RNA–Protein interactions for RNA: ENST00000462139.1

ZNF496-203, Transcript of zinc finger protein 496, humanhuman

TSL 1 (best)

Gene ZNF496, Length 9,243 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF496-203ENST00000462139 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
ZNF496-203ENST00000462139 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
ZNF496-203ENST00000462139 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
ZNF496-203ENST00000462139 PDS5BQ9NTI5 1447 aa12.87□□□□□ -0.35
ZNF496-203ENST00000462139 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
ZNF496-203ENST00000462139 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
ZNF496-203ENST00000462139 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
ZNF496-203ENST00000462139 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
ZNF496-203ENST00000462139 MTERF4Q7Z6M4 381 aaKnown RBP12.86□□□□□ -0.35
ZNF496-203ENST00000462139 GGT6Q6P531 493 aa12.85□□□□□ -0.35
ZNF496-203ENST00000462139 EFCAB2Q5VUJ9 269 aa12.85□□□□□ -0.35
ZNF496-203ENST00000462139 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
ZNF496-203ENST00000462139 NOL10Q9BSC4 688 aaKnown RBP12.85□□□□□ -0.35
ZNF496-203ENST00000462139 CCDC9Q9Y3X0 531 aaKnown RBP12.85□□□□□ -0.35
ZNF496-203ENST00000462139 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
ZNF496-203ENST00000462139 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
ZNF496-203ENST00000462139 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
ZNF496-203ENST00000462139 H3BQV1 296 aa12.84□□□□□ -0.35
ZNF496-203ENST00000462139 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
ZNF496-203ENST00000462139 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
ZNF496-203ENST00000462139 PKD2Q13563 968 aa12.84□□□□□ -0.35
ZNF496-203ENST00000462139 NUP155O75694 1391 aa12.84□□□□□ -0.35
ZNF496-203ENST00000462139 GOLGA6L19H0YKK7 550 aa12.83□□□□□ -0.35
ZNF496-203ENST00000462139 ANKRD20A12PQ8NF67 263 aa12.83□□□□□ -0.35
ZNF496-203ENST00000462139 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
ZNF496-203ENST00000462139 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
ZNF496-203ENST00000462139 AMPHP49418 695 aa12.83□□□□□ -0.36
ZNF496-203ENST00000462139 CPLX2Q6PUV4 134 aaKnown RBP12.83□□□□□ -0.36
ZNF496-203ENST00000462139 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
ZNF496-203ENST00000462139 NGDNQ8NEJ9 315 aaKnown RBP12.82□□□□□ -0.36
ZNF496-203ENST00000462139 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
ZNF496-203ENST00000462139 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
ZNF496-203ENST00000462139 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
ZNF496-203ENST00000462139 AAMPQ13685 434 aa12.81□□□□□ -0.36
ZNF496-203ENST00000462139 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
ZNF496-203ENST00000462139 PES1O00541 588 aaKnown RBP12.8□□□□□ -0.36
ZNF496-203ENST00000462139 TOMM22Q9NS69 142 aa12.8□□□□□ -0.36
ZNF496-203ENST00000462139 GZF1Q9H116 711 aaPredicted RBP12.8□□□□□ -0.36
ZNF496-203ENST00000462139 FAM184AQ8NB25 1140 aa12.79□□□□□ -0.36
ZNF496-203ENST00000462139 CALRP27797 417 aaKnown RBP12.79□□□□□ -0.36
ZNF496-203ENST00000462139 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
ZNF496-203ENST00000462139 CTDP1Q9Y5B0 961 aaPredicted RBP12.79□□□□□ -0.36
ZNF496-203ENST00000462139 KIF15Q9NS87 1388 aa12.79□□□□□ -0.36
ZNF496-203ENST00000462139 MFAP1P55081 439 aaKnown RBP12.79□□□□□ -0.36
ZNF496-203ENST00000462139 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
ZNF496-203ENST00000462139 SLKQ9H2G2 1235 aaPredicted RBP12.79□□□□□ -0.36
ZNF496-203ENST00000462139 NLRP13Q86W25 1043 aa12.79□□□□□ -0.36
ZNF496-203ENST00000462139 NEXNQ0ZGT2 675 aa12.79□□□□□ -0.36
ZNF496-203ENST00000462139 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
ZNF496-203ENST00000462139 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
ZNF496-203ENST00000462139 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
ZNF496-203ENST00000462139 SLC4A10Q6U841 1118 aa12.78□□□□□ -0.36
ZNF496-203ENST00000462139 HSPA5P11021 654 aaKnown RBP12.78□□□□□ -0.36
ZNF496-203ENST00000462139 TEX35Q5T0J7 233 aa12.77□□□□□ -0.36
ZNF496-203ENST00000462139 CUX1P39880 1505 aa12.77□□□□□ -0.36
ZNF496-203ENST00000462139 TRIM29Q14134 588 aa12.77□□□□□ -0.36
ZNF496-203ENST00000462139 BECN2A8MW95 431 aa12.76□□□□□ -0.37
ZNF496-203ENST00000462139 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
ZNF496-203ENST00000462139 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
ZNF496-203ENST00000462139 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
ZNF496-203ENST00000462139 NOM1Q5C9Z4 860 aaKnown RBP12.75□□□□□ -0.37
ZNF496-203ENST00000462139 REC8O95072 547 aa12.75□□□□□ -0.37
ZNF496-203ENST00000462139 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
ZNF496-203ENST00000462139 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
ZNF496-203ENST00000462139 MAP7D2Q96T17 732 aa12.75□□□□□ -0.37
ZNF496-203ENST00000462139 PDE4CQ08493 712 aa12.74□□□□□ -0.37
ZNF496-203ENST00000462139 RDXP35241 583 aaKnown RBP12.74□□□□□ -0.37
ZNF496-203ENST00000462139 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
ZNF496-203ENST00000462139 DHX8Q14562 1220 aaKnown RBP12.74□□□□□ -0.37
ZNF496-203ENST00000462139 CDR1P51861 262 aa12.74□□□□□ -0.37
ZNF496-203ENST00000462139 MPHOSPH9Q99550 1183 aa12.74□□□□□ -0.37
ZNF496-203ENST00000462139 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
ZNF496-203ENST00000462139 ZKSCAN1P17029 563 aaPredicted RBP12.73□□□□□ -0.37
ZNF496-203ENST00000462139 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
ZNF496-203ENST00000462139 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
ZNF496-203ENST00000462139 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
ZNF496-203ENST00000462139 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
ZNF496-203ENST00000462139 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
ZNF496-203ENST00000462139 EVA1CP58658 441 aa12.72□□□□□ -0.37
ZNF496-203ENST00000462139 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
ZNF496-203ENST00000462139 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
ZNF496-203ENST00000462139 RRP12Q5JTH9 1297 aaKnown RBP12.72□□□□□ -0.37
ZNF496-203ENST00000462139 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
ZNF496-203ENST00000462139 SOGA1O94964 1423 aa12.72□□□□□ -0.37
ZNF496-203ENST00000462139 TRDNQ13061 729 aa12.71□□□□□ -0.37
ZNF496-203ENST00000462139 EVC2Q86UK5 1308 aa12.71□□□□□ -0.37
ZNF496-203ENST00000462139 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
ZNF496-203ENST00000462139 ACBD3Q9H3P7 528 aa12.7□□□□□ -0.38
ZNF496-203ENST00000462139 COG3Q96JB2 828 aa12.7□□□□□ -0.38
ZNF496-203ENST00000462139 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
ZNF496-203ENST00000462139 ERICH2A1L162 156 aa12.69□□□□□ -0.38
ZNF496-203ENST00000462139 C9orf78Q9NZ63 289 aaPredicted RBP12.69□□□□□ -0.38
ZNF496-203ENST00000462139 TEFQ10587 303 aa12.69□□□□□ -0.38
ZNF496-203ENST00000462139 KIF3BO15066 747 aa12.69□□□□□ -0.38
ZNF496-203ENST00000462139 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.69□□□□□ -0.38
ZNF496-203ENST00000462139 CPLX1O14810 134 aa12.69□□□□□ -0.38
ZNF496-203ENST00000462139 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
ZNF496-203ENST00000462139 MYO6Q9UM54 1294 aa12.68□□□□□ -0.38
ZNF496-203ENST00000462139 CCAR2Q8N163 923 aaKnown RBP12.68□□□□□ -0.38
ZNF496-203ENST00000462139 AK7Q96M32 723 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms