RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 EPAS1Q99814 870 aa10.13□□□□□ -0.79
CCDC58-202ENST00000460810 ONECUT3O60422 494 aaPredicted RBP10.12□□□□□ -0.79
CCDC58-202ENST00000460810 COL9A1P20849 921 aa10.12□□□□□ -0.79
CCDC58-202ENST00000460810 LAPTM4BQ86VI4 370 aa10.11□□□□□ -0.79
CCDC58-202ENST00000460810 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
CCDC58-202ENST00000460810 PROX2Q3B8N5 592 aa10.1□□□□□ -0.79
CCDC58-202ENST00000460810 DPYSL4O14531 572 aa10.09□□□□□ -0.79
CCDC58-202ENST00000460810 ANKK1Q8NFD2 765 aa10.09□□□□□ -0.79
CCDC58-202ENST00000460810 C6orf132Q5T0Z8 1188 aa10.08□□□□□ -0.8
CCDC58-202ENST00000460810 KIAA1468Q9P260 1216 aa10.06□□□□□ -0.8
CCDC58-202ENST00000460810 A0A0G2JS52 829 aa10.05□□□□□ -0.8
CCDC58-202ENST00000460810 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
CCDC58-202ENST00000460810 NYAP1Q6ZVC0 841 aa10.04□□□□□ -0.8
CCDC58-202ENST00000460810 ZFRQ96KR1 1074 aaKnown RBP10.03□□□□□ -0.8
CCDC58-202ENST00000460810 TRIM6-TRIM34B2RNG4 842 aa10.02□□□□□ -0.81
CCDC58-202ENST00000460810 ITGBL1O95965 494 aaPredicted RBP10.01□□□□□ -0.81
CCDC58-202ENST00000460810 BCAMP50895 628 aa10□□□□□ -0.81
CCDC58-202ENST00000460810 DDX12PQ92771 950 aa10□□□□□ -0.81
CCDC58-202ENST00000460810 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
CCDC58-202ENST00000460810 PDIA6Q15084 440 aa9.99□□□□□ -0.81
CCDC58-202ENST00000460810 FAM98CQ17RN3 349 aaKnown RBP9.99□□□□□ -0.81
CCDC58-202ENST00000460810 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
CCDC58-202ENST00000460810 RBM33Q96EV2 1170 aaKnown RBP9.99□□□□□ -0.81
CCDC58-202ENST00000460810 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
CCDC58-202ENST00000460810 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
CCDC58-202ENST00000460810 SEPT9Q9UHD8 586 aaPredicted RBP9.97□□□□□ -0.81
CCDC58-202ENST00000460810 NBR1Q14596 966 aa9.96□□□□□ -0.82
CCDC58-202ENST00000460810 PACS2Q86VP3 889 aa9.95□□□□□ -0.82
CCDC58-202ENST00000460810 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
CCDC58-202ENST00000460810 MAP3K7O43318 606 aa9.94□□□□□ -0.82
CCDC58-202ENST00000460810 IRX2Q9BZI1 471 aaPredicted RBP9.94□□□□□ -0.82
CCDC58-202ENST00000460810 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
CCDC58-202ENST00000460810 TSR3Q9UJK0 312 aaKnown RBP9.94□□□□□ -0.82
CCDC58-202ENST00000460810 ARIH1Q9Y4X5 557 aaPredicted RBP9.94□□□□□ -0.82
CCDC58-202ENST00000460810 E2F4Q16254 413 aa9.93□□□□□ -0.82
CCDC58-202ENST00000460810 KCNC4Q03721 635 aa9.92□□□□□ -0.82
CCDC58-202ENST00000460810 TSR1Q2NL82 804 aaKnown RBP9.92□□□□□ -0.82
CCDC58-202ENST00000460810 CERKQ8TCT0 537 aa9.92□□□□□ -0.82
CCDC58-202ENST00000460810 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
CCDC58-202ENST00000460810 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
CCDC58-202ENST00000460810 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
CCDC58-202ENST00000460810 WDR70Q9NW82 654 aa9.89□□□□□ -0.83
CCDC58-202ENST00000460810 HPS5Q9UPZ3 1129 aa9.89□□□□□ -0.83
CCDC58-202ENST00000460810 PRSS12P56730 875 aa9.88□□□□□ -0.83
CCDC58-202ENST00000460810 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
CCDC58-202ENST00000460810 PPP4CP60510 307 aa9.85□□□□□ -0.83
CCDC58-202ENST00000460810 GRXCR2A6NFK2 248 aa9.84□□□□□ -0.83
CCDC58-202ENST00000460810 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
CCDC58-202ENST00000460810 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
CCDC58-202ENST00000460810 CFAP44Q96MT7 982 aa9.83□□□□□ -0.84
CCDC58-202ENST00000460810 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
CCDC58-202ENST00000460810 TATDN2Q93075 761 aa9.82□□□□□ -0.84
CCDC58-202ENST00000460810 RTN4Q9NQC3 1192 aaKnown RBP9.82□□□□□ -0.84
CCDC58-202ENST00000460810 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
CCDC58-202ENST00000460810 FAM198AQ9UFP1 575 aa9.82□□□□□ -0.84
CCDC58-202ENST00000460810 OSBPP22059 807 aa9.81□□□□□ -0.84
CCDC58-202ENST00000460810 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
CCDC58-202ENST00000460810 SMAPO00193 183 aa9.8□□□□□ -0.84
CCDC58-202ENST00000460810 PNMA3Q9UL41 463 aa9.8□□□□□ -0.84
CCDC58-202ENST00000460810 HDGFP51858 240 aaKnown RBP9.78□□□□□ -0.84
CCDC58-202ENST00000460810 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
CCDC58-202ENST00000460810 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
CCDC58-202ENST00000460810 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
CCDC58-202ENST00000460810 NUDT18Q6ZVK8 323 aa9.75□□□□□ -0.85
CCDC58-202ENST00000460810 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
CCDC58-202ENST00000460810 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
CCDC58-202ENST00000460810 IL21Q9HBE4 155 aa9.74□□□□□ -0.85
CCDC58-202ENST00000460810 LAPTM4AQ15012 233 aa9.73□□□□□ -0.85
CCDC58-202ENST00000460810 MTRQ99707 1265 aa9.72□□□□□ -0.85
CCDC58-202ENST00000460810 NPDC1Q9NQX5 325 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-202ENST00000460810 Q6ZNB5 142 aa9.71□□□□□ -0.86
CCDC58-202ENST00000460810 PADI6Q6TGC4 694 aa9.69□□□□□ -0.86
CCDC58-202ENST00000460810 APLP1P51693 650 aa9.68□□□□□ -0.86
CCDC58-202ENST00000460810 SLF2Q8IX21 1173 aa9.68□□□□□ -0.86
CCDC58-202ENST00000460810 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
CCDC58-202ENST00000460810 RNF40O75150 1001 aa9.67□□□□□ -0.86
CCDC58-202ENST00000460810 PPP1R18Q6NYC8 613 aa9.67□□□□□ -0.86
CCDC58-202ENST00000460810 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
CCDC58-202ENST00000460810 SWT1Q5T5J6 900 aaKnown RBP9.66□□□□□ -0.86
CCDC58-202ENST00000460810 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
CCDC58-202ENST00000460810 ZNF516Q92618 1163 aa9.65□□□□□ -0.86
CCDC58-202ENST00000460810 EYA1Q99502 592 aa9.65□□□□□ -0.86
CCDC58-202ENST00000460810 PRKD2Q9BZL6 878 aa9.65□□□□□ -0.86
CCDC58-202ENST00000460810 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
CCDC58-202ENST00000460810 GFRA3O60609 400 aa9.64□□□□□ -0.87
CCDC58-202ENST00000460810 PRR14Q9BWN1 585 aa9.63□□□□□ -0.87
CCDC58-202ENST00000460810 GGCXP38435 758 aa9.61□□□□□ -0.87
CCDC58-202ENST00000460810 MLLT3P42568 568 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-202ENST00000460810 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
CCDC58-202ENST00000460810 NRG2O14511 850 aaPredicted RBP9.59□□□□□ -0.87
CCDC58-202ENST00000460810 PTGDRQ13258 359 aa9.59□□□□□ -0.87
CCDC58-202ENST00000460810 TRAF7Q6Q0C0 670 aa9.59□□□□□ -0.87
CCDC58-202ENST00000460810 COPS2P61201 443 aa9.58□□□□□ -0.88
CCDC58-202ENST00000460810 NKX2-3Q8TAU0 364 aa9.58□□□□□ -0.88
CCDC58-202ENST00000460810 KCNV2Q8TDN2 545 aa9.58□□□□□ -0.88
CCDC58-202ENST00000460810 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
CCDC58-202ENST00000460810 ZPR1O75312 459 aa9.57□□□□□ -0.88
CCDC58-202ENST00000460810 RBM46Q8TBY0 533 aaKnown RBP9.57□□□□□ -0.88
CCDC58-202ENST00000460810 DNAJB2P25686 324 aa9.56□□□□□ -0.88
CCDC58-202ENST00000460810 PCDHB3Q9Y5E6 796 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms