RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P22-202ENST00000451823 WNT2BQ93097 391 aa8.19□□□□□ -1.1
HMGB3P22-202ENST00000451823 PROX2Q3B8N5 592 aa8.18□□□□□ -1.1
HMGB3P22-202ENST00000451823 FBXW7Q969H0 707 aa8.18□□□□□ -1.1
HMGB3P22-202ENST00000451823 C6orf132Q5T0Z8 1188 aa8.17□□□□□ -1.1
HMGB3P22-202ENST00000451823 DDX12PQ92771 950 aa8.17□□□□□ -1.1
HMGB3P22-202ENST00000451823 PPP1R3GB7ZBB8 358 aa8.16□□□□□ -1.1
HMGB3P22-202ENST00000451823 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
HMGB3P22-202ENST00000451823 EPAS1Q99814 870 aa8.16□□□□□ -1.1
HMGB3P22-202ENST00000451823 THSD4Q6ZMP0 1018 aa8.15□□□□□ -1.1
HMGB3P22-202ENST00000451823 NBPF3Q9H094 633 aa8.15□□□□□ -1.1
HMGB3P22-202ENST00000451823 KIAA1468Q9P260 1216 aa8.15□□□□□ -1.1
HMGB3P22-202ENST00000451823 RABGEF1Q9UJ41 708 aa8.15□□□□□ -1.1
HMGB3P22-202ENST00000451823 WDR70Q9NW82 654 aa8.13□□□□□ -1.11
HMGB3P22-202ENST00000451823 E2F4Q16254 413 aa8.11□□□□□ -1.11
HMGB3P22-202ENST00000451823 ONECUT3O60422 494 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P22-202ENST00000451823 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P22-202ENST00000451823 NBR1Q14596 966 aa8.08□□□□□ -1.12
HMGB3P22-202ENST00000451823 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
HMGB3P22-202ENST00000451823 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
HMGB3P22-202ENST00000451823 BCAMP50895 628 aa8.07□□□□□ -1.12
HMGB3P22-202ENST00000451823 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
HMGB3P22-202ENST00000451823 LAPTM4BQ86VI4 370 aa8.07□□□□□ -1.12
HMGB3P22-202ENST00000451823 ZFRQ96KR1 1074 aaKnown RBP8.07□□□□□ -1.12
HMGB3P22-202ENST00000451823 SEPT9Q9UHD8 586 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P22-202ENST00000451823 TRIM6-TRIM34B2RNG4 842 aa8.06□□□□□ -1.12
HMGB3P22-202ENST00000451823 MAP3K7O43318 606 aa8.06□□□□□ -1.12
HMGB3P22-202ENST00000451823 PDIA6Q15084 440 aa8.06□□□□□ -1.12
HMGB3P22-202ENST00000451823 SOWAHBA6NEL2 793 aa8.04□□□□□ -1.12
HMGB3P22-202ENST00000451823 EN1Q05925 392 aaPredicted RBP8.04□□□□□ -1.12
HMGB3P22-202ENST00000451823 PACS2Q86VP3 889 aa8.04□□□□□ -1.12
HMGB3P22-202ENST00000451823 TSKSQ9UJT2 592 aa8.03□□□□□ -1.12
HMGB3P22-202ENST00000451823 PRIM1P49642 420 aaKnown RBP8.02□□□□□ -1.13
HMGB3P22-202ENST00000451823 IFFO2Q5TF58 517 aa8.02□□□□□ -1.13
HMGB3P22-202ENST00000451823 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
HMGB3P22-202ENST00000451823 FAM98CQ17RN3 349 aaKnown RBP8.01□□□□□ -1.13
HMGB3P22-202ENST00000451823 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P22-202ENST00000451823 SMAPO00193 183 aa8□□□□□ -1.13
HMGB3P22-202ENST00000451823 CDCA7LQ96GN5 454 aa8□□□□□ -1.13
HMGB3P22-202ENST00000451823 OSBPP22059 807 aa7.99□□□□□ -1.13
HMGB3P22-202ENST00000451823 PRSS12P56730 875 aa7.99□□□□□ -1.13
HMGB3P22-202ENST00000451823 TSHZ2Q9NRE2 1034 aa7.99□□□□□ -1.13
HMGB3P22-202ENST00000451823 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P22-202ENST00000451823 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
HMGB3P22-202ENST00000451823 LRCH3Q96II8 777 aa7.97□□□□□ -1.13
HMGB3P22-202ENST00000451823 TSR3Q9UJK0 312 aaKnown RBP7.97□□□□□ -1.13
HMGB3P22-202ENST00000451823 HPS5Q9UPZ3 1129 aa7.97□□□□□ -1.13
HMGB3P22-202ENST00000451823 A0A0G2JS52 829 aa7.96□□□□□ -1.14
HMGB3P22-202ENST00000451823 C3orf80F5H4A9 247 aa7.96□□□□□ -1.14
HMGB3P22-202ENST00000451823 PPP4CP60510 307 aa7.96□□□□□ -1.14
HMGB3P22-202ENST00000451823 CERKQ8TCT0 537 aa7.96□□□□□ -1.14
HMGB3P22-202ENST00000451823 TATDN2Q93075 761 aa7.96□□□□□ -1.14
HMGB3P22-202ENST00000451823 NYAP1Q6ZVC0 841 aa7.95□□□□□ -1.14
HMGB3P22-202ENST00000451823 PNMA3Q9UL41 463 aa7.95□□□□□ -1.14
HMGB3P22-202ENST00000451823 RGS20O76081 388 aa7.94□□□□□ -1.14
HMGB3P22-202ENST00000451823 ITGBL1O95965 494 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P22-202ENST00000451823 KCNC4Q03721 635 aa7.94□□□□□ -1.14
HMGB3P22-202ENST00000451823 CDHR5Q9HBB8 845 aa7.94□□□□□ -1.14
HMGB3P22-202ENST00000451823 HDGFP51858 240 aaKnown RBP7.93□□□□□ -1.14
HMGB3P22-202ENST00000451823 NUDT18Q6ZVK8 323 aa7.93□□□□□ -1.14
HMGB3P22-202ENST00000451823 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
HMGB3P22-202ENST00000451823 NPDC1Q9NQX5 325 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P22-202ENST00000451823 NISCHQ9Y2I1 1504 aa7.89□□□□□ -1.15
HMGB3P22-202ENST00000451823 MLLT3P42568 568 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P22-202ENST00000451823 ARHGEF1Q92888 912 aaKnown RBP7.89□□□□□ -1.15
HMGB3P22-202ENST00000451823 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
HMGB3P22-202ENST00000451823 IRX2Q9BZI1 471 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P22-202ENST00000451823 PADI6Q6TGC4 694 aa7.86□□□□□ -1.15
HMGB3P22-202ENST00000451823 RNF40O75150 1001 aa7.85□□□□□ -1.15
HMGB3P22-202ENST00000451823 TJAP1Q5JTD0 557 aa7.85□□□□□ -1.15
HMGB3P22-202ENST00000451823 TTC13Q8NBP0 860 aa7.85□□□□□ -1.15
HMGB3P22-202ENST00000451823 KCNV2Q8TDN2 545 aa7.85□□□□□ -1.15
HMGB3P22-202ENST00000451823 RBM27Q9P2N5 1060 aaKnown RBP7.84□□□□□ -1.15
HMGB3P22-202ENST00000451823 SWT1Q5T5J6 900 aaKnown RBP7.83□□□□□ -1.16
HMGB3P22-202ENST00000451823 ZNF516Q92618 1163 aa7.83□□□□□ -1.16
HMGB3P22-202ENST00000451823 EYA1Q99502 592 aa7.82□□□□□ -1.16
HMGB3P22-202ENST00000451823 MTRQ99707 1265 aa7.82□□□□□ -1.16
HMGB3P22-202ENST00000451823 APLP1P51693 650 aa7.81□□□□□ -1.16
HMGB3P22-202ENST00000451823 IL21Q9HBE4 155 aa7.81□□□□□ -1.16
HMGB3P22-202ENST00000451823 NUTM2FA1L443 756 aa7.8□□□□□ -1.16
HMGB3P22-202ENST00000451823 PTGDRQ13258 359 aa7.79□□□□□ -1.16
HMGB3P22-202ENST00000451823 SEMA3EO15041 775 aa7.78□□□□□ -1.16
HMGB3P22-202ENST00000451823 PPP1R18Q6NYC8 613 aa7.78□□□□□ -1.16
HMGB3P22-202ENST00000451823 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
HMGB3P22-202ENST00000451823 NKX2-3Q8TAU0 364 aa7.78□□□□□ -1.16
HMGB3P22-202ENST00000451823 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
HMGB3P22-202ENST00000451823 COPS2P61201 443 aa7.76□□□□□ -1.17
HMGB3P22-202ENST00000451823 SLC4A3P48751 1232 aa7.75□□□□□ -1.17
HMGB3P22-202ENST00000451823 NECTIN2Q92692 538 aa7.75□□□□□ -1.17
HMGB3P22-202ENST00000451823 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.75□□□□□ -1.17
HMGB3P22-202ENST00000451823 Q6ZNB5 142 aa7.74□□□□□ -1.17
HMGB3P22-202ENST00000451823 RBM46Q8TBY0 533 aaKnown RBP7.74□□□□□ -1.17
HMGB3P22-202ENST00000451823 PRKD2Q9BZL6 878 aa7.74□□□□□ -1.17
HMGB3P22-202ENST00000451823 GFRA3O60609 400 aa7.73□□□□□ -1.17
HMGB3P22-202ENST00000451823 P3H3Q8IVL6 736 aa7.73□□□□□ -1.17
HMGB3P22-202ENST00000451823 ADGRG1Q9Y653 693 aa7.73□□□□□ -1.17
HMGB3P22-202ENST00000451823 RCCD1A6NED2 376 aa7.72□□□□□ -1.17
HMGB3P22-202ENST00000451823 DNAJB2P25686 324 aa7.72□□□□□ -1.17
HMGB3P22-202ENST00000451823 ZPR1O75312 459 aa7.71□□□□□ -1.18
HMGB3P22-202ENST00000451823 FCHSD2O94868 740 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms