RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 IPO8O15397 1037 aaKnown RBP22.69■■□□□ 1.22
CHRD-208ENST00000460627 CSB-PGBD3P0DP91 1061 aa22.69■■□□□ 1.22
CHRD-208ENST00000460627 C9orf84Q5VXU9 1444 aa22.68■■□□□ 1.22
CHRD-208ENST00000460627 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
CHRD-208ENST00000460627 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
CHRD-208ENST00000460627 EPRSP07814 1512 aaKnown RBP22.66■■□□□ 1.22
CHRD-208ENST00000460627 CGNL1Q0VF96 1302 aa22.65■■□□□ 1.22
CHRD-208ENST00000460627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
CHRD-208ENST00000460627 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
CHRD-208ENST00000460627 ERICH6BQ5W0A0 696 aa22.64■■□□□ 1.21
CHRD-208ENST00000460627 RCAN3Q9UKA8 241 aa22.64■■□□□ 1.21
CHRD-208ENST00000460627 NUTM2FA1L443 756 aa22.64■■□□□ 1.21
CHRD-208ENST00000460627 RGS3P49796 1198 aa22.63■■□□□ 1.21
CHRD-208ENST00000460627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
CHRD-208ENST00000460627 AMPHP49418 695 aa22.63■■□□□ 1.21
CHRD-208ENST00000460627 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
CHRD-208ENST00000460627 MINK1Q8N4C8 1332 aaPredicted RBP22.62■■□□□ 1.21
CHRD-208ENST00000460627 GOLGA2Q08379 1002 aa22.62■■□□□ 1.21
CHRD-208ENST00000460627 PRKRIP1Q9H875 184 aaPredicted RBP22.62■■□□□ 1.21
CHRD-208ENST00000460627 LMOD3Q0VAK6 560 aa22.61■■□□□ 1.21
CHRD-208ENST00000460627 OS9Q13438 667 aaPredicted RBP22.61■■□□□ 1.21
CHRD-208ENST00000460627 CENPJQ9HC77 1338 aaPredicted RBP22.61■■□□□ 1.21
CHRD-208ENST00000460627 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
CHRD-208ENST00000460627 SCAPERQ9BY12 1400 aa22.6■■□□□ 1.21
CHRD-208ENST00000460627 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
CHRD-208ENST00000460627 NPHP1O15259 732 aa22.57■■□□□ 1.2
CHRD-208ENST00000460627 COG3Q96JB2 828 aa22.57■■□□□ 1.2
CHRD-208ENST00000460627 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
CHRD-208ENST00000460627 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
CHRD-208ENST00000460627 DAPK1P53355 1430 aa22.55■■□□□ 1.2
CHRD-208ENST00000460627 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
CHRD-208ENST00000460627 KIAA1107Q9UPP5 1409 aa22.54■■□□□ 1.2
CHRD-208ENST00000460627 STK31Q9BXU1 1019 aa22.52■■□□□ 1.2
CHRD-208ENST00000460627 MAP3K1Q13233 1512 aa22.51■■□□□ 1.19
CHRD-208ENST00000460627 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
CHRD-208ENST00000460627 PLB1Q6P1J6 1458 aa22.5■■□□□ 1.19
CHRD-208ENST00000460627 ROCK1Q13464 1354 aa22.49■■□□□ 1.19
CHRD-208ENST00000460627 CCDC7Q96M83 1385 aa22.49■■□□□ 1.19
CHRD-208ENST00000460627 SLC52A1Q9NWF4 448 aa22.49■■□□□ 1.19
CHRD-208ENST00000460627 PCF11O94913 1555 aaKnown RBP22.48■■□□□ 1.19
CHRD-208ENST00000460627 GOLGA6L22H0YM25 854 aa22.47■■□□□ 1.19
CHRD-208ENST00000460627 RAPGEF3O95398 923 aa22.47■■□□□ 1.19
CHRD-208ENST00000460627 CFAP44Q96MT7 982 aa22.47■■□□□ 1.19
CHRD-208ENST00000460627 KIF7Q2M1P5 1343 aa22.47■■□□□ 1.19
CHRD-208ENST00000460627 NBR1Q14596 966 aa22.46■■□□□ 1.19
CHRD-208ENST00000460627 LTV1Q96GA3 475 aaPredicted RBP22.46■■□□□ 1.19
CHRD-208ENST00000460627 SMC4Q9NTJ3 1288 aa22.46■■□□□ 1.19
CHRD-208ENST00000460627 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
CHRD-208ENST00000460627 HDAC5Q9UQL6 1122 aa22.45■■□□□ 1.18
CHRD-208ENST00000460627 NCLP19338 710 aaKnown RBP22.44■■□□□ 1.18
CHRD-208ENST00000460627 RWDD1Q9H446 243 aaPredicted RBP22.44■■□□□ 1.18
CHRD-208ENST00000460627 CFAP70Q5T0N1 1121 aa22.44■■□□□ 1.18
CHRD-208ENST00000460627 ANP32EQ9BTT0 268 aa22.43■■□□□ 1.18
CHRD-208ENST00000460627 CCDC141Q6ZP82 1450 aa22.43■■□□□ 1.18
CHRD-208ENST00000460627 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
CHRD-208ENST00000460627 ITPRIPQ8IWB1 547 aa22.43■■□□□ 1.18
CHRD-208ENST00000460627 TMEM132EQ6IEE7 984 aa22.41■■□□□ 1.18
CHRD-208ENST00000460627 NAIPQ13075 1403 aa22.41■■□□□ 1.18
CHRD-208ENST00000460627 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
CHRD-208ENST00000460627 CCDC9Q9Y3X0 531 aaKnown RBP22.39■■□□□ 1.18
CHRD-208ENST00000460627 KCNJ4P48050 445 aa22.39■■□□□ 1.17
CHRD-208ENST00000460627 TXNDC2Q86VQ3 553 aa22.38■■□□□ 1.17
CHRD-208ENST00000460627 DIAPH1O60610 1272 aaKnown RBP22.38■■□□□ 1.17
CHRD-208ENST00000460627 THEMISQ8N1K5 641 aaPredicted RBP22.37■■□□□ 1.17
CHRD-208ENST00000460627 PMFBP1Q8TBY8 1022 aa22.37■■□□□ 1.17
CHRD-208ENST00000460627 PSME1Q06323 249 aa22.36■■□□□ 1.17
CHRD-208ENST00000460627 E9PSI1 815 aa22.36■■□□□ 1.17
CHRD-208ENST00000460627 ZBED9Q6R2W3 1325 aa22.36■■□□□ 1.17
CHRD-208ENST00000460627 RRP7AQ9Y3A4 280 aaKnown RBP22.35■■□□□ 1.17
CHRD-208ENST00000460627 POGZQ7Z3K3 1410 aa22.35■■□□□ 1.17
CHRD-208ENST00000460627 RPGRIP1LQ68CZ1 1315 aa22.35■■□□□ 1.17
CHRD-208ENST00000460627 CNTLNQ9NXG0 1405 aa22.35■■□□□ 1.17
CHRD-208ENST00000460627 KIF14Q15058 1648 aa22.34■■□□□ 1.17
CHRD-208ENST00000460627 HMMRO75330 724 aa22.33■■□□□ 1.17
CHRD-208ENST00000460627 CAMSAP2Q08AD1 1489 aa22.33■■□□□ 1.17
CHRD-208ENST00000460627 ANKRD30BQ9BXX2 1392 aa22.33■■□□□ 1.16
CHRD-208ENST00000460627 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.16
CHRD-208ENST00000460627 FGD1P98174 961 aa22.32■■□□□ 1.16
CHRD-208ENST00000460627 APAF1O14727 1248 aa22.31■■□□□ 1.16
CHRD-208ENST00000460627 ATF3P18847 181 aa22.31■■□□□ 1.16
CHRD-208ENST00000460627 MCCP23508 829 aa22.31■■□□□ 1.16
CHRD-208ENST00000460627 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
CHRD-208ENST00000460627 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
CHRD-208ENST00000460627 CABP2Q9NPB3 220 aa22.3■■□□□ 1.16
CHRD-208ENST00000460627 ABCC5O15440 1437 aa22.3■■□□□ 1.16
CHRD-208ENST00000460627 C1orf141Q5JVX7 400 aa22.3■■□□□ 1.16
CHRD-208ENST00000460627 CLUAP1Q96AJ1 413 aa22.3■■□□□ 1.16
CHRD-208ENST00000460627 NBPF8Q3BBV2 869 aa22.28■■□□□ 1.16
CHRD-208ENST00000460627 TCERG1O14776 1098 aaKnown RBP22.28■■□□□ 1.16
CHRD-208ENST00000460627 ADGRL1O94910 1474 aa22.28■■□□□ 1.16
CHRD-208ENST00000460627 TEFQ10587 303 aa22.28■■□□□ 1.16
CHRD-208ENST00000460627 APBB1O00213 710 aa22.28■■□□□ 1.16
CHRD-208ENST00000460627 HSP90AB1P08238 724 aaKnown RBP22.27■■□□□ 1.16
CHRD-208ENST00000460627 PTPN23Q9H3S7 1636 aa22.27■■□□□ 1.16
CHRD-208ENST00000460627 SLC4A10Q6U841 1118 aa22.26■■□□□ 1.15
CHRD-208ENST00000460627 GGNBP2Q9H3C7 697 aa22.25■■□□□ 1.15
CHRD-208ENST00000460627 AKNAQ7Z591 1439 aa22.25■■□□□ 1.15
CHRD-208ENST00000460627 EVA1CP58658 441 aa22.25■■□□□ 1.15
CHRD-208ENST00000460627 PRAM1Q96QH2 718 aa22.25■■□□□ 1.15
CHRD-208ENST00000460627 RUNDC1Q96C34 613 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms