RNA–Protein interactions for RNA: ENST00000452564.1

PIKFYVE-207, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 2

Gene PIKFYVE, Length 4,214 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-207ENST00000452564 MAP3K1Q13233 1512 aa11.52□□□□□ -0.57
PIKFYVE-207ENST00000452564 NWD1Q149M9 1564 aa11.51□□□□□ -0.57
PIKFYVE-207ENST00000452564 ABCC3O15438 1527 aa11.51□□□□□ -0.57
PIKFYVE-207ENST00000452564 CEP152O94986 1710 aa11.51□□□□□ -0.57
PIKFYVE-207ENST00000452564 NLRP1Q9C000 1473 aa11.5□□□□□ -0.57
PIKFYVE-207ENST00000452564 UGGT1Q9NYU2 1555 aa11.49□□□□□ -0.57
PIKFYVE-207ENST00000452564 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
PIKFYVE-207ENST00000452564 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
PIKFYVE-207ENST00000452564 TET3O43151 1660 aa11.48□□□□□ -0.57
PIKFYVE-207ENST00000452564 SHANK2Q9UPX8 1470 aa11.48□□□□□ -0.57
PIKFYVE-207ENST00000452564 LMTK2Q8IWU2 1503 aa11.47□□□□□ -0.57
PIKFYVE-207ENST00000452564 DHX29Q7Z478 1369 aaKnown RBP11.47□□□□□ -0.57
PIKFYVE-207ENST00000452564 PKD2Q13563 968 aa11.46□□□□□ -0.58
PIKFYVE-207ENST00000452564 CCDC141Q6ZP82 1450 aa11.46□□□□□ -0.58
PIKFYVE-207ENST00000452564 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
PIKFYVE-207ENST00000452564 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
PIKFYVE-207ENST00000452564 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
PIKFYVE-207ENST00000452564 PIK3C2BO00750 1634 aa11.43□□□□□ -0.58
PIKFYVE-207ENST00000452564 ERVK-7P63135 1459 aa11.43□□□□□ -0.58
PIKFYVE-207ENST00000452564 CHIC1Q5VXU3 224 aa11.4□□□□□ -0.58
PIKFYVE-207ENST00000452564 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
PIKFYVE-207ENST00000452564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
PIKFYVE-207ENST00000452564 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
PIKFYVE-207ENST00000452564 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
PIKFYVE-207ENST00000452564 MLECQ14165 292 aa11.39□□□□□ -0.59
PIKFYVE-207ENST00000452564 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
PIKFYVE-207ENST00000452564 DISP3Q9P2K9 1392 aa11.38□□□□□ -0.59
PIKFYVE-207ENST00000452564 MIA2Q96PC5 1412 aa11.38□□□□□ -0.59
PIKFYVE-207ENST00000452564 SPAG9O60271 1321 aaKnown RBP11.37□□□□□ -0.59
PIKFYVE-207ENST00000452564 DUOX2Q9NRD8 1548 aa11.37□□□□□ -0.59
PIKFYVE-207ENST00000452564 LAMC1P11047 1609 aa11.37□□□□□ -0.59
PIKFYVE-207ENST00000452564 TNRQ92752 1358 aa11.36□□□□□ -0.59
PIKFYVE-207ENST00000452564 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
PIKFYVE-207ENST00000452564 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
PIKFYVE-207ENST00000452564 MYO5BQ9ULV0 1848 aa11.34□□□□□ -0.59
PIKFYVE-207ENST00000452564 GCC2Q8IWJ2 1684 aa11.34□□□□□ -0.59
PIKFYVE-207ENST00000452564 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.593e-7■■■■□ 24
PIKFYVE-207ENST00000452564 CCNB3Q8WWL7 1395 aa11.33□□□□□ -0.6
PIKFYVE-207ENST00000452564 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
PIKFYVE-207ENST00000452564 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
PIKFYVE-207ENST00000452564 ERBINQ96RT1 1412 aa11.33□□□□□ -0.6
PIKFYVE-207ENST00000452564 UNC13BO14795 1591 aa11.33□□□□□ -0.6
PIKFYVE-207ENST00000452564 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
PIKFYVE-207ENST00000452564 EFCAB6Q5THR3 1501 aa11.32□□□□□ -0.6
PIKFYVE-207ENST00000452564 COL16A1Q07092 1604 aaPredicted RBP11.32□□□□□ -0.6
PIKFYVE-207ENST00000452564 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
PIKFYVE-207ENST00000452564 ZNF644Q9H582 1327 aaPredicted RBP11.32□□□□□ -0.6
PIKFYVE-207ENST00000452564 ADGRB3O60242 1522 aa11.31□□□□□ -0.6
PIKFYVE-207ENST00000452564 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
PIKFYVE-207ENST00000452564 ADGRL2O95490 1459 aa11.31□□□□□ -0.6
PIKFYVE-207ENST00000452564 NOS1P29475 1434 aa11.3□□□□□ -0.6
PIKFYVE-207ENST00000452564 SCAF11Q99590 1463 aaKnown RBP11.29□□□□□ -0.6
PIKFYVE-207ENST00000452564 NRXN3Q9Y4C0 1643 aa11.29□□□□□ -0.6
PIKFYVE-207ENST00000452564 SETD1AO15047 1707 aaKnown RBP11.28□□□□□ -0.6
PIKFYVE-207ENST00000452564 AHDC1Q5TGY3 1603 aaPredicted RBP11.28□□□□□ -0.6
PIKFYVE-207ENST00000452564 NKTRP30414 1462 aaKnown RBP11.27□□□□□ -0.6
PIKFYVE-207ENST00000452564 IQGAP3Q86VI3 1631 aa11.27□□□□□ -0.6
PIKFYVE-207ENST00000452564 RSPH4AQ5TD94 716 aa11.27□□□□□ -0.61
PIKFYVE-207ENST00000452564 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
PIKFYVE-207ENST00000452564 ZFYVE9O95405 1425 aa11.27□□□□□ -0.61
PIKFYVE-207ENST00000452564 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
PIKFYVE-207ENST00000452564 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
PIKFYVE-207ENST00000452564 NHSL1Q5SYE7 1610 aa11.26□□□□□ -0.61
PIKFYVE-207ENST00000452564 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 MYOM3Q5VTT5 1437 aa11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 E9PCH4 1651 aa11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 HSPA1LP34931 641 aa11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 ABCC5O15440 1437 aa11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 VPS8Q8N3P4 1428 aa11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
PIKFYVE-207ENST00000452564 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
PIKFYVE-207ENST00000452564 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
PIKFYVE-207ENST00000452564 UBTFP17480 764 aaKnown RBP11.22□□□□□ -0.61
PIKFYVE-207ENST00000452564 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
PIKFYVE-207ENST00000452564 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
PIKFYVE-207ENST00000452564 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.21□□□□□ -0.61
PIKFYVE-207ENST00000452564 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
PIKFYVE-207ENST00000452564 PRAG1Q86YV5 1406 aa11.2□□□□□ -0.62
PIKFYVE-207ENST00000452564 DAPK1P53355 1430 aa11.19□□□□□ -0.62
PIKFYVE-207ENST00000452564 SETBP1Q9Y6X0 1596 aa11.18□□□□□ -0.62
PIKFYVE-207ENST00000452564 UBAP1LF5GYI3 381 aa11.18□□□□□ -0.62
PIKFYVE-207ENST00000452564 TMEM2Q9UHN6 1383 aa11.17□□□□□ -0.62
PIKFYVE-207ENST00000452564 CFAP65Q6ZU64 1925 aaKnown RBP11.17□□□□□ -0.62
PIKFYVE-207ENST00000452564 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
PIKFYVE-207ENST00000452564 PLPPR3Q6T4P5 718 aa11.17□□□□□ -0.62
PIKFYVE-207ENST00000452564 LRP6O75581 1613 aa11.15□□□□□ -0.62
PIKFYVE-207ENST00000452564 THEMISQ8N1K5 641 aaPredicted RBP11.15□□□□□ -0.62
PIKFYVE-207ENST00000452564 LTKP29376 864 aa11.14□□□□□ -0.63
PIKFYVE-207ENST00000452564 ANKLE2Q86XL3 938 aa11.14□□□□□ -0.63
PIKFYVE-207ENST00000452564 CDK12Q9NYV4 1490 aaPredicted RBP11.14□□□□□ -0.63
PIKFYVE-207ENST00000452564 NALCNQ8IZF0 1738 aa11.13□□□□□ -0.63
PIKFYVE-207ENST00000452564 MARF1Q9Y4F3 1742 aaKnown RBP11.13□□□□□ -0.63
PIKFYVE-207ENST00000452564 GGT6Q6P531 493 aa11.13□□□□□ -0.63
PIKFYVE-207ENST00000452564 SPHKAPQ2M3C7 1700 aa11.13□□□□□ -0.63
PIKFYVE-207ENST00000452564 TOM1O60784 492 aa11.12□□□□□ -0.63
PIKFYVE-207ENST00000452564 ADAMTS13Q76LX8 1427 aa11.12□□□□□ -0.63
PIKFYVE-207ENST00000452564 ESF1Q9H501 851 aaKnown RBP11.12□□□□□ -0.63
PIKFYVE-207ENST00000452564 KIF3BO15066 747 aa11.11□□□□□ -0.63
PIKFYVE-207ENST00000452564 FGD6Q6ZV73 1430 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms