LRPPRCP42704 1394 aaKnown RBP10.07□□□□□ -0.8
SREBF2-204ENST00000462539 PPP4R3CPQ6ZMV5 832 aa10.07□□□□□ -0.8
SREBF2-204ENST00000462539 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
SREBF2-204ENST00000462539 NUDCQ9Y266 331 aa10.07□□□□□ -0.8
SREBF2-204ENST00000462539 KTN1Q86UP2 1357 aaKnown RBP10.06□□□□□ -0.8
SREBF2-204ENST00000462539 MAGI2Q86UL8 1455 aa10.05□□□□□ -0.8
SREBF2-204ENST00000462539 COL17A1Q9UMD9 1497 aaPredicted RBP10.05□□□□□ -0.8
SREBF2-204ENST00000462539 BRD4O60885 1362 aaPredicted RBP10.05□□□□□ -0.8
SREBF2-204ENST00000462539 B4GALNT3Q6L9W6 998 aa10.05□□□□□ -0.8
SREBF2-204ENST00000462539 JPH4Q96JJ6 628 aa10.05□□□□□ -0.8
SREBF2-204ENST00000462539 PRAG1Q86YV5 1406 aa10.05□□□□□ -0.8
SREBF2-204ENST00000462539 IQGAP1P46940 1657 aa10.04□□□□□ -0.8
SREBF2-204ENST00000462539 ZNF326Q5BKZ1 582 aaKnown RBP10.04□□□□□ -0.8
SREBF2-204ENST00000462539 A2MP01023 1474 aa10.04□□□□□ -0.8
SREBF2-204ENST00000462539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.03□□□□□ -0.8
SREBF2-204ENST00000462539 PLEKHD1A6NEE1 506 aa10.03□□□□□ -0.8
SREBF2-204ENST00000462539 ARHGAP5Q13017 1502 aa10.02□□□□□ -0.8
SREBF2-204ENST00000462539 ZMYM4Q5VZL5 1548 aa10.02□□□□□ -0.8
SREBF2-204ENST00000462539 CEP152O94986 1710 aa10.02□□□□□ -0.8
SREBF2-204ENST00000462539 SPHKAPQ2M3C7 1700 aa10.02□□□□□ -0.8
SREBF2-204ENST00000462539 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
SREBF2-204ENST00000462539 GPRASP1Q5JY77 1395 aa10.01□□□□□ -0.81
SREBF2-204ENST00000462539 MADDQ8WXG6 1647 aa10.01□□□□□ -0.81
SREBF2-204ENST00000462539 PNISRQ8TF01 805 aaKnown RBP10.01□□□□□ -0.81
SREBF2-204ENST00000462539 POLR3GLQ9BT43 218 aa10.01□□□□□ -0.81
SREBF2-204ENST00000462539 ABCC2Q92887 1545 aa10.01□□□□□ -0.81
SREBF2-204ENST00000462539 DUOX2Q9NRD8 1548 aa10.01□□□□□ -0.81
SREBF2-204ENST00000462539 MYBBP1AQ9BQG0 1328 aaKnown RBP10.01□□□□□ -0.81
SREBF2-204ENST00000462539 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
SREBF2-204ENST00000462539 PLA2R1Q13018 1463 aa10□□□□□ -0.81
SREBF2-204ENST00000462539 PLEKHH2Q8IVE3 1493 aa10□□□□□ -0.81
SREBF2-204ENST00000462539 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
SREBF2-204ENST00000462539 ERICH6Q7L0X2 663 aa10□□□□□ -0.81
SREBF2-204ENST00000462539 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
SREBF2-204ENST00000462539 ABCC1P33527 1531 aa9.99□□□□□ -0.81
SREBF2-204ENST00000462539 TSPY4P0CV99 314 aa9.99□□□□□ -0.81
SREBF2-204ENST00000462539 TSPY10P0CW01 314 aa9.99□□□□□ -0.81
SREBF2-204ENST00000462539 RALBP1Q15311 655 aa9.99□□□□□ -0.81
SREBF2-204ENST00000462539 ZCCHC11Q5TAX3 1644 aaKnown RBP9.99□□□□□ -0.81
SREBF2-204ENST00000462539 BLMP54132 1417 aaPredicted RBP9.99□□□□□ -0.81
SREBF2-204ENST00000462539 ATP10AO60312 1499 aa9.98□□□□□ -0.81
SREBF2-204ENST00000462539 FBLN2P98095 1184 aa9.98□□□□□ -0.81
SREBF2-204ENST00000462539 MYOM1P52179 1685 aa9.98□□□□□ -0.81
SREBF2-204ENST00000462539 INSRP06213 1382 aa9.98□□□□□ -0.81
SREBF2-204ENST00000462539 DEPDC5O75140 1603 aa9.97□□□□□ -0.81
SREBF2-204ENST00000462539 ST20-MTHFSA0A0A6YYL1 179 aa9.97□□□□□ -0.81
SREBF2-204ENST00000462539 HNRNPMP52272 730 aaKnown RBP eCLIP9.97□□□□□ -0.81
SREBF2-204ENST00000462539 ERBINQ96RT1 1412 aa9.97□□□□□ -0.81
SREBF2-204ENST00000462539 TMC1Q8TDI8 760 aa9.96□□□□□ -0.82
SREBF2-204ENST00000462539 DCAF11Q8TEB1 546 aa9.96□□□□□ -0.82
SREBF2-204ENST00000462539 BCL11AQ9H165 835 aa9.96□□□□□ -0.82
SREBF2-204ENST00000462539 SYNMO15061 1565 aa9.96□□□□□ -0.82
SREBF2-204ENST00000462539 ERCC6L2Q5T890 1561 aa9.96□□□□□ -0.82
SREBF2-204ENST00000462539 CNGB1Q14028 1251 aaPredicted RBP9.95□□□□□ -0.82
SREBF2-204ENST00000462539 KIAA1210Q9ULL0 1709 aa9.95□□□□□ -0.82
SREBF2-204ENST00000462539 TET3O43151 1660 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 CLTCL1P53675 1640 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 TRPM2O94759 1503 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 CLASP1Q7Z460 1538 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 DISP3Q9P2K9 1392 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 RSPH4AQ5TD94 716 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 CCDC136Q96JN2 1154 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
SREBF2-204ENST00000462539 RRP1P56182 461 aaKnown RBP9.93□□□□□ -0.82
SREBF2-204ENST00000462539 NLRP13Q86W25 1043 aa9.93□□□□□ -0.82
SREBF2-204ENST00000462539 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
SREBF2-204ENST00000462539 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
SREBF2-204ENST00000462539 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
SREBF2-204ENST00000462539 NOP58Q9Y2X3 529 aaKnown RBP9.92□□□□□ -0.82
SREBF2-204ENST00000462539 KDM5AP29375 1690 aaKnown RBP9.92□□□□□ -0.82
SREBF2-204ENST00000462539 INO80Q9ULG1 1556 aaPredicted RBP9.92□□□□□ -0.82
SREBF2-204ENST00000462539 ARAP3Q8WWN8 1544 aa9.92□□□□□ -0.82
SREBF2-204ENST00000462539 PDE3BQ13370 1112 aa9.91□□□□□ -0.82
SREBF2-204ENST00000462539 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
SREBF2-204ENST00000462539 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.82
SREBF2-204ENST00000462539 TESK2Q96S53 571 aa9.9□□□□□ -0.82
SREBF2-204ENST00000462539 ABCA9Q8IUA7 1624 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 VWDEQ8N2E2 1590 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 WASHC2CQ9Y4E1 1318 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
SREBF2-204ENST00000462539 TRHP20396 242 aaPredicted RBP9.89□□□□□ -0.83
SREBF2-204ENST00000462539 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 WDR7Q9Y4E6 1490 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 PLCH2O75038 1416 aa9.89□□□□□ -0.83
SREBF2-204ENST00000462539 VIRMAQ69YN4 1812 aaKnown RBP9.89□□□□□ -0.83
SREBF2-204ENST00000462539 PIAS4Q8N2W9 510 aaPredicted RBP9.88□□□□□ -0.83
SREBF2-204ENST00000462539 RCAN3Q9UKA8 241 aa9.88□□□□□ -0.83
SREBF2-204ENST00000462539 ABCA6Q8N139 1617 aa9.88□□□□□ -0.83
SREBF2-204ENST00000462539 MYO3AQ8NEV4 1616 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms