RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
LSS-205ENST00000457828 CNTLNQ9NXG0 1405 aa21.29■■□□□ 1
LSS-205ENST00000457828 MIA2Q96PC5 1412 aa21.26■□□□□ 0.99
LSS-205ENST00000457828 C9orf84Q5VXU9 1444 aa21.26■□□□□ 0.99
LSS-205ENST00000457828 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
LSS-205ENST00000457828 PLEKHH2Q8IVE3 1493 aa21.24■□□□□ 0.99
LSS-205ENST00000457828 PCF11O94913 1555 aaKnown RBP21.24■□□□□ 0.99
LSS-205ENST00000457828 EXOC6Q8TAG9 804 aa21.23■□□□□ 0.99
LSS-205ENST00000457828 NBPF8Q3BBV2 869 aa21.22■□□□□ 0.99
LSS-205ENST00000457828 ST20-MTHFSA0A0A6YYL1 179 aa21.21■□□□□ 0.99
LSS-205ENST00000457828 HFM1A2PYH4 1435 aa21.21■□□□□ 0.99
LSS-205ENST00000457828 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
LSS-205ENST00000457828 ADAMTS12P58397 1594 aa21.21■□□□□ 0.99
LSS-205ENST00000457828 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
LSS-205ENST00000457828 HDGFL2Q7Z4V5 671 aaPredicted RBP21.2■□□□□ 0.98
LSS-205ENST00000457828 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
LSS-205ENST00000457828 UPF2Q9HAU5 1272 aaKnown RBP21.19■□□□□ 0.98
LSS-205ENST00000457828 USP47Q96K76 1375 aa21.19■□□□□ 0.98
LSS-205ENST00000457828 PLIN1O60240 522 aa21.18■□□□□ 0.98
LSS-205ENST00000457828 AKNAQ7Z591 1439 aa21.18■□□□□ 0.98
LSS-205ENST00000457828 U2SURPO15042 1029 aaKnown RBP21.18■□□□□ 0.98
LSS-205ENST00000457828 RALBP1Q15311 655 aa21.16■□□□□ 0.98
LSS-205ENST00000457828 MORC1Q86VD1 984 aa21.16■□□□□ 0.98
LSS-205ENST00000457828 NAIPQ13075 1403 aa21.15■□□□□ 0.98
LSS-205ENST00000457828 NGDNQ8NEJ9 315 aaKnown RBP21.15■□□□□ 0.98
LSS-205ENST00000457828 KTN1Q86UP2 1357 aaKnown RBP21.15■□□□□ 0.98
LSS-205ENST00000457828 PDE4AP27815 886 aa21.14■□□□□ 0.98
LSS-205ENST00000457828 ATP10BO94823 1461 aa21.14■□□□□ 0.97
LSS-205ENST00000457828 EIF3AQ14152 1382 aaKnown RBP21.14■□□□□ 0.97
LSS-205ENST00000457828 RRP1P56182 461 aaKnown RBP21.13■□□□□ 0.97
LSS-205ENST00000457828 ASXL2Q76L83 1435 aa21.13■□□□□ 0.97
LSS-205ENST00000457828 ADGRL1O94910 1474 aa21.13■□□□□ 0.97
LSS-205ENST00000457828 NUP160Q12769 1436 aa21.13■□□□□ 0.97
LSS-205ENST00000457828 NLRP13Q86W25 1043 aa21.12■□□□□ 0.97
LSS-205ENST00000457828 DAPK1P53355 1430 aa21.12■□□□□ 0.97
LSS-205ENST00000457828 MINK1Q8N4C8 1332 aaPredicted RBP21.11■□□□□ 0.97
LSS-205ENST00000457828 SUPT6HQ7KZ85 1726 aaKnown RBP21.11■□□□□ 0.97
LSS-205ENST00000457828 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
LSS-205ENST00000457828 TXNDC2Q86VQ3 553 aa21.1■□□□□ 0.97
LSS-205ENST00000457828 MYBBP1AQ9BQG0 1328 aaKnown RBP21.09■□□□□ 0.97
LSS-205ENST00000457828 SLC4A3P48751 1232 aa21.09■□□□□ 0.97
LSS-205ENST00000457828 MAPK8IP3Q9UPT6 1336 aa21.08■□□□□ 0.97
LSS-205ENST00000457828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.08■□□□□ 0.965e-8■□□□□ 8.8
LSS-205ENST00000457828 MAP3K1Q13233 1512 aa21.07■□□□□ 0.96
LSS-205ENST00000457828 TMEM132EQ6IEE7 984 aa21.07■□□□□ 0.96
LSS-205ENST00000457828 TERF2IPQ9NYB0 399 aa21.07■□□□□ 0.96
LSS-205ENST00000457828 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.07■□□□□ 0.96
LSS-205ENST00000457828 FANCAO15360 1455 aa21.07■□□□□ 0.96
LSS-205ENST00000457828 FRAT1Q92837 279 aaPredicted RBP21.05■□□□□ 0.96
LSS-205ENST00000457828 POGZQ7Z3K3 1410 aa21.05■□□□□ 0.96
LSS-205ENST00000457828 NUP153P49790 1475 aaKnown RBP21.05■□□□□ 0.96
LSS-205ENST00000457828 CCDC141Q6ZP82 1450 aa21.05■□□□□ 0.96
LSS-205ENST00000457828 KIF14Q15058 1648 aa21.04■□□□□ 0.96
LSS-205ENST00000457828 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
LSS-205ENST00000457828 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
LSS-205ENST00000457828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.03■□□□□ 0.966e-8■□□□□ 9.7
LSS-205ENST00000457828 THEMISQ8N1K5 641 aaPredicted RBP21.02■□□□□ 0.96
LSS-205ENST00000457828 BECN1Q14457 450 aa21.02■□□□□ 0.96
LSS-205ENST00000457828 CAMSAP2Q08AD1 1489 aa21.02■□□□□ 0.96
LSS-205ENST00000457828 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
LSS-205ENST00000457828 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
LSS-205ENST00000457828 PDE3BQ13370 1112 aa21.01■□□□□ 0.95
LSS-205ENST00000457828 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
LSS-205ENST00000457828 SLC52A1Q9NWF4 448 aa21.01■□□□□ 0.95
LSS-205ENST00000457828 CFAP70Q5T0N1 1121 aa21.01■□□□□ 0.95
LSS-205ENST00000457828 HSP90AA1P07900 732 aaKnown RBP21■□□□□ 0.95
LSS-205ENST00000457828 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
LSS-205ENST00000457828 CEBPAP49715 358 aaPredicted RBP21■□□□□ 0.95
LSS-205ENST00000457828 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
LSS-205ENST00000457828 CSB-PGBD3P0DP91 1061 aa20.99■□□□□ 0.95
LSS-205ENST00000457828 RAPGEF6Q8TEU7 1601 aa20.99■□□□□ 0.95
LSS-205ENST00000457828 ABCC5O15440 1437 aa20.99■□□□□ 0.95
LSS-205ENST00000457828 CDCA7LQ96GN5 454 aa20.98■□□□□ 0.95
LSS-205ENST00000457828 KIAA0556O60303 1618 aa20.98■□□□□ 0.95
LSS-205ENST00000457828 PNISRQ8TF01 805 aaKnown RBP20.98■□□□□ 0.95
LSS-205ENST00000457828 PANK3Q9H999 370 aa20.97■□□□□ 0.95
LSS-205ENST00000457828 EVC2Q86UK5 1308 aa20.96■□□□□ 0.95
LSS-205ENST00000457828 SLC26A8Q96RN1 970 aa20.96■□□□□ 0.95
LSS-205ENST00000457828 GPATCH8Q9UKJ3 1502 aaKnown RBP20.95■□□□□ 0.94
LSS-205ENST00000457828 STAC3Q96MF2 364 aa20.95■□□□□ 0.94
LSS-205ENST00000457828 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
LSS-205ENST00000457828 WDR7Q9Y4E6 1490 aa20.95■□□□□ 0.94
LSS-205ENST00000457828 DISP1Q96F81 1524 aa20.94■□□□□ 0.94
LSS-205ENST00000457828 CCDC146Q8IYE0 955 aa20.94■□□□□ 0.94
LSS-205ENST00000457828 FBXO31Q5XUX0 539 aaPredicted RBP20.93■□□□□ 0.94
LSS-205ENST00000457828 PLCH2O75038 1416 aa20.93■□□□□ 0.94
LSS-205ENST00000457828 SMG6Q86US8 1419 aaKnown RBP20.93■□□□□ 0.94
LSS-205ENST00000457828 SLKQ9H2G2 1235 aaPredicted RBP20.92■□□□□ 0.94
LSS-205ENST00000457828 CENPJQ9HC77 1338 aaPredicted RBP20.92■□□□□ 0.94
LSS-205ENST00000457828 CCDC9Q9Y3X0 531 aaKnown RBP20.92■□□□□ 0.94
LSS-205ENST00000457828 U2AF1L5P0DN76 240 aaPredicted RBP20.91■□□□□ 0.94
LSS-205ENST00000457828 U2AF1Q01081 240 aaKnown RBP eCLIP20.91■□□□□ 0.94
LSS-205ENST00000457828 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
LSS-205ENST00000457828 USP35Q9P2H5 1018 aa20.91■□□□□ 0.94
LSS-205ENST00000457828 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
LSS-205ENST00000457828 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
LSS-205ENST00000457828 SPRYD3Q8NCJ5 442 aa20.9■□□□□ 0.94
LSS-205ENST00000457828 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
LSS-205ENST00000457828 CTTNBP2Q8WZ74 1663 aa20.9■□□□□ 0.94
LSS-205ENST00000457828 GOLGA2Q08379 1002 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms