RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 ANP32CO43423 234 aa5.73□□□□□ -1.49
ATP13A3-206ENST00000461660 NEO1Q92859 1461 aa5.73□□□□□ -1.49
ATP13A3-206ENST00000461660 RIMBP3CA6NJZ7 1639 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 RIMBP3BA6NNM3 1639 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 RIMBP3Q9UFD9 1639 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 PZPP20742 1482 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 ARHGEF12Q9NZN5 1544 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 MSH5O43196 834 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 ATP7AQ04656 1500 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 POGZQ7Z3K3 1410 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 ABCA9Q8IUA7 1624 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 CDC42BPBQ9Y5S2 1711 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 CFAP74Q9C0B2 1584 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 A2MP01023 1474 aa5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 RPRD2Q5VT52 1461 aaKnown RBP5.72□□□□□ -1.49
ATP13A3-206ENST00000461660 HSPA5P11021 654 aaKnown RBP5.71□□□□□ -1.49
ATP13A3-206ENST00000461660 KDM6BO15054 1643 aa5.71□□□□□ -1.49
ATP13A3-206ENST00000461660 FAM135AQ9P2D6 1515 aa5.71□□□□□ -1.5
ATP13A3-206ENST00000461660 CNGB1Q14028 1251 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 PLPPR3Q6T4P5 718 aa5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 PIAS4Q8N2W9 510 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 MAST1Q9Y2H9 1570 aa5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 ROCK2O75116 1388 aaKnown RBP5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 MIER1Q8N108 512 aa5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 BCANQ96GW7 911 aa5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 CROCC2H7BZ55 1655 aa5.7□□□□□ -1.5
ATP13A3-206ENST00000461660 PLXNC1O60486 1568 aa5.69□□□□□ -1.5
ATP13A3-206ENST00000461660 ZFYVE16Q7Z3T8 1539 aa5.69□□□□□ -1.5
ATP13A3-206ENST00000461660 STAC3Q96MF2 364 aa5.68□□□□□ -1.5
ATP13A3-206ENST00000461660 NBPF8Q3BBV2 869 aa5.68□□□□□ -1.5
ATP13A3-206ENST00000461660 MLH3Q9UHC1 1453 aa5.68□□□□□ -1.5
ATP13A3-206ENST00000461660 USP47Q96K76 1375 aa5.67□□□□□ -1.5
ATP13A3-206ENST00000461660 KDM5DQ9BY66 1539 aa5.66□□□□□ -1.5
ATP13A3-206ENST00000461660 CDCA8Q53HL2 280 aa5.66□□□□□ -1.5
ATP13A3-206ENST00000461660 HECW2Q9P2P5 1572 aa5.65□□□□□ -1.5
ATP13A3-206ENST00000461660 SLC52A1Q9NWF4 448 aa5.65□□□□□ -1.5
ATP13A3-206ENST00000461660 SLC24A1O60721 1099 aa5.65□□□□□ -1.5
ATP13A3-206ENST00000461660 TMF1P82094 1093 aa5.65□□□□□ -1.5
ATP13A3-206ENST00000461660 PPP6R1Q9UPN7 881 aa5.65□□□□□ -1.5
ATP13A3-206ENST00000461660 YEATS2Q9ULM3 1422 aa5.65□□□□□ -1.51
ATP13A3-206ENST00000461660 ATP10AO60312 1499 aa5.65□□□□□ -1.51
ATP13A3-206ENST00000461660 ST20-MTHFSA0A0A6YYL1 179 aa5.65□□□□□ -1.51
ATP13A3-206ENST00000461660 VGFO15240 615 aaPredicted RBP5.65□□□□□ -1.51
ATP13A3-206ENST00000461660 HDGFP51858 240 aaKnown RBP5.65□□□□□ -1.51
ATP13A3-206ENST00000461660 GLI2P10070 1586 aa5.65□□□□□ -1.51
ATP13A3-206ENST00000461660 EIF3AQ14152 1382 aaKnown RBP5.64□□□□□ -1.51
ATP13A3-206ENST00000461660 MAGI2Q86UL8 1455 aa5.64□□□□□ -1.51
ATP13A3-206ENST00000461660 INO80Q9ULG1 1556 aaPredicted RBP5.64□□□□□ -1.51
ATP13A3-206ENST00000461660 UNC13BO14795 1591 aa5.64□□□□□ -1.51
ATP13A3-206ENST00000461660 DIP2BQ9P265 1576 aa5.63□□□□□ -1.51
ATP13A3-206ENST00000461660 NUTM2DQ5VT03 806 aaPredicted RBP5.63□□□□□ -1.51
ATP13A3-206ENST00000461660 TSPOAP1O95153 1857 aa5.63□□□□□ -1.51
ATP13A3-206ENST00000461660 IQGAP3Q86VI3 1631 aa5.62□□□□□ -1.51
ATP13A3-206ENST00000461660 CCDC7Q96M83 1385 aa5.62□□□□□ -1.51
ATP13A3-206ENST00000461660 RPGRIP1LQ68CZ1 1315 aa5.62□□□□□ -1.51
ATP13A3-206ENST00000461660 NBPF1Q3BBV0 1214 aa5.62□□□□□ -1.51
ATP13A3-206ENST00000461660 POGKQ9P215 609 aa5.62□□□□□ -1.51
ATP13A3-206ENST00000461660 KDM5CP41229 1560 aa5.62□□□□□ -1.51
ATP13A3-206ENST00000461660 CNTLNQ9NXG0 1405 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 KIF7Q2M1P5 1343 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 WASHC2AQ641Q2 1341 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 CFAP70Q5T0N1 1121 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 DNAJC5Q9H3Z4 198 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 RALGAPBQ86X10 1494 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 IDI1Q13907 227 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 MRS2Q9HD23 443 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 STK26Q9P289 416 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 FBXO31Q5XUX0 539 aaPredicted RBP5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 TRAK1Q9UPV9 953 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 PLA2R1Q13018 1463 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 NPATQ14207 1427 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 UHRF1BP1Q6BDS2 1440 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 PRAG1Q86YV5 1406 aa5.61□□□□□ -1.51
ATP13A3-206ENST00000461660 EIF2AK4Q9P2K8 1649 aaKnown RBP5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 TMC1Q8TDI8 760 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 MAP3K4Q9Y6R4 1608 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 CCER2I3L3R5 266 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 EID1Q9Y6B2 187 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 KIDINS220Q9ULH0 1771 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 PRDM15P57071 1507 aaPredicted RBP5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 TET3O43151 1660 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 PTPRTO14522 1441 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 KNSTRNQ9Y448 316 aa5.6□□□□□ -1.51
ATP13A3-206ENST00000461660 TRPM2O94759 1503 aa5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 DIP2CQ9Y2E4 1556 aa5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 EFCAB6Q5THR3 1501 aa5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 ADGRF5Q8IZF2 1346 aa5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 NOS1P29475 1434 aa5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 ABCC3O15438 1527 aa5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 ADRA2BP18089 450 aa5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 SAFB2Q14151 953 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATP13A3-206ENST00000461660 CENPJQ9HC77 1338 aaPredicted RBP5.59□□□□□ -1.52
ATP13A3-206ENST00000461660 NEFLP07196 543 aa5.58□□□□□ -1.52
ATP13A3-206ENST00000461660 ABCA6Q8N139 1617 aa5.58□□□□□ -1.52
ATP13A3-206ENST00000461660 FAM9BQ8IZU0 186 aa5.58□□□□□ -1.52
ATP13A3-206ENST00000461660 SPATA31E1Q6ZUB1 1445 aa5.58□□□□□ -1.52
ATP13A3-206ENST00000461660 TMEM132EQ6IEE7 984 aa5.58□□□□□ -1.52
ATP13A3-206ENST00000461660 TNRQ92752 1358 aa5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 SRPK2P78362 688 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms