RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 NBR1Q14596 966 aa12.23□□□□□ -0.45
FAM228B-201ENST00000460686 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
FAM228B-201ENST00000460686 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
FAM228B-201ENST00000460686 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
FAM228B-201ENST00000460686 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
FAM228B-201ENST00000460686 PPP1R3GB7ZBB8 358 aa12.18□□□□□ -0.46
FAM228B-201ENST00000460686 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
FAM228B-201ENST00000460686 ZBED2Q9BTP6 218 aa12.18□□□□□ -0.46
FAM228B-201ENST00000460686 MAP3K7O43318 606 aa12.17□□□□□ -0.46
FAM228B-201ENST00000460686 HRO43593 1189 aa12.17□□□□□ -0.46
FAM228B-201ENST00000460686 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
FAM228B-201ENST00000460686 SLC4A5Q9BY07 1137 aa12.17□□□□□ -0.46
FAM228B-201ENST00000460686 COL9A1P20849 921 aa12.16□□□□□ -0.46
FAM228B-201ENST00000460686 P3H3Q8IVL6 736 aa12.16□□□□□ -0.46
FAM228B-201ENST00000460686 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
FAM228B-201ENST00000460686 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
FAM228B-201ENST00000460686 TSR1Q2NL82 804 aaKnown RBP12.11□□□□□ -0.47
FAM228B-201ENST00000460686 MRPL50Q8N5N7 158 aaKnown RBP12.09□□□□□ -0.47
FAM228B-201ENST00000460686 NBPF3Q9H094 633 aa12.09□□□□□ -0.47
FAM228B-201ENST00000460686 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
FAM228B-201ENST00000460686 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
FAM228B-201ENST00000460686 OSBPP22059 807 aa12.07□□□□□ -0.48
FAM228B-201ENST00000460686 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
FAM228B-201ENST00000460686 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
FAM228B-201ENST00000460686 RABGEF1Q9UJ41 708 aa12.06□□□□□ -0.48
FAM228B-201ENST00000460686 MLLT3P42568 568 aaPredicted RBP12.05□□□□□ -0.48
FAM228B-201ENST00000460686 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
FAM228B-201ENST00000460686 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
FAM228B-201ENST00000460686 TRIM6-TRIM34B2RNG4 842 aa12.02□□□□□ -0.49
FAM228B-201ENST00000460686 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
FAM228B-201ENST00000460686 CDHR5Q9HBB8 845 aa12.01□□□□□ -0.49
FAM228B-201ENST00000460686 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
FAM228B-201ENST00000460686 CERKQ8TCT0 537 aa12□□□□□ -0.49
FAM228B-201ENST00000460686 WNT2BQ93097 391 aa12□□□□□ -0.49
FAM228B-201ENST00000460686 SEMA3EO15041 775 aa11.99□□□□□ -0.49
FAM228B-201ENST00000460686 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
FAM228B-201ENST00000460686 PACS2Q86VP3 889 aa11.98□□□□□ -0.49
FAM228B-201ENST00000460686 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
FAM228B-201ENST00000460686 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
FAM228B-201ENST00000460686 PTPN5P54829 565 aa11.97□□□□□ -0.49
FAM228B-201ENST00000460686 PRSS12P56730 875 aa11.97□□□□□ -0.49
FAM228B-201ENST00000460686 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
FAM228B-201ENST00000460686 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
FAM228B-201ENST00000460686 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
FAM228B-201ENST00000460686 THSD4Q6ZMP0 1018 aa11.94□□□□□ -0.5
FAM228B-201ENST00000460686 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
FAM228B-201ENST00000460686 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
FAM228B-201ENST00000460686 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
FAM228B-201ENST00000460686 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
FAM228B-201ENST00000460686 SMAPO00193 183 aa11.9□□□□□ -0.5
FAM228B-201ENST00000460686 FAM198AQ9UFP1 575 aa11.9□□□□□ -0.5
FAM228B-201ENST00000460686 SMYD5Q6GMV2 418 aa11.89□□□□□ -0.51
FAM228B-201ENST00000460686 NPDC1Q9NQX5 325 aaPredicted RBP11.89□□□□□ -0.51
FAM228B-201ENST00000460686 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
FAM228B-201ENST00000460686 TESPA1A2RU30 521 aaPredicted RBP11.88□□□□□ -0.51
FAM228B-201ENST00000460686 BCAMP50895 628 aa11.88□□□□□ -0.51
FAM228B-201ENST00000460686 PADI6Q6TGC4 694 aa11.88□□□□□ -0.51
FAM228B-201ENST00000460686 RBM27Q9P2N5 1060 aaKnown RBP11.88□□□□□ -0.51
FAM228B-201ENST00000460686 TATDN2Q93075 761 aa11.86□□□□□ -0.51
FAM228B-201ENST00000460686 SOWAHBA6NEL2 793 aa11.85□□□□□ -0.51
FAM228B-201ENST00000460686 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
FAM228B-201ENST00000460686 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
FAM228B-201ENST00000460686 PTGDRQ13258 359 aa11.84□□□□□ -0.51
FAM228B-201ENST00000460686 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
FAM228B-201ENST00000460686 C3orf80F5H4A9 247 aa11.83□□□□□ -0.52
FAM228B-201ENST00000460686 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
FAM228B-201ENST00000460686 RBM26Q5T8P6 1007 aaKnown RBP11.82□□□□□ -0.52
FAM228B-201ENST00000460686 FCHSD2O94868 740 aa11.81□□□□□ -0.52
FAM228B-201ENST00000460686 TTC13Q8NBP0 860 aa11.81□□□□□ -0.52
FAM228B-201ENST00000460686 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
FAM228B-201ENST00000460686 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
FAM228B-201ENST00000460686 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
FAM228B-201ENST00000460686 RNF40O75150 1001 aa11.77□□□□□ -0.53
FAM228B-201ENST00000460686 WBP1LQ9NX94 342 aa11.77□□□□□ -0.53
FAM228B-201ENST00000460686 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.53
FAM228B-201ENST00000460686 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
FAM228B-201ENST00000460686 PPP4CP60510 307 aa11.74□□□□□ -0.53
FAM228B-201ENST00000460686 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
FAM228B-201ENST00000460686 HIC1Q14526 733 aa11.72□□□□□ -0.53
FAM228B-201ENST00000460686 FAM161AQ3B820 660 aa11.72□□□□□ -0.53
FAM228B-201ENST00000460686 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
FAM228B-201ENST00000460686 EYA1Q99502 592 aa11.72□□□□□ -0.53
FAM228B-201ENST00000460686 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.53
FAM228B-201ENST00000460686 GPIHBP1Q8IV16 184 aa11.71□□□□□ -0.53
FAM228B-201ENST00000460686 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
FAM228B-201ENST00000460686 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
FAM228B-201ENST00000460686 GNPATO15228 680 aa11.67□□□□□ -0.54
FAM228B-201ENST00000460686 DNAJB2P25686 324 aa11.67□□□□□ -0.54
FAM228B-201ENST00000460686 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
FAM228B-201ENST00000460686 RCCD1A6NED2 376 aa11.64□□□□□ -0.55
FAM228B-201ENST00000460686 GPR37O15354 613 aa11.64□□□□□ -0.55
FAM228B-201ENST00000460686 FECHP22830 423 aa11.64□□□□□ -0.55
FAM228B-201ENST00000460686 OATP04181 439 aa11.63□□□□□ -0.55
FAM228B-201ENST00000460686 NECTIN2Q92692 538 aa11.63□□□□□ -0.55
FAM228B-201ENST00000460686 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
FAM228B-201ENST00000460686 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
FAM228B-201ENST00000460686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.6□□□□□ -0.55
FAM228B-201ENST00000460686 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
FAM228B-201ENST00000460686 KCNC4Q03721 635 aa11.59□□□□□ -0.55
FAM228B-201ENST00000460686 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms