RNA–Protein interactions for RNA: ENST00000456580.6

CAPN5-202, Transcript of calpain 5, humanhuman

TSL 2 BASIC

Gene CAPN5, Length 2,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-202ENST00000456580 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
CAPN5-202ENST00000456580 RNF123Q5XPI4 1314 aa20.46■□□□□ 0.87
CAPN5-202ENST00000456580 EXOC6Q8TAG9 804 aa20.46■□□□□ 0.87
CAPN5-202ENST00000456580 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
CAPN5-202ENST00000456580 ABCA8O94911 1581 aa20.43■□□□□ 0.86
CAPN5-202ENST00000456580 PLIN1O60240 522 aa20.42■□□□□ 0.86
CAPN5-202ENST00000456580 NUP160Q12769 1436 aa20.42■□□□□ 0.86
CAPN5-202ENST00000456580 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
CAPN5-202ENST00000456580 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
CAPN5-202ENST00000456580 DISP3Q9P2K9 1392 aa20.38■□□□□ 0.85
CAPN5-202ENST00000456580 NOP58Q9Y2X3 529 aaKnown RBP20.37■□□□□ 0.85
CAPN5-202ENST00000456580 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
CAPN5-202ENST00000456580 ARID4BQ4LE39 1312 aaPredicted RBP20.36■□□□□ 0.85
CAPN5-202ENST00000456580 PER1O15534 1290 aaPredicted RBP20.36■□□□□ 0.85
CAPN5-202ENST00000456580 FAM135AQ9P2D6 1515 aa20.36■□□□□ 0.85
CAPN5-202ENST00000456580 PLA2R1Q13018 1463 aa20.36■□□□□ 0.85
CAPN5-202ENST00000456580 RRP1P56182 461 aaKnown RBP20.35■□□□□ 0.85
CAPN5-202ENST00000456580 SAMD9LQ8IVG5 1584 aa20.35■□□□□ 0.85
CAPN5-202ENST00000456580 KDM5DQ9BY66 1539 aa20.35■□□□□ 0.85
CAPN5-202ENST00000456580 PTPRGP23470 1445 aa20.34■□□□□ 0.85
CAPN5-202ENST00000456580 PANK3Q9H999 370 aa20.33■□□□□ 0.85
CAPN5-202ENST00000456580 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
CAPN5-202ENST00000456580 BRD4O60885 1362 aaPredicted RBP20.33■□□□□ 0.85
CAPN5-202ENST00000456580 PRAG1Q86YV5 1406 aa20.33■□□□□ 0.84
CAPN5-202ENST00000456580 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.84
CAPN5-202ENST00000456580 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
CAPN5-202ENST00000456580 RALBP1Q15311 655 aa20.32■□□□□ 0.84
CAPN5-202ENST00000456580 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
CAPN5-202ENST00000456580 CCDC144AA2RUR9 1427 aa20.32■□□□□ 0.84
CAPN5-202ENST00000456580 TESK2Q96S53 571 aa20.31■□□□□ 0.84
CAPN5-202ENST00000456580 SYCP2Q9BX26 1530 aa20.31■□□□□ 0.84
CAPN5-202ENST00000456580 A2MP01023 1474 aa20.3■□□□□ 0.84
CAPN5-202ENST00000456580 DEKP35659 375 aaKnown RBP20.3■□□□□ 0.84
CAPN5-202ENST00000456580 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
CAPN5-202ENST00000456580 E9PCH4 1651 aa20.29■□□□□ 0.84
CAPN5-202ENST00000456580 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
CAPN5-202ENST00000456580 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
CAPN5-202ENST00000456580 CCDC141Q6ZP82 1450 aa20.28■□□□□ 0.84
CAPN5-202ENST00000456580 PARD3Q8TEW0 1356 aa20.28■□□□□ 0.84
CAPN5-202ENST00000456580 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
CAPN5-202ENST00000456580 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
CAPN5-202ENST00000456580 TTC37Q6PGP7 1564 aa20.25■□□□□ 0.83
CAPN5-202ENST00000456580 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
CAPN5-202ENST00000456580 ERCC6L2Q5T890 1561 aa20.23■□□□□ 0.83
CAPN5-202ENST00000456580 ARHGAP5Q13017 1502 aa20.23■□□□□ 0.83
CAPN5-202ENST00000456580 ANP32AP39687 249 aaKnown RBP20.22■□□□□ 0.83
CAPN5-202ENST00000456580 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
CAPN5-202ENST00000456580 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
CAPN5-202ENST00000456580 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
CAPN5-202ENST00000456580 PREX2Q70Z35 1606 aa20.19■□□□□ 0.82
CAPN5-202ENST00000456580 ERBINQ96RT1 1412 aa20.18■□□□□ 0.82
CAPN5-202ENST00000456580 ZBTB47Q9UFB7 747 aaPredicted RBP20.18■□□□□ 0.82
CAPN5-202ENST00000456580 COL17A1Q9UMD9 1497 aaPredicted RBP20.18■□□□□ 0.82
CAPN5-202ENST00000456580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.18■□□□□ 0.82
CAPN5-202ENST00000456580 LAS1LQ9Y4W2 734 aaKnown RBP20.17■□□□□ 0.82
CAPN5-202ENST00000456580 PDE4AP27815 886 aa20.17■□□□□ 0.82
CAPN5-202ENST00000456580 MYO5CQ9NQX4 1742 aa20.16■□□□□ 0.82
CAPN5-202ENST00000456580 GPRASP1Q5JY77 1395 aa20.14■□□□□ 0.81
CAPN5-202ENST00000456580 MAGI2Q86UL8 1455 aa20.13■□□□□ 0.81
CAPN5-202ENST00000456580 TMF1P82094 1093 aa20.13■□□□□ 0.81
CAPN5-202ENST00000456580 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
CAPN5-202ENST00000456580 AFAP1Q8N556 730 aa20.13■□□□□ 0.81
CAPN5-202ENST00000456580 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
CAPN5-202ENST00000456580 PLEKHH1Q9ULM0 1364 aa20.11■□□□□ 0.81
CAPN5-202ENST00000456580 BACH2Q9BYV9 841 aa20.09■□□□□ 0.81
CAPN5-202ENST00000456580 TRAPPC8Q9Y2L5 1435 aa20.09■□□□□ 0.81
CAPN5-202ENST00000456580 UNC13BO14795 1591 aa20.09■□□□□ 0.81
CAPN5-202ENST00000456580 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
CAPN5-202ENST00000456580 SLC4A3P48751 1232 aa20.08■□□□□ 0.8
CAPN5-202ENST00000456580 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.8
CAPN5-202ENST00000456580 SPINK5Q9NQ38 1064 aaPredicted RBP20.07■□□□□ 0.8
CAPN5-202ENST00000456580 BLMP54132 1417 aaPredicted RBP20.07■□□□□ 0.8
CAPN5-202ENST00000456580 CHD1O14646 1710 aa20.07■□□□□ 0.8
CAPN5-202ENST00000456580 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
CAPN5-202ENST00000456580 TCERG1O14776 1098 aaKnown RBP20.05■□□□□ 0.8
CAPN5-202ENST00000456580 WDR7Q9Y4E6 1490 aa20.05■□□□□ 0.8
CAPN5-202ENST00000456580 AMER1Q5JTC6 1135 aaPredicted RBP20.04■□□□□ 0.8
CAPN5-202ENST00000456580 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
CAPN5-202ENST00000456580 IQGAP3Q86VI3 1631 aa20.04■□□□□ 0.8
CAPN5-202ENST00000456580 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
CAPN5-202ENST00000456580 DUSP27Q5VZP5 1158 aa20.02■□□□□ 0.8
CAPN5-202ENST00000456580 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
CAPN5-202ENST00000456580 MYT1LQ9UL68 1186 aa19.99■□□□□ 0.79
CAPN5-202ENST00000456580 MAST1Q9Y2H9 1570 aa19.99■□□□□ 0.79
CAPN5-202ENST00000456580 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
CAPN5-202ENST00000456580 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
CAPN5-202ENST00000456580 ZMYM4Q5VZL5 1548 aa19.98■□□□□ 0.79
CAPN5-202ENST00000456580 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
CAPN5-202ENST00000456580 APAF1O14727 1248 aa19.97■□□□□ 0.79
CAPN5-202ENST00000456580 BCAR3O75815 825 aa19.97■□□□□ 0.79
CAPN5-202ENST00000456580 RTL5Q5HYW3 569 aaPredicted RBP19.97■□□□□ 0.79
CAPN5-202ENST00000456580 EFCAB2Q5VUJ9 269 aa19.97■□□□□ 0.79
CAPN5-202ENST00000456580 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
CAPN5-202ENST00000456580 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
CAPN5-202ENST00000456580 NEFMP07197 916 aa19.95■□□□□ 0.78
CAPN5-202ENST00000456580 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
CAPN5-202ENST00000456580 SPAG9O60271 1321 aaKnown RBP19.95■□□□□ 0.78
CAPN5-202ENST00000456580 RGS3P49796 1198 aa19.95■□□□□ 0.78
CAPN5-202ENST00000456580 TNNT2P45379 298 aaPredicted RBP19.94■□□□□ 0.78
CAPN5-202ENST00000456580 ATP10AO60312 1499 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms