RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 LAMC1P11047 1609 aa4.45□□□□□ -1.7
HMGN1P18-201ENST00000457642 CCDC144AA2RUR9 1427 aa4.45□□□□□ -1.7
HMGN1P18-201ENST00000457642 E9PCH4 1651 aa4.45□□□□□ -1.7
HMGN1P18-201ENST00000457642 INSRP06213 1382 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 PREX2Q70Z35 1606 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 CCDC184Q52MB2 194 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 NLRP13Q86W25 1043 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 JPH4Q96JJ6 628 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 BCL11AQ9H165 835 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 ZMYM4Q5VZL5 1548 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 FAM135AQ9P2D6 1515 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 PTPRGP23470 1445 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 MAST1Q9Y2H9 1570 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 RNF123Q5XPI4 1314 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 WASHC2CQ9Y4E1 1318 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 LRPPRCP42704 1394 aaKnown RBP4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 TCERG1O14776 1098 aaKnown RBP4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 MSH5O43196 834 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 CNGB1Q14028 1251 aaPredicted RBP4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 DCAF11Q8TEB1 546 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 KDM2AQ9Y2K7 1162 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 UNC13BO14795 1591 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 PLXNC1O60486 1568 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 ATP10BO94823 1461 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 TRPM1Q7Z4N2 1603 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 ARHGAP5Q13017 1502 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 ST20-MTHFSA0A0A6YYL1 179 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 RRP1P56182 461 aaKnown RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 TMF1P82094 1093 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 CDCA8Q53HL2 280 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 PRAG1Q86YV5 1406 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 PNISRQ8TF01 805 aaKnown RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 IPO9Q96P70 1041 aaKnown RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 ZBTB47Q9UFB7 747 aaPredicted RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 IQGAP3Q86VI3 1631 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 COL17A1Q9UMD9 1497 aaPredicted RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 DUOX2Q9NRD8 1548 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 GPRASP1Q5JY77 1395 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 PARD3Q8TEW0 1356 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 MYO5CQ9NQX4 1742 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 SAMD9LQ8IVG5 1584 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 ERBINQ96RT1 1412 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 MS4A1P11836 297 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 DDRGK1Q96HY6 314 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 RCAN3Q9UKA8 241 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 SYCP2Q9BX26 1530 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 EIF3AQ14152 1382 aaKnown RBP4.4□□□□□ -1.7
HMGN1P18-201ENST00000457642 SLC24A1O60721 1099 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 HNRNPMP52272 730 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 STAC3Q96MF2 364 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 DNAJC5BQ9UF47 199 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 CDC42BPBQ9Y5S2 1711 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 BLMP54132 1417 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 ATP10AO60312 1499 aa4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 PPM1GO15355 546 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 DEKP35659 375 aaKnown RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 WDR43Q15061 677 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 DAXXQ9UER7 740 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 RNF17Q9BXT8 1623 aaKnown RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 A2MP01023 1474 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 MAGI2Q86UL8 1455 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 ABCC2Q92887 1545 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 KNSTRNQ9Y448 316 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 SYNMO15061 1565 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 TTC37Q6PGP7 1564 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 SHROOM2Q13796 1616 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 KANK1Q14678 1352 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 SCAPERQ9BY12 1400 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 NBR1Q14596 966 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 RGL3Q3MIN7 710 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 EFCAB2Q5VUJ9 269 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 NPM2Q86SE8 214 aaKnown RBP4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 NGEFQ8N5V2 710 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 EXOC6Q8TAG9 804 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 USP35Q9P2H5 1018 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CHD1O14646 1710 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 SPHKAPQ2M3C7 1700 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 PDE4AP27815 886 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CC2D1BQ5T0F9 858 aaKnown RBP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CENPQQ7L2Z9 268 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 PANK3Q9H999 370 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 DISP3Q9P2K9 1392 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 NINLQ9Y2I6 1382 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 RTEL1-TNFRSF6BF6WH68 1400 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 SCAF11Q99590 1463 aaKnown RBP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 TRPM2O94759 1503 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 ABCC1P33527 1531 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CLASP1Q7Z460 1538 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 ARAP3Q8WWN8 1544 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 MADDQ8WXG6 1647 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 KDM5AP29375 1690 aaKnown RBP4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 IQGAP1P46940 1657 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 CEP152O94986 1710 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 KIAA1210Q9ULL0 1709 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 BACH2Q9BYV9 841 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 SALL2Q9Y467 1007 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms