RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 C6orf132Q5T0Z8 1188 aa13.76□□□□□ -0.21
CCDC66-209ENST00000459746 MAP3K7O43318 606 aa13.75□□□□□ -0.21
CCDC66-209ENST00000459746 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
CCDC66-209ENST00000459746 CERKQ8TCT0 537 aa13.73□□□□□ -0.21
CCDC66-209ENST00000459746 KCNK17Q96T54 332 aa13.72□□□□□ -0.21
CCDC66-209ENST00000459746 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
CCDC66-209ENST00000459746 PPP1R3GB7ZBB8 358 aa13.69□□□□□ -0.22
CCDC66-209ENST00000459746 SLC4A5Q9BY07 1137 aa13.69□□□□□ -0.22
CCDC66-209ENST00000459746 AXIN2Q9Y2T1 843 aa13.69□□□□□ -0.22
CCDC66-209ENST00000459746 PSEN2P49810 448 aa13.68□□□□□ -0.22
CCDC66-209ENST00000459746 LSM11P83369 360 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC66-209ENST00000459746 TK2O00142 265 aa13.67□□□□□ -0.22
CCDC66-209ENST00000459746 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
CCDC66-209ENST00000459746 KRTAP3-3Q9BYR6 98 aa13.67□□□□□ -0.22
CCDC66-209ENST00000459746 KRTAP3-2Q9BYR7 98 aa13.67□□□□□ -0.22
CCDC66-209ENST00000459746 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
CCDC66-209ENST00000459746 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
CCDC66-209ENST00000459746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC66-209ENST00000459746 ONECUT3O60422 494 aaPredicted RBP13.63□□□□□ -0.23
CCDC66-209ENST00000459746 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
CCDC66-209ENST00000459746 SPNS2Q8IVW8 549 aa13.63□□□□□ -0.23
CCDC66-209ENST00000459746 DMRTA1Q5VZB9 504 aa13.62□□□□□ -0.23
CCDC66-209ENST00000459746 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
CCDC66-209ENST00000459746 COL9A1P20849 921 aa13.61□□□□□ -0.23
CCDC66-209ENST00000459746 ZBED2Q9BTP6 218 aa13.61□□□□□ -0.23
CCDC66-209ENST00000459746 FCHSD2O94868 740 aa13.6□□□□□ -0.23
CCDC66-209ENST00000459746 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
CCDC66-209ENST00000459746 NPDC1Q9NQX5 325 aaPredicted RBP13.59□□□□□ -0.23
CCDC66-209ENST00000459746 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
CCDC66-209ENST00000459746 PTGDRQ13258 359 aa13.58□□□□□ -0.24
CCDC66-209ENST00000459746 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
CCDC66-209ENST00000459746 VPS9D1Q9Y2B5 631 aa13.58□□□□□ -0.24
CCDC66-209ENST00000459746 PRSS12P56730 875 aa13.57□□□□□ -0.24
CCDC66-209ENST00000459746 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
CCDC66-209ENST00000459746 GPIHBP1Q8IV16 184 aa13.56□□□□□ -0.24
CCDC66-209ENST00000459746 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
CCDC66-209ENST00000459746 PACS2Q86VP3 889 aa13.55□□□□□ -0.24
CCDC66-209ENST00000459746 CDCA7LQ96GN5 454 aa13.55□□□□□ -0.24
CCDC66-209ENST00000459746 RABGEF1Q9UJ41 708 aa13.55□□□□□ -0.24
CCDC66-209ENST00000459746 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
CCDC66-209ENST00000459746 HIC1Q14526 733 aa13.54□□□□□ -0.24
CCDC66-209ENST00000459746 STAC3Q96MF2 364 aa13.53□□□□□ -0.24
CCDC66-209ENST00000459746 HRO43593 1189 aa13.5□□□□□ -0.25
CCDC66-209ENST00000459746 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
CCDC66-209ENST00000459746 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
CCDC66-209ENST00000459746 TTC13Q8NBP0 860 aa13.49□□□□□ -0.25
CCDC66-209ENST00000459746 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
CCDC66-209ENST00000459746 BHMG1C9JSJ3 638 aaPredicted RBP13.48□□□□□ -0.25
CCDC66-209ENST00000459746 GNPATO15228 680 aa13.48□□□□□ -0.25
CCDC66-209ENST00000459746 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
CCDC66-209ENST00000459746 LAPTM4BQ86VI4 370 aa13.46□□□□□ -0.25
CCDC66-209ENST00000459746 GPR37O15354 613 aa13.45□□□□□ -0.26
CCDC66-209ENST00000459746 PADI6Q6TGC4 694 aa13.45□□□□□ -0.26
CCDC66-209ENST00000459746 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
CCDC66-209ENST00000459746 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
CCDC66-209ENST00000459746 TATDN2Q93075 761 aa13.41□□□□□ -0.26
CCDC66-209ENST00000459746 OATP04181 439 aa13.4□□□□□ -0.26
CCDC66-209ENST00000459746 ZC3H15Q8WU90 426 aaKnown RBP13.4□□□□□ -0.26
CCDC66-209ENST00000459746 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
CCDC66-209ENST00000459746 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
CCDC66-209ENST00000459746 GOLGA8CPA6NN73 597 aa13.38□□□□□ -0.27
CCDC66-209ENST00000459746 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
CCDC66-209ENST00000459746 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
CCDC66-209ENST00000459746 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
CCDC66-209ENST00000459746 ZMYND10O75800 440 aa13.37□□□□□ -0.27
CCDC66-209ENST00000459746 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
CCDC66-209ENST00000459746 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
CCDC66-209ENST00000459746 NUDT18Q6ZVK8 323 aa13.36□□□□□ -0.27
CCDC66-209ENST00000459746 ADGRG1Q9Y653 693 aa13.36□□□□□ -0.27
CCDC66-209ENST00000459746 MAP2K5Q13163 448 aa13.35□□□□□ -0.27
CCDC66-209ENST00000459746 HDGFP51858 240 aaKnown RBP13.34□□□□□ -0.27
CCDC66-209ENST00000459746 EYA1Q99502 592 aa13.34□□□□□ -0.27
CCDC66-209ENST00000459746 FECHP22830 423 aa13.33□□□□□ -0.28
CCDC66-209ENST00000459746 IRF6O14896 467 aa13.32□□□□□ -0.28
CCDC66-209ENST00000459746 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
CCDC66-209ENST00000459746 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
CCDC66-209ENST00000459746 SEPT9Q9UHD8 586 aaPredicted RBP13.32□□□□□ -0.28
CCDC66-209ENST00000459746 SMAPO00193 183 aa13.29□□□□□ -0.28
CCDC66-209ENST00000459746 ANKK1Q8NFD2 765 aa13.29□□□□□ -0.28
CCDC66-209ENST00000459746 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
CCDC66-209ENST00000459746 PXYLP1Q8TE99 480 aa13.28□□□□□ -0.28
CCDC66-209ENST00000459746 WNT2BQ93097 391 aa13.28□□□□□ -0.28
CCDC66-209ENST00000459746 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
CCDC66-209ENST00000459746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
CCDC66-209ENST00000459746 DNAJB2P25686 324 aa13.27□□□□□ -0.29
CCDC66-209ENST00000459746 METTL3Q86U44 580 aaKnown RBP13.27□□□□□ -0.29
CCDC66-209ENST00000459746 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
CCDC66-209ENST00000459746 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
CCDC66-209ENST00000459746 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
CCDC66-209ENST00000459746 KCTD12Q96CX2 325 aaKnown RBP13.23□□□□□ -0.29
CCDC66-209ENST00000459746 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
CCDC66-209ENST00000459746 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
CCDC66-209ENST00000459746 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
CCDC66-209ENST00000459746 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
CCDC66-209ENST00000459746 TMEM134Q9H6X4 195 aa13.21□□□□□ -0.29
CCDC66-209ENST00000459746 THSD4Q6ZMP0 1018 aa13.2□□□□□ -0.3
CCDC66-209ENST00000459746 SAMD7Q7Z3H4 446 aa13.2□□□□□ -0.3
CCDC66-209ENST00000459746 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
CCDC66-209ENST00000459746 AK7Q96M32 723 aa13.2□□□□□ -0.3
CCDC66-209ENST00000459746 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms