RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 NAIPQ13075 1403 aa12.99□□□□□ -0.33
CLTCL1-204ENST00000458188 ANKRD50Q9ULJ7 1429 aa12.98□□□□□ -0.33
CLTCL1-204ENST00000458188 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
CLTCL1-204ENST00000458188 CROCC2H7BZ55 1655 aa12.98□□□□□ -0.33
CLTCL1-204ENST00000458188 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
CLTCL1-204ENST00000458188 ARHGEF40Q8TER5 1519 aa12.97□□□□□ -0.33
CLTCL1-204ENST00000458188 SPATA31D1Q6ZQQ2 1576 aa12.96□□□□□ -0.33
CLTCL1-204ENST00000458188 HFM1A2PYH4 1435 aa12.96□□□□□ -0.34
CLTCL1-204ENST00000458188 SETD5Q9C0A6 1442 aa12.96□□□□□ -0.34
CLTCL1-204ENST00000458188 DUOX2Q9NRD8 1548 aa12.95□□□□□ -0.34
CLTCL1-204ENST00000458188 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
CLTCL1-204ENST00000458188 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
CLTCL1-204ENST00000458188 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
CLTCL1-204ENST00000458188 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
CLTCL1-204ENST00000458188 ADGBQ8N7X0 1667 aa12.92□□□□□ -0.34
CLTCL1-204ENST00000458188 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
CLTCL1-204ENST00000458188 ESF1Q9H501 851 aaKnown RBP12.91□□□□□ -0.34
CLTCL1-204ENST00000458188 NUP155O75694 1391 aa12.91□□□□□ -0.34
CLTCL1-204ENST00000458188 CEBPAP49715 358 aaPredicted RBP12.9□□□□□ -0.34
CLTCL1-204ENST00000458188 AGLP35573 1532 aa12.88□□□□□ -0.35
CLTCL1-204ENST00000458188 FOXD1Q16676 465 aa12.88□□□□□ -0.35
CLTCL1-204ENST00000458188 REREQ9P2R6 1566 aa12.87□□□□□ -0.35
CLTCL1-204ENST00000458188 KANK1Q14678 1352 aa12.86□□□□□ -0.35
CLTCL1-204ENST00000458188 MPHOSPH9Q99550 1183 aa12.86□□□□□ -0.35
CLTCL1-204ENST00000458188 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-204ENST00000458188 FBXO31Q5XUX0 539 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-204ENST00000458188 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
CLTCL1-204ENST00000458188 PREX1Q8TCU6 1659 aa12.84□□□□□ -0.35
CLTCL1-204ENST00000458188 PKD2Q13563 968 aa12.84□□□□□ -0.35
CLTCL1-204ENST00000458188 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.35
CLTCL1-204ENST00000458188 ZMYM3Q14202 1370 aa12.83□□□□□ -0.36
CLTCL1-204ENST00000458188 HRCP23327 699 aa12.83□□□□□ -0.36
CLTCL1-204ENST00000458188 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
CLTCL1-204ENST00000458188 MROH1Q8NDA8 1641 aa12.82□□□□□ -0.36
CLTCL1-204ENST00000458188 SETD1BQ9UPS6 1966 aaKnown RBP12.81□□□□□ -0.36
CLTCL1-204ENST00000458188 EIF2AK4Q9P2K8 1649 aaKnown RBP12.81□□□□□ -0.36
CLTCL1-204ENST00000458188 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
CLTCL1-204ENST00000458188 PZPP20742 1482 aa12.8□□□□□ -0.36
CLTCL1-204ENST00000458188 ABCC3O15438 1527 aa12.8□□□□□ -0.36
CLTCL1-204ENST00000458188 RNF17Q9BXT8 1623 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-204ENST00000458188 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
CLTCL1-204ENST00000458188 PRDM15P57071 1507 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-204ENST00000458188 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
CLTCL1-204ENST00000458188 PTPRTO14522 1441 aa12.78□□□□□ -0.36
CLTCL1-204ENST00000458188 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
CLTCL1-204ENST00000458188 UNC13BO14795 1591 aa12.77□□□□□ -0.36
CLTCL1-204ENST00000458188 IQSEC2Q5JU85 1478 aa12.77□□□□□ -0.37
CLTCL1-204ENST00000458188 VWDEQ8N2E2 1590 aa12.77□□□□□ -0.37
CLTCL1-204ENST00000458188 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
CLTCL1-204ENST00000458188 NPATQ14207 1427 aa12.76□□□□□ -0.37
CLTCL1-204ENST00000458188 CNTLNQ9NXG0 1405 aa12.76□□□□□ -0.37
CLTCL1-204ENST00000458188 CLTCQ00610 1675 aaKnown RBP12.76□□□□□ -0.37
CLTCL1-204ENST00000458188 DHX57Q6P158 1386 aaKnown RBP12.75□□□□□ -0.37
CLTCL1-204ENST00000458188 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-204ENST00000458188 CEP152O94986 1710 aa12.74□□□□□ -0.37
CLTCL1-204ENST00000458188 LMTK2Q8IWU2 1503 aa12.73□□□□□ -0.37
CLTCL1-204ENST00000458188 UBAP1LF5GYI3 381 aa12.73□□□□□ -0.37
CLTCL1-204ENST00000458188 CHGAP10645 457 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-204ENST00000458188 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-204ENST00000458188 SIN3AQ96ST3 1273 aa12.73□□□□□ -0.37
CLTCL1-204ENST00000458188 IQGAP3Q86VI3 1631 aa12.73□□□□□ -0.37
CLTCL1-204ENST00000458188 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
CLTCL1-204ENST00000458188 ARHGAP31Q2M1Z3 1444 aa12.71□□□□□ -0.37
CLTCL1-204ENST00000458188 IDI1Q13907 227 aa12.71□□□□□ -0.37
CLTCL1-204ENST00000458188 TNRQ92752 1358 aa12.7□□□□□ -0.38
CLTCL1-204ENST00000458188 CAMSAP1Q5T5Y3 1602 aa12.7□□□□□ -0.38
CLTCL1-204ENST00000458188 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
CLTCL1-204ENST00000458188 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
CLTCL1-204ENST00000458188 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
CLTCL1-204ENST00000458188 ERVK-7P63135 1459 aa12.69□□□□□ -0.38
CLTCL1-204ENST00000458188 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
CLTCL1-204ENST00000458188 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
CLTCL1-204ENST00000458188 NOS1P29475 1434 aa12.68□□□□□ -0.38
CLTCL1-204ENST00000458188 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
CLTCL1-204ENST00000458188 E9PCH4 1651 aa12.67□□□□□ -0.38
CLTCL1-204ENST00000458188 TET3O43151 1660 aa12.67□□□□□ -0.38
CLTCL1-204ENST00000458188 RGL3Q3MIN7 710 aa12.67□□□□□ -0.38
CLTCL1-204ENST00000458188 UGGT1Q9NYU2 1555 aa12.67□□□□□ -0.38
CLTCL1-204ENST00000458188 C3P01024 1663 aa12.67□□□□□ -0.38
CLTCL1-204ENST00000458188 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
CLTCL1-204ENST00000458188 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
CLTCL1-204ENST00000458188 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.38
CLTCL1-204ENST00000458188 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
CLTCL1-204ENST00000458188 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
CLTCL1-204ENST00000458188 MROH2AA6NES4 1674 aa12.64□□□□□ -0.39
CLTCL1-204ENST00000458188 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-204ENST00000458188 CFAP65Q6ZU64 1925 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-204ENST00000458188 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
CLTCL1-204ENST00000458188 SYNMO15061 1565 aa12.63□□□□□ -0.39
CLTCL1-204ENST00000458188 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
CLTCL1-204ENST00000458188 ZNF335Q9H4Z2 1342 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-204ENST00000458188 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
CLTCL1-204ENST00000458188 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
CLTCL1-204ENST00000458188 TRPM2O94759 1503 aa12.59□□□□□ -0.39
CLTCL1-204ENST00000458188 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
CLTCL1-204ENST00000458188 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
CLTCL1-204ENST00000458188 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
CLTCL1-204ENST00000458188 TOM1O60784 492 aa12.58□□□□□ -0.4
CLTCL1-204ENST00000458188 HSPA1LP34931 641 aa12.58□□□□□ -0.4
CLTCL1-204ENST00000458188 MED1Q15648 1581 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms