RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
ECHDC1-212ENST00000461239 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
ECHDC1-212ENST00000461239 SOGA1O94964 1423 aa13.77□□□□□ -0.21
ECHDC1-212ENST00000461239 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
ECHDC1-212ENST00000461239 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
ECHDC1-212ENST00000461239 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
ECHDC1-212ENST00000461239 GPR37O15354 613 aa13.75□□□□□ -0.21
ECHDC1-212ENST00000461239 AK7Q96M32 723 aa13.75□□□□□ -0.21
ECHDC1-212ENST00000461239 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
ECHDC1-212ENST00000461239 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-212ENST00000461239 MAP3K9P80192 1104 aa13.73□□□□□ -0.21
ECHDC1-212ENST00000461239 OXER1Q8TDS5 423 aa13.73□□□□□ -0.21
ECHDC1-212ENST00000461239 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.21
ECHDC1-212ENST00000461239 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
ECHDC1-212ENST00000461239 SEC24BO95487 1268 aa13.72□□□□□ -0.21
ECHDC1-212ENST00000461239 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
ECHDC1-212ENST00000461239 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
ECHDC1-212ENST00000461239 GRXCR2A6NFK2 248 aa13.69□□□□□ -0.22
ECHDC1-212ENST00000461239 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-212ENST00000461239 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-212ENST00000461239 SLC39A7Q92504 469 aa13.68□□□□□ -0.22
ECHDC1-212ENST00000461239 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
ECHDC1-212ENST00000461239 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
ECHDC1-212ENST00000461239 PTGER2P43116 358 aa13.67□□□□□ -0.22
ECHDC1-212ENST00000461239 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
ECHDC1-212ENST00000461239 OSBPP22059 807 aa13.66□□□□□ -0.22
ECHDC1-212ENST00000461239 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
ECHDC1-212ENST00000461239 TRIM66O15016 1216 aa13.64□□□□□ -0.23
ECHDC1-212ENST00000461239 C7P10643 843 aa13.64□□□□□ -0.23
ECHDC1-212ENST00000461239 GPBP1L1Q9HC44 474 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-212ENST00000461239 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
ECHDC1-212ENST00000461239 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
ECHDC1-212ENST00000461239 PDE4DQ08499 809 aa13.6□□□□□ -0.23
ECHDC1-212ENST00000461239 MAMSTRQ6ZN01 415 aa13.6□□□□□ -0.23
ECHDC1-212ENST00000461239 DDX12PQ92771 950 aa13.6□□□□□ -0.23
ECHDC1-212ENST00000461239 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
ECHDC1-212ENST00000461239 TBC1D12O60347 775 aa13.59□□□□□ -0.23
ECHDC1-212ENST00000461239 EVI5O60447 810 aa13.59□□□□□ -0.23
ECHDC1-212ENST00000461239 PTCD2Q8WV60 388 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-212ENST00000461239 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-212ENST00000461239 KDM4CQ9H3R0 1056 aa13.58□□□□□ -0.24
ECHDC1-212ENST00000461239 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
ECHDC1-212ENST00000461239 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
ECHDC1-212ENST00000461239 MAP2K5Q13163 448 aa13.56□□□□□ -0.24
ECHDC1-212ENST00000461239 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
ECHDC1-212ENST00000461239 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-212ENST00000461239 GNPATO15228 680 aa13.54□□□□□ -0.24
ECHDC1-212ENST00000461239 SLC34A2O95436 690 aa13.54□□□□□ -0.24
ECHDC1-212ENST00000461239 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
ECHDC1-212ENST00000461239 HIC1Q14526 733 aa13.53□□□□□ -0.24
ECHDC1-212ENST00000461239 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
ECHDC1-212ENST00000461239 C14orf37Q86TY3 774 aa13.52□□□□□ -0.25
ECHDC1-212ENST00000461239 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
ECHDC1-212ENST00000461239 MAGI1Q96QZ7 1491 aaPredicted RBP13.52□□□□□ -0.25
ECHDC1-212ENST00000461239 IRF6O14896 467 aa13.51□□□□□ -0.25
ECHDC1-212ENST00000461239 FCHSD2O94868 740 aa13.51□□□□□ -0.25
ECHDC1-212ENST00000461239 FECHP22830 423 aa13.51□□□□□ -0.25
ECHDC1-212ENST00000461239 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
ECHDC1-212ENST00000461239 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
ECHDC1-212ENST00000461239 IGF1RP08069 1367 aa13.49□□□□□ -0.25
ECHDC1-212ENST00000461239 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
ECHDC1-212ENST00000461239 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 CHD1O14646 1710 aa13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 PTGDRQ13258 359 aa13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 CDAN1Q8IWY9 1227 aa13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
ECHDC1-212ENST00000461239 AMHR2Q16671 573 aa13.47□□□□□ -0.25
ECHDC1-212ENST00000461239 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
ECHDC1-212ENST00000461239 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.25
ECHDC1-212ENST00000461239 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
ECHDC1-212ENST00000461239 PHF14O94880 888 aa13.42□□□□□ -0.26
ECHDC1-212ENST00000461239 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
ECHDC1-212ENST00000461239 PARP9Q8IXQ6 854 aa13.42□□□□□ -0.26
ECHDC1-212ENST00000461239 FAM117AQ9C073 453 aa13.42□□□□□ -0.26
ECHDC1-212ENST00000461239 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
ECHDC1-212ENST00000461239 CDHR5Q9HBB8 845 aa13.41□□□□□ -0.26
ECHDC1-212ENST00000461239 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-212ENST00000461239 EPAS1Q99814 870 aa13.4□□□□□ -0.26
ECHDC1-212ENST00000461239 NPDC1Q9NQX5 325 aaPredicted RBP13.4□□□□□ -0.26
ECHDC1-212ENST00000461239 PCDHGA4Q9Y5G9 962 aa13.4□□□□□ -0.26
ECHDC1-212ENST00000461239 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
ECHDC1-212ENST00000461239 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
ECHDC1-212ENST00000461239 PCDHGA10Q9Y5H3 936 aa13.38□□□□□ -0.27
ECHDC1-212ENST00000461239 NUP160Q12769 1436 aa13.38□□□□□ -0.27
ECHDC1-212ENST00000461239 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
ECHDC1-212ENST00000461239 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
ECHDC1-212ENST00000461239 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
ECHDC1-212ENST00000461239 CUL7Q14999 1698 aa13.34□□□□□ -0.27
ECHDC1-212ENST00000461239 MAP3K7O43318 606 aa13.34□□□□□ -0.27
ECHDC1-212ENST00000461239 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
ECHDC1-212ENST00000461239 DDRGK1Q96HY6 314 aa13.34□□□□□ -0.27
ECHDC1-212ENST00000461239 TSR1Q2NL82 804 aaKnown RBP13.32□□□□□ -0.28
ECHDC1-212ENST00000461239 TYW1BQ6NUM6 668 aa13.32□□□□□ -0.28
ECHDC1-212ENST00000461239 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
ECHDC1-212ENST00000461239 PRXQ9BXM0 1461 aa13.31□□□□□ -0.28
ECHDC1-212ENST00000461239 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
ECHDC1-212ENST00000461239 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms