RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 SETBP1Q9Y6X0 1596 aa10.74□□□□□ -0.69
NPHP1-209ENST00000461707 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
NPHP1-209ENST00000461707 PLCH2O75038 1416 aa10.73□□□□□ -0.69
NPHP1-209ENST00000461707 CARMIL2Q6F5E8 1435 aa10.72□□□□□ -0.69
NPHP1-209ENST00000461707 ADGRB3O60242 1522 aa10.72□□□□□ -0.69
NPHP1-209ENST00000461707 PLEKHH2Q8IVE3 1493 aa10.71□□□□□ -0.69
NPHP1-209ENST00000461707 CAMSAP1Q5T5Y3 1602 aa10.71□□□□□ -0.69
NPHP1-209ENST00000461707 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
NPHP1-209ENST00000461707 C9orf84Q5VXU9 1444 aa10.7□□□□□ -0.7
NPHP1-209ENST00000461707 HIRIP3Q9BW71 556 aaPredicted RBP10.7□□□□□ -0.7
NPHP1-209ENST00000461707 MTUS2Q5JR59 1369 aa10.69□□□□□ -0.7
NPHP1-209ENST00000461707 KIF1BO60333 1816 aa10.68□□□□□ -0.7
NPHP1-209ENST00000461707 KCNH8Q96L42 1107 aa10.68□□□□□ -0.7
NPHP1-209ENST00000461707 SHPRHQ149N8 1683 aa10.68□□□□□ -0.7
NPHP1-209ENST00000461707 ATP7AQ04656 1500 aa10.67□□□□□ -0.7
NPHP1-209ENST00000461707 ARHGEF28Q8N1W1 1705 aaKnown RBP10.67□□□□□ -0.7
NPHP1-209ENST00000461707 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
NPHP1-209ENST00000461707 DIP2CQ9Y2E4 1556 aa10.67□□□□□ -0.7
NPHP1-209ENST00000461707 MYOM2P54296 1465 aa10.67□□□□□ -0.7
NPHP1-209ENST00000461707 KNDC1Q76NI1 1749 aa10.66□□□□□ -0.7
NPHP1-209ENST00000461707 USP54Q70EL1 1684 aa10.65□□□□□ -0.7
NPHP1-209ENST00000461707 A2MP01023 1474 aa10.65□□□□□ -0.7
NPHP1-209ENST00000461707 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.7
NPHP1-209ENST00000461707 ADGRB1O14514 1584 aa10.65□□□□□ -0.71
NPHP1-209ENST00000461707 RIMS1Q86UR5 1692 aaKnown RBP10.64□□□□□ -0.71
NPHP1-209ENST00000461707 RIMBP3CA6NJZ7 1639 aa10.64□□□□□ -0.71
NPHP1-209ENST00000461707 RIMBP3BA6NNM3 1639 aa10.64□□□□□ -0.71
NPHP1-209ENST00000461707 RIMBP3Q9UFD9 1639 aa10.64□□□□□ -0.71
NPHP1-209ENST00000461707 DIP2BQ9P265 1576 aa10.64□□□□□ -0.71
NPHP1-209ENST00000461707 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
NPHP1-209ENST00000461707 INSRP06213 1382 aa10.63□□□□□ -0.71
NPHP1-209ENST00000461707 UGGT1Q9NYU2 1555 aa10.63□□□□□ -0.71
NPHP1-209ENST00000461707 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
NPHP1-209ENST00000461707 PREX1Q8TCU6 1659 aa10.62□□□□□ -0.71
NPHP1-209ENST00000461707 MLH3Q9UHC1 1453 aa10.62□□□□□ -0.71
NPHP1-209ENST00000461707 NRXN3Q9Y4C0 1643 aa10.62□□□□□ -0.71
NPHP1-209ENST00000461707 PRAG1Q86YV5 1406 aa10.61□□□□□ -0.71
NPHP1-209ENST00000461707 SCAPERQ9BY12 1400 aa10.61□□□□□ -0.71
NPHP1-209ENST00000461707 TMEM131LA2VDJ0 1609 aa10.61□□□□□ -0.71
NPHP1-209ENST00000461707 ABCC3O15438 1527 aa10.61□□□□□ -0.71
NPHP1-209ENST00000461707 RRP7BPQ9NSQ0 103 aa10.6□□□□□ -0.71
NPHP1-209ENST00000461707 FANCAO15360 1455 aa10.59□□□□□ -0.71
NPHP1-209ENST00000461707 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
NPHP1-209ENST00000461707 ANKRD50Q9ULJ7 1429 aa10.59□□□□□ -0.71
NPHP1-209ENST00000461707 COL17A1Q9UMD9 1497 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-209ENST00000461707 CNTLNQ9NXG0 1405 aa10.57□□□□□ -0.72
NPHP1-209ENST00000461707 ZNF644Q9H582 1327 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-209ENST00000461707 DDX10Q13206 875 aaKnown RBP10.56□□□□□ -0.72
NPHP1-209ENST00000461707 NEXMIFQ5QGS0 1516 aa10.56□□□□□ -0.72
NPHP1-209ENST00000461707 FOXD1Q16676 465 aa10.56□□□□□ -0.72
NPHP1-209ENST00000461707 ASXL1Q8IXJ9 1541 aa10.55□□□□□ -0.72
NPHP1-209ENST00000461707 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
NPHP1-209ENST00000461707 TOPAZ1Q8N9V7 1692 aa10.55□□□□□ -0.72
NPHP1-209ENST00000461707 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
NPHP1-209ENST00000461707 AGLP35573 1532 aa10.55□□□□□ -0.72
NPHP1-209ENST00000461707 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
NPHP1-209ENST00000461707 QRICH2Q9H0J4 1663 aa10.54□□□□□ -0.72
NPHP1-209ENST00000461707 ARHGAP5Q13017 1502 aa10.53□□□□□ -0.72
NPHP1-209ENST00000461707 FBLN2P98095 1184 aa10.53□□□□□ -0.72
NPHP1-209ENST00000461707 NRKQ7Z2Y5 1582 aa10.53□□□□□ -0.72
NPHP1-209ENST00000461707 NEO1Q92859 1461 aa10.53□□□□□ -0.72
NPHP1-209ENST00000461707 POGZQ7Z3K3 1410 aa10.52□□□□□ -0.73
NPHP1-209ENST00000461707 ARID4BQ4LE39 1312 aaPredicted RBP10.51□□□□□ -0.73
NPHP1-209ENST00000461707 ARHGAP31Q2M1Z3 1444 aa10.51□□□□□ -0.73
NPHP1-209ENST00000461707 LRPPRCP42704 1394 aaKnown RBP10.5□□□□□ -0.73
NPHP1-209ENST00000461707 WASHC2AQ641Q2 1341 aa10.5□□□□□ -0.73
NPHP1-209ENST00000461707 NOS1P29475 1434 aa10.49□□□□□ -0.73
NPHP1-209ENST00000461707 SPATA31D1Q6ZQQ2 1576 aa10.49□□□□□ -0.73
NPHP1-209ENST00000461707 NALCNQ8IZF0 1738 aa10.49□□□□□ -0.73
NPHP1-209ENST00000461707 MPHOSPH9Q99550 1183 aa10.49□□□□□ -0.73
NPHP1-209ENST00000461707 AKAP12Q02952 1782 aa10.49□□□□□ -0.73
NPHP1-209ENST00000461707 ANKRD30AQ9BXX3 1397 aa10.49□□□□□ -0.73
NPHP1-209ENST00000461707 CCER2I3L3R5 266 aa10.49□□□□□ -0.73
NPHP1-209ENST00000461707 NBPF8Q3BBV2 869 aa10.48□□□□□ -0.73
NPHP1-209ENST00000461707 CCDC7Q96M83 1385 aa10.47□□□□□ -0.73
NPHP1-209ENST00000461707 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
NPHP1-209ENST00000461707 ADGRB2O60241 1585 aa10.46□□□□□ -0.73
NPHP1-209ENST00000461707 CDC42BPGQ6DT37 1551 aa10.46□□□□□ -0.73
NPHP1-209ENST00000461707 CHMP7Q8WUX9 453 aaPredicted RBP10.46□□□□□ -0.73
NPHP1-209ENST00000461707 RNF123Q5XPI4 1314 aa10.46□□□□□ -0.74
NPHP1-209ENST00000461707 KIF15Q9NS87 1388 aa10.45□□□□□ -0.74
NPHP1-209ENST00000461707 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
NPHP1-209ENST00000461707 MON2Q7Z3U7 1717 aa10.45□□□□□ -0.74
NPHP1-209ENST00000461707 ARHGEF40Q8TER5 1519 aa10.45□□□□□ -0.74
NPHP1-209ENST00000461707 TONSLQ96HA7 1378 aa10.45□□□□□ -0.74
NPHP1-209ENST00000461707 RSPH4AQ5TD94 716 aa10.44□□□□□ -0.74
NPHP1-209ENST00000461707 N4BP2Q86UW6 1770 aaPredicted RBP10.44□□□□□ -0.74
NPHP1-209ENST00000461707 ASXL2Q76L83 1435 aa10.44□□□□□ -0.74
NPHP1-209ENST00000461707 KIF20BQ96Q89 1820 aa10.44□□□□□ -0.74
NPHP1-209ENST00000461707 ZFYVE9O95405 1425 aa10.43□□□□□ -0.74
NPHP1-209ENST00000461707 BLMP54132 1417 aaPredicted RBP10.43□□□□□ -0.74
NPHP1-209ENST00000461707 PIK3C2GO75747 1445 aa10.42□□□□□ -0.74
NPHP1-209ENST00000461707 UBR1Q8IWV7 1749 aa10.42□□□□□ -0.74
NPHP1-209ENST00000461707 ZNF777Q9ULD5 760 aaPredicted RBP10.42□□□□□ -0.74
NPHP1-209ENST00000461707 SBNO2Q9Y2G9 1366 aa10.41□□□□□ -0.74
NPHP1-209ENST00000461707 RGPD1P0DJD0 1748 aa10.41□□□□□ -0.74
NPHP1-209ENST00000461707 PARD3Q8TEW0 1356 aa10.4□□□□□ -0.74
NPHP1-209ENST00000461707 L3MBTL2Q969R5 705 aa10.4□□□□□ -0.75
NPHP1-209ENST00000461707 ERVK-7P63135 1459 aa10.4□□□□□ -0.75
NPHP1-209ENST00000461707 ZNF142P52746 1687 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms