RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ST20-MTHFSA0A0A6YYL1 179 aa18.86■□□□□ 0.61
CLK3-203ENST00000454830 KANK1Q14678 1352 aa18.86■□□□□ 0.61
CLK3-203ENST00000454830 CD109Q6YHK3 1445 aa18.86■□□□□ 0.61
CLK3-203ENST00000454830 GGT6Q6P531 493 aa18.86■□□□□ 0.61
CLK3-203ENST00000454830 CHGAP10645 457 aaKnown RBP18.85■□□□□ 0.61
CLK3-203ENST00000454830 ERBINQ96RT1 1412 aa18.84■□□□□ 0.61
CLK3-203ENST00000454830 MAST1Q9Y2H9 1570 aa18.84■□□□□ 0.61
CLK3-203ENST00000454830 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
CLK3-203ENST00000454830 NBPF1Q3BBV0 1214 aa18.83■□□□□ 0.6
CLK3-203ENST00000454830 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
CLK3-203ENST00000454830 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
CLK3-203ENST00000454830 RAPGEF3O95398 923 aa18.82■□□□□ 0.6
CLK3-203ENST00000454830 CNTLNQ9NXG0 1405 aa18.81■□□□□ 0.6
CLK3-203ENST00000454830 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
CLK3-203ENST00000454830 MRS2Q9HD23 443 aa18.81■□□□□ 0.6
CLK3-203ENST00000454830 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
CLK3-203ENST00000454830 ATP7AQ04656 1500 aa18.77■□□□□ 0.6
CLK3-203ENST00000454830 PLA2R1Q13018 1463 aa18.77■□□□□ 0.59
CLK3-203ENST00000454830 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.59
CLK3-203ENST00000454830 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
CLK3-203ENST00000454830 SPATA31E1Q6ZUB1 1445 aa18.76■□□□□ 0.59
CLK3-203ENST00000454830 ZFYVE16Q7Z3T8 1539 aa18.76■□□□□ 0.59
CLK3-203ENST00000454830 UNC13BO14795 1591 aa18.75■□□□□ 0.59
CLK3-203ENST00000454830 ARAP3Q8WWN8 1544 aa18.75■□□□□ 0.59
CLK3-203ENST00000454830 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
CLK3-203ENST00000454830 CCDC184Q52MB2 194 aa18.74■□□□□ 0.59
CLK3-203ENST00000454830 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
CLK3-203ENST00000454830 RALGAPBQ86X10 1494 aa18.73■□□□□ 0.59
CLK3-203ENST00000454830 UHRF1BP1Q6BDS2 1440 aa18.72■□□□□ 0.59
CLK3-203ENST00000454830 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
CLK3-203ENST00000454830 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
CLK3-203ENST00000454830 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.58
CLK3-203ENST00000454830 WASHC2CQ9Y4E1 1318 aa18.7■□□□□ 0.58
CLK3-203ENST00000454830 A2MP01023 1474 aa18.7■□□□□ 0.58
CLK3-203ENST00000454830 BCANQ96GW7 911 aa18.69■□□□□ 0.58
CLK3-203ENST00000454830 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
CLK3-203ENST00000454830 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
CLK3-203ENST00000454830 NEFLP07196 543 aa18.69■□□□□ 0.58
CLK3-203ENST00000454830 MAGI2Q86UL8 1455 aa18.64■□□□□ 0.57
CLK3-203ENST00000454830 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
CLK3-203ENST00000454830 KDM5CP41229 1560 aa18.63■□□□□ 0.57
CLK3-203ENST00000454830 FKBP8Q14318 412 aa18.63■□□□□ 0.57
CLK3-203ENST00000454830 POGZQ7Z3K3 1410 aa18.63■□□□□ 0.57
CLK3-203ENST00000454830 TMF1P82094 1093 aa18.62■□□□□ 0.57
CLK3-203ENST00000454830 ATP10AO60312 1499 aa18.62■□□□□ 0.57
CLK3-203ENST00000454830 INO80Q9ULG1 1556 aaPredicted RBP18.62■□□□□ 0.57
CLK3-203ENST00000454830 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
CLK3-203ENST00000454830 BCORL1Q5H9F3 1711 aa18.61■□□□□ 0.57
CLK3-203ENST00000454830 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
CLK3-203ENST00000454830 SUPT16HQ9Y5B9 1047 aaKnown RBP18.61■□□□□ 0.57
CLK3-203ENST00000454830 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
CLK3-203ENST00000454830 E9PCH4 1651 aa18.59■□□□□ 0.57
CLK3-203ENST00000454830 CFAP70Q5T0N1 1121 aa18.59■□□□□ 0.57
CLK3-203ENST00000454830 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.57
CLK3-203ENST00000454830 MLECQ14165 292 aa18.58■□□□□ 0.56
CLK3-203ENST00000454830 KIDINS220Q9ULH0 1771 aa18.56■□□□□ 0.56
CLK3-203ENST00000454830 UGGT1Q9NYU2 1555 aa18.56■□□□□ 0.56
CLK3-203ENST00000454830 PANK3Q9H999 370 aa18.54■□□□□ 0.56
CLK3-203ENST00000454830 ADGRF5Q8IZF2 1346 aa18.54■□□□□ 0.56
CLK3-203ENST00000454830 CFAP74Q9C0B2 1584 aa18.54■□□□□ 0.56
CLK3-203ENST00000454830 DISP3Q9P2K9 1392 aa18.53■□□□□ 0.56
CLK3-203ENST00000454830 TRPM2O94759 1503 aa18.53■□□□□ 0.56
CLK3-203ENST00000454830 NEO1Q92859 1461 aa18.53■□□□□ 0.56
CLK3-203ENST00000454830 TET3O43151 1660 aa18.53■□□□□ 0.56
CLK3-203ENST00000454830 TESK2Q96S53 571 aa18.52■□□□□ 0.56
CLK3-203ENST00000454830 PTPRTO14522 1441 aa18.52■□□□□ 0.56
CLK3-203ENST00000454830 IRX6P78412 446 aaPredicted RBP18.52■□□□□ 0.56
CLK3-203ENST00000454830 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.56
CLK3-203ENST00000454830 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.56
CLK3-203ENST00000454830 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
CLK3-203ENST00000454830 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
CLK3-203ENST00000454830 CLTCL1P53675 1640 aa18.51■□□□□ 0.55
CLK3-203ENST00000454830 HECW2Q9P2P5 1572 aa18.51■□□□□ 0.55
CLK3-203ENST00000454830 RIMBP3CA6NJZ7 1639 aa18.51■□□□□ 0.55
CLK3-203ENST00000454830 RIMBP3BA6NNM3 1639 aa18.51■□□□□ 0.55
CLK3-203ENST00000454830 RIMBP3Q9UFD9 1639 aa18.51■□□□□ 0.55
CLK3-203ENST00000454830 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
CLK3-203ENST00000454830 GPRASP1Q5JY77 1395 aa18.5■□□□□ 0.55
CLK3-203ENST00000454830 PELP1Q8IZL8 1130 aaKnown RBP18.5■□□□□ 0.55
CLK3-203ENST00000454830 STAC3Q96MF2 364 aa18.5■□□□□ 0.55
CLK3-203ENST00000454830 YEATS2Q9ULM3 1422 aa18.5■□□□□ 0.55
CLK3-203ENST00000454830 TRAK1Q9UPV9 953 aa18.49■□□□□ 0.55
CLK3-203ENST00000454830 KTN1Q86UP2 1357 aaKnown RBP18.49■□□□□ 0.55
CLK3-203ENST00000454830 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
CLK3-203ENST00000454830 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
CLK3-203ENST00000454830 DEPDC5O75140 1603 aa18.48■□□□□ 0.55
CLK3-203ENST00000454830 RALBP1Q15311 655 aa18.47■□□□□ 0.55
CLK3-203ENST00000454830 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
CLK3-203ENST00000454830 CDCA8Q53HL2 280 aa18.47■□□□□ 0.55
CLK3-203ENST00000454830 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
CLK3-203ENST00000454830 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
CLK3-203ENST00000454830 NPATQ14207 1427 aa18.47■□□□□ 0.55
CLK3-203ENST00000454830 POLR1AO95602 1720 aaPredicted RBP18.46■□□□□ 0.55
CLK3-203ENST00000454830 ESF1Q9H501 851 aaKnown RBP18.45■□□□□ 0.54
CLK3-203ENST00000454830 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
CLK3-203ENST00000454830 CEP152O94986 1710 aa18.45■□□□□ 0.54
CLK3-203ENST00000454830 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
CLK3-203ENST00000454830 NOS1P29475 1434 aa18.45■□□□□ 0.54
CLK3-203ENST00000454830 EFCAB6Q5THR3 1501 aa18.45■□□□□ 0.54
CLK3-203ENST00000454830 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms