RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 TMC1Q8TDI8 760 aa25.27■■□□□ 1.64
SEMA3B-208ENST00000456210 USP35Q9P2H5 1018 aa25.27■■□□□ 1.64
SEMA3B-208ENST00000456210 ADGRL2O95490 1459 aa25.26■■□□□ 1.63
SEMA3B-208ENST00000456210 ARHGEF12Q9NZN5 1544 aa25.24■■□□□ 1.63
SEMA3B-208ENST00000456210 PLEKHD1A6NEE1 506 aa25.24■■□□□ 1.63
SEMA3B-208ENST00000456210 MS4A1P11836 297 aa25.23■■□□□ 1.63
SEMA3B-208ENST00000456210 MYBBP1AQ9BQG0 1328 aaKnown RBP25.21■■□□□ 1.63
SEMA3B-208ENST00000456210 PRKCSHP14314 528 aaPredicted RBP25.21■■□□□ 1.63
SEMA3B-208ENST00000456210 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
SEMA3B-208ENST00000456210 GPATCH8Q9UKJ3 1502 aaKnown RBP25.2■■□□□ 1.63
SEMA3B-208ENST00000456210 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.63
SEMA3B-208ENST00000456210 ZNF644Q9H582 1327 aaPredicted RBP25.19■■□□□ 1.62
SEMA3B-208ENST00000456210 RALBP1Q15311 655 aa25.19■■□□□ 1.62
SEMA3B-208ENST00000456210 CFDP1Q9UEE9 299 aaPredicted RBP25.19■■□□□ 1.62
SEMA3B-208ENST00000456210 PDE4AP27815 886 aa25.18■■□□□ 1.62
SEMA3B-208ENST00000456210 BACH2Q9BYV9 841 aa25.18■■□□□ 1.62
SEMA3B-208ENST00000456210 EXOC6Q8TAG9 804 aa25.17■■□□□ 1.62
SEMA3B-208ENST00000456210 POLR3GLQ9BT43 218 aa25.17■■□□□ 1.62
SEMA3B-208ENST00000456210 RCAN3Q9UKA8 241 aa25.16■■□□□ 1.62
SEMA3B-208ENST00000456210 PDE3BQ13370 1112 aa25.15■■□□□ 1.62
SEMA3B-208ENST00000456210 CNGB1Q14028 1251 aaPredicted RBP25.14■■□□□ 1.62
SEMA3B-208ENST00000456210 WASHC2CQ9Y4E1 1318 aa25.13■■□□□ 1.61
SEMA3B-208ENST00000456210 ABCC10Q5T3U5 1492 aa25.13■■□□□ 1.61
SEMA3B-208ENST00000456210 PPM1GO15355 546 aaPredicted RBP25.13■■□□□ 1.61
SEMA3B-208ENST00000456210 ASXL2Q76L83 1435 aa25.12■■□□□ 1.61
SEMA3B-208ENST00000456210 CDC42BPAQ5VT25 1732 aa25.12■■□□□ 1.61
SEMA3B-208ENST00000456210 NEFMP07197 916 aa25.11■■□□□ 1.61
SEMA3B-208ENST00000456210 ZMYM4Q5VZL5 1548 aa25.11■■□□□ 1.61
SEMA3B-208ENST00000456210 NPM2Q86SE8 214 aaKnown RBP25.1■■□□□ 1.61
SEMA3B-208ENST00000456210 KDM5DQ9BY66 1539 aa25.1■■□□□ 1.61
SEMA3B-208ENST00000456210 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
SEMA3B-208ENST00000456210 IL27Q8NEV9 243 aa25.09■■□□□ 1.61
SEMA3B-208ENST00000456210 PKD2Q13563 968 aa25.09■■□□□ 1.61
SEMA3B-208ENST00000456210 INSRP06213 1382 aa25.09■■□□□ 1.61
SEMA3B-208ENST00000456210 ANO8Q9HCE9 1232 aaPredicted RBP25.08■■□□□ 1.61
SEMA3B-208ENST00000456210 SENP3-EIF4A1A0A087X0R7 540 aa25.07■■□□□ 1.6
SEMA3B-208ENST00000456210 PARD3Q8TEW0 1356 aa25.07■■□□□ 1.6
SEMA3B-208ENST00000456210 CARD11Q9BXL7 1154 aa25.07■■□□□ 1.6
SEMA3B-208ENST00000456210 ZNF777Q9ULD5 760 aaPredicted RBP25.06■■□□□ 1.6
SEMA3B-208ENST00000456210 ANKRD30AQ9BXX3 1397 aa25.05■■□□□ 1.6
SEMA3B-208ENST00000456210 LAS1LQ9Y4W2 734 aaKnown RBP25.05■■□□□ 1.6
SEMA3B-208ENST00000456210 NLRP13Q86W25 1043 aa25.04■■□□□ 1.6
SEMA3B-208ENST00000456210 WDR7Q9Y4E6 1490 aa25.03■■□□□ 1.6
SEMA3B-208ENST00000456210 ANKRD50Q9ULJ7 1429 aa25.03■■□□□ 1.6
SEMA3B-208ENST00000456210 DDRGK1Q96HY6 314 aa25.03■■□□□ 1.6
SEMA3B-208ENST00000456210 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
SEMA3B-208ENST00000456210 SALL2Q9Y467 1007 aaPredicted RBP25.01■■□□□ 1.59
SEMA3B-208ENST00000456210 ST20-MTHFSA0A0A6YYL1 179 aa25■■□□□ 1.59
SEMA3B-208ENST00000456210 BLMP54132 1417 aaPredicted RBP25■■□□□ 1.59
SEMA3B-208ENST00000456210 PLEKHH2Q8IVE3 1493 aa24.98■■□□□ 1.59
SEMA3B-208ENST00000456210 TRPM1Q7Z4N2 1603 aa24.98■■□□□ 1.59
SEMA3B-208ENST00000456210 PREX2Q70Z35 1606 aa24.96■■□□□ 1.59
SEMA3B-208ENST00000456210 LAMC1P11047 1609 aa24.93■■□□□ 1.58
SEMA3B-208ENST00000456210 FAM69CQ0P6D2 419 aa24.93■■□□□ 1.58
SEMA3B-208ENST00000456210 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
SEMA3B-208ENST00000456210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.58
SEMA3B-208ENST00000456210 CDC42BPBQ9Y5S2 1711 aa24.92■■□□□ 1.58
SEMA3B-208ENST00000456210 ARHGEF5Q12774 1597 aa24.91■■□□□ 1.58
SEMA3B-208ENST00000456210 NUP155O75694 1391 aa24.91■■□□□ 1.58
SEMA3B-208ENST00000456210 TRHP20396 242 aaPredicted RBP24.9■■□□□ 1.58
SEMA3B-208ENST00000456210 CDCA7LQ96GN5 454 aa24.89■■□□□ 1.58
SEMA3B-208ENST00000456210 DIP2BQ9P265 1576 aa24.89■■□□□ 1.57
SEMA3B-208ENST00000456210 KIF13AQ9H1H9 1805 aa24.89■■□□□ 1.57
SEMA3B-208ENST00000456210 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
SEMA3B-208ENST00000456210 PER1O15534 1290 aaPredicted RBP24.88■■□□□ 1.57
SEMA3B-208ENST00000456210 SAMD9LQ8IVG5 1584 aa24.88■■□□□ 1.57
SEMA3B-208ENST00000456210 COL17A1Q9UMD9 1497 aaPredicted RBP24.87■■□□□ 1.57
SEMA3B-208ENST00000456210 CRBNQ96SW2 442 aa24.87■■□□□ 1.57
SEMA3B-208ENST00000456210 GSE1Q14687 1217 aa24.87■■□□□ 1.57
SEMA3B-208ENST00000456210 RTN4Q9NQC3 1192 aaKnown RBP24.87■■□□□ 1.57
SEMA3B-208ENST00000456210 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
SEMA3B-208ENST00000456210 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
SEMA3B-208ENST00000456210 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
SEMA3B-208ENST00000456210 KDM2BQ8NHM5 1336 aa24.86■■□□□ 1.57
SEMA3B-208ENST00000456210 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
SEMA3B-208ENST00000456210 MYO5CQ9NQX4 1742 aa24.85■■□□□ 1.57
SEMA3B-208ENST00000456210 GPRASP1Q5JY77 1395 aa24.84■■□□□ 1.57
SEMA3B-208ENST00000456210 ARHGAP5Q13017 1502 aa24.83■■□□□ 1.57
SEMA3B-208ENST00000456210 DCAF11Q8TEB1 546 aa24.83■■□□□ 1.57
SEMA3B-208ENST00000456210 CCDC141Q6ZP82 1450 aa24.83■■□□□ 1.56
SEMA3B-208ENST00000456210 PLIN1O60240 522 aa24.82■■□□□ 1.56
SEMA3B-208ENST00000456210 NFKBIBQ15653 356 aa24.82■■□□□ 1.56
SEMA3B-208ENST00000456210 RSPH4AQ5TD94 716 aa24.82■■□□□ 1.56
SEMA3B-208ENST00000456210 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
SEMA3B-208ENST00000456210 HNRNPMP52272 730 aaKnown RBP eCLIP24.82■■□□□ 1.56
SEMA3B-208ENST00000456210 KDM2AQ9Y2K7 1162 aa24.82■■□□□ 1.56
SEMA3B-208ENST00000456210 ABCA9Q8IUA7 1624 aa24.81■■□□□ 1.56
SEMA3B-208ENST00000456210 CD109Q6YHK3 1445 aa24.78■■□□□ 1.56
SEMA3B-208ENST00000456210 CENPQQ7L2Z9 268 aaPredicted RBP24.77■■□□□ 1.56
SEMA3B-208ENST00000456210 FAM135AQ9P2D6 1515 aa24.77■■□□□ 1.56
SEMA3B-208ENST00000456210 SYCP2Q9BX26 1530 aa24.76■■□□□ 1.55
SEMA3B-208ENST00000456210 EIF2AK4Q9P2K8 1649 aaKnown RBP24.75■■□□□ 1.55
SEMA3B-208ENST00000456210 MAP3K4Q9Y6R4 1608 aa24.75■■□□□ 1.55
SEMA3B-208ENST00000456210 SKAP1Q86WV1 359 aa24.75■■□□□ 1.55
SEMA3B-208ENST00000456210 BRPF3Q9ULD4 1205 aa24.74■■□□□ 1.55
SEMA3B-208ENST00000456210 VIRMAQ69YN4 1812 aaKnown RBP24.74■■□□□ 1.55
SEMA3B-208ENST00000456210 GLI2P10070 1586 aa24.74■■□□□ 1.55
SEMA3B-208ENST00000456210 FAM161AQ3B820 660 aa24.73■■□□□ 1.55
SEMA3B-208ENST00000456210 PLCH2O75038 1416 aa24.72■■□□□ 1.55
SEMA3B-208ENST00000456210 MAST1Q9Y2H9 1570 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms