RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 KCTD12Q96CX2 325 aaKnown RBP7.83□□□□□ -1.16
SYPL1-203ENST00000460770 ZBED2Q9BTP6 218 aa7.83□□□□□ -1.16
SYPL1-203ENST00000460770 PCDHGA10Q9Y5H3 936 aa7.83□□□□□ -1.16
SYPL1-203ENST00000460770 E2F4Q16254 413 aa7.81□□□□□ -1.16
SYPL1-203ENST00000460770 PLA2G2EQ9NZK7 142 aa7.79□□□□□ -1.16
SYPL1-203ENST00000460770 RABGEF1Q9UJ41 708 aa7.79□□□□□ -1.16
SYPL1-203ENST00000460770 BHMG1C9JSJ3 638 aaPredicted RBP7.78□□□□□ -1.16
SYPL1-203ENST00000460770 PDIA6Q15084 440 aa7.78□□□□□ -1.16
SYPL1-203ENST00000460770 WNT2BQ93097 391 aa7.78□□□□□ -1.16
SYPL1-203ENST00000460770 ONECUT3O60422 494 aaPredicted RBP7.77□□□□□ -1.17
SYPL1-203ENST00000460770 C6orf132Q5T0Z8 1188 aa7.76□□□□□ -1.17
SYPL1-203ENST00000460770 LAPTM4BQ86VI4 370 aa7.76□□□□□ -1.17
SYPL1-203ENST00000460770 DDX12PQ92771 950 aa7.76□□□□□ -1.17
SYPL1-203ENST00000460770 ARIH1Q9Y4X5 557 aaPredicted RBP7.76□□□□□ -1.17
SYPL1-203ENST00000460770 PTPN5P54829 565 aa7.75□□□□□ -1.17
SYPL1-203ENST00000460770 ANKK1Q8NFD2 765 aa7.75□□□□□ -1.17
SYPL1-203ENST00000460770 MAP3K7O43318 606 aa7.74□□□□□ -1.17
SYPL1-203ENST00000460770 NBR1Q14596 966 aa7.74□□□□□ -1.17
SYPL1-203ENST00000460770 THSD4Q6ZMP0 1018 aa7.74□□□□□ -1.17
SYPL1-203ENST00000460770 COL9A1P20849 921 aa7.73□□□□□ -1.17
SYPL1-203ENST00000460770 CERKQ8TCT0 537 aa7.73□□□□□ -1.17
SYPL1-203ENST00000460770 RBM33Q96EV2 1170 aaKnown RBP7.73□□□□□ -1.17
SYPL1-203ENST00000460770 EN1Q05925 392 aaPredicted RBP7.72□□□□□ -1.17
SYPL1-203ENST00000460770 PROX2Q3B8N5 592 aa7.72□□□□□ -1.17
SYPL1-203ENST00000460770 PACS2Q86VP3 889 aa7.71□□□□□ -1.18
SYPL1-203ENST00000460770 KIAA1468Q9P260 1216 aa7.71□□□□□ -1.18
SYPL1-203ENST00000460770 TRIM6-TRIM34B2RNG4 842 aa7.7□□□□□ -1.18
SYPL1-203ENST00000460770 NYAP1Q6ZVC0 841 aa7.7□□□□□ -1.18
SYPL1-203ENST00000460770 FAM98CQ17RN3 349 aaKnown RBP7.68□□□□□ -1.18
SYPL1-203ENST00000460770 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
SYPL1-203ENST00000460770 ZFRQ96KR1 1074 aaKnown RBP7.67□□□□□ -1.18
SYPL1-203ENST00000460770 SOWAHBA6NEL2 793 aa7.66□□□□□ -1.18
SYPL1-203ENST00000460770 IFFO2Q5TF58 517 aa7.66□□□□□ -1.18
SYPL1-203ENST00000460770 LRCH3Q96II8 777 aa7.65□□□□□ -1.18
SYPL1-203ENST00000460770 NBPF26B4DH59 902 aa7.64□□□□□ -1.19
SYPL1-203ENST00000460770 PRSS12P56730 875 aa7.64□□□□□ -1.19
SYPL1-203ENST00000460770 TSR1Q2NL82 804 aaKnown RBP7.64□□□□□ -1.19
SYPL1-203ENST00000460770 P3H3Q8IVL6 736 aa7.64□□□□□ -1.19
SYPL1-203ENST00000460770 ARHGEF1Q92888 912 aaKnown RBP7.64□□□□□ -1.19
SYPL1-203ENST00000460770 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.64□□□□□ -1.19
SYPL1-203ENST00000460770 SEPT9Q9UHD8 586 aaPredicted RBP7.64□□□□□ -1.19
SYPL1-203ENST00000460770 RGS20O76081 388 aa7.63□□□□□ -1.19
SYPL1-203ENST00000460770 HDGFP51858 240 aaKnown RBP7.63□□□□□ -1.19
SYPL1-203ENST00000460770 CDCA7LQ96GN5 454 aa7.63□□□□□ -1.19
SYPL1-203ENST00000460770 BCAMP50895 628 aa7.62□□□□□ -1.19
SYPL1-203ENST00000460770 TSHZ2Q9NRE2 1034 aa7.62□□□□□ -1.19
SYPL1-203ENST00000460770 RBM27Q9P2N5 1060 aaKnown RBP7.62□□□□□ -1.19
SYPL1-203ENST00000460770 TSR3Q9UJK0 312 aaKnown RBP7.61□□□□□ -1.19
SYPL1-203ENST00000460770 OSBPP22059 807 aa7.6□□□□□ -1.19
SYPL1-203ENST00000460770 SLC4A3P48751 1232 aa7.6□□□□□ -1.19
SYPL1-203ENST00000460770 NECTIN2Q92692 538 aa7.6□□□□□ -1.19
SYPL1-203ENST00000460770 TSKSQ9UJT2 592 aa7.6□□□□□ -1.19
SYPL1-203ENST00000460770 HPS5Q9UPZ3 1129 aa7.59□□□□□ -1.19
SYPL1-203ENST00000460770 ITGBL1O95965 494 aaPredicted RBP7.58□□□□□ -1.2
SYPL1-203ENST00000460770 PPP4CP60510 307 aa7.58□□□□□ -1.2
SYPL1-203ENST00000460770 WBP1LQ9NX94 342 aa7.58□□□□□ -1.2
SYPL1-203ENST00000460770 TATDN2Q93075 761 aa7.57□□□□□ -1.2
SYPL1-203ENST00000460770 PNMA3Q9UL41 463 aa7.57□□□□□ -1.2
SYPL1-203ENST00000460770 A0A0G2JS52 829 aa7.56□□□□□ -1.2
SYPL1-203ENST00000460770 KCNC4Q03721 635 aa7.56□□□□□ -1.2
SYPL1-203ENST00000460770 KCNV2Q8TDN2 545 aa7.55□□□□□ -1.2
SYPL1-203ENST00000460770 SAMD7Q7Z3H4 446 aa7.54□□□□□ -1.2
SYPL1-203ENST00000460770 PRIM1P49642 420 aaKnown RBP7.53□□□□□ -1.2
SYPL1-203ENST00000460770 NUDT18Q6ZVK8 323 aa7.53□□□□□ -1.2
SYPL1-203ENST00000460770 CDHR5Q9HBB8 845 aa7.53□□□□□ -1.2
SYPL1-203ENST00000460770 SMAPO00193 183 aa7.52□□□□□ -1.21
SYPL1-203ENST00000460770 PLCB2Q00722 1185 aa7.52□□□□□ -1.21
SYPL1-203ENST00000460770 RNF40O75150 1001 aa7.51□□□□□ -1.21
SYPL1-203ENST00000460770 SLF2Q8IX21 1173 aa7.51□□□□□ -1.21
SYPL1-203ENST00000460770 SMYD5Q6GMV2 418 aa7.5□□□□□ -1.21
SYPL1-203ENST00000460770 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
SYPL1-203ENST00000460770 TTC13Q8NBP0 860 aa7.5□□□□□ -1.21
SYPL1-203ENST00000460770 FAM198AQ9UFP1 575 aa7.5□□□□□ -1.21
SYPL1-203ENST00000460770 MLLT3P42568 568 aaPredicted RBP7.49□□□□□ -1.21
SYPL1-203ENST00000460770 PRR14Q9BWN1 585 aa7.49□□□□□ -1.21
SYPL1-203ENST00000460770 NUTM2FA1L443 756 aa7.48□□□□□ -1.21
SYPL1-203ENST00000460770 RBM46Q8TBY0 533 aaKnown RBP7.48□□□□□ -1.21
SYPL1-203ENST00000460770 NPDC1Q9NQX5 325 aaPredicted RBP7.48□□□□□ -1.21
SYPL1-203ENST00000460770 IL21Q9HBE4 155 aa7.47□□□□□ -1.21
SYPL1-203ENST00000460770 FCHSD2O94868 740 aa7.46□□□□□ -1.22
SYPL1-203ENST00000460770 PTGDRQ13258 359 aa7.46□□□□□ -1.22
SYPL1-203ENST00000460770 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.22
SYPL1-203ENST00000460770 DNAJB2P25686 324 aa7.44□□□□□ -1.22
SYPL1-203ENST00000460770 SWT1Q5T5J6 900 aaKnown RBP7.44□□□□□ -1.22
SYPL1-203ENST00000460770 EYA1Q99502 592 aa7.43□□□□□ -1.22
SYPL1-203ENST00000460770 C3orf80F5H4A9 247 aa7.42□□□□□ -1.22
SYPL1-203ENST00000460770 SEMA3EO15041 775 aa7.42□□□□□ -1.22
SYPL1-203ENST00000460770 OATP04181 439 aa7.42□□□□□ -1.22
SYPL1-203ENST00000460770 GGCXP38435 758 aa7.42□□□□□ -1.22
SYPL1-203ENST00000460770 TJAP1Q5JTD0 557 aa7.42□□□□□ -1.22
SYPL1-203ENST00000460770 MTRQ99707 1265 aa7.42□□□□□ -1.22
SYPL1-203ENST00000460770 HAP1P54257 671 aaPredicted RBP7.41□□□□□ -1.22
SYPL1-203ENST00000460770 RSPH4AQ5TD94 716 aa7.41□□□□□ -1.22
SYPL1-203ENST00000460770 ADGRG1Q9Y653 693 aa7.41□□□□□ -1.22
SYPL1-203ENST00000460770 APLP1P51693 650 aa7.4□□□□□ -1.22
SYPL1-203ENST00000460770 HIC1Q14526 733 aa7.4□□□□□ -1.22
SYPL1-203ENST00000460770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.39□□□□□ -1.23
SYPL1-203ENST00000460770 TULP1O00294 542 aaPredicted RBP7.39□□□□□ -1.23
SYPL1-203ENST00000460770 LAPTM4AQ15012 233 aa7.39□□□□□ -1.23
SYPL1-203ENST00000460770 KMT5BQ4FZB7 885 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms