RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 SMC4Q9NTJ3 1288 aa17.39■□□□□ 0.37
ITGB4-203ENST00000450894 SLC4A3P48751 1232 aa17.38■□□□□ 0.37
ITGB4-203ENST00000450894 ISY1Q9ULR0 285 aaKnown RBP17.38■□□□□ 0.37
ITGB4-203ENST00000450894 TPM3P06753 285 aa17.38■□□□□ 0.37
ITGB4-203ENST00000450894 CRBNQ96SW2 442 aa17.38■□□□□ 0.37
ITGB4-203ENST00000450894 TEX35Q5T0J7 233 aa17.37■□□□□ 0.37
ITGB4-203ENST00000450894 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
ITGB4-203ENST00000450894 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
ITGB4-203ENST00000450894 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
ITGB4-203ENST00000450894 RAPGEF2Q9Y4G8 1499 aa17.36■□□□□ 0.37
ITGB4-203ENST00000450894 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
ITGB4-203ENST00000450894 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
ITGB4-203ENST00000450894 NUP155O75694 1391 aa17.34■□□□□ 0.37
ITGB4-203ENST00000450894 FOXD1Q16676 465 aa17.34■□□□□ 0.37
ITGB4-203ENST00000450894 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.37
ITGB4-203ENST00000450894 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.37
ITGB4-203ENST00000450894 CALRP27797 417 aaKnown RBP17.33■□□□□ 0.36
ITGB4-203ENST00000450894 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
ITGB4-203ENST00000450894 CHMP4CQ96CF2 233 aa17.33■□□□□ 0.36
ITGB4-203ENST00000450894 GPATCH3Q96I76 525 aa17.33■□□□□ 0.36
ITGB4-203ENST00000450894 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
ITGB4-203ENST00000450894 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
ITGB4-203ENST00000450894 CLSTN1O94985 981 aa17.32■□□□□ 0.36
ITGB4-203ENST00000450894 NUCB2P80303 420 aa17.31■□□□□ 0.36
ITGB4-203ENST00000450894 RTF1Q92541 710 aaKnown RBP17.31■□□□□ 0.36
ITGB4-203ENST00000450894 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
ITGB4-203ENST00000450894 GOLGA6L19H0YKK7 550 aa17.3■□□□□ 0.36
ITGB4-203ENST00000450894 CCDC39Q9UFE4 941 aa17.3■□□□□ 0.36
ITGB4-203ENST00000450894 NOL8Q76FK4 1167 aaKnown RBP17.29■□□□□ 0.36
ITGB4-203ENST00000450894 CCDC7Q96M83 1385 aa17.29■□□□□ 0.36
ITGB4-203ENST00000450894 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
ITGB4-203ENST00000450894 USP47Q96K76 1375 aa17.29■□□□□ 0.36
ITGB4-203ENST00000450894 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
ITGB4-203ENST00000450894 FOXD4L5Q5VV16 416 aaPredicted RBP17.28■□□□□ 0.36
ITGB4-203ENST00000450894 FOXD4L4Q8WXT5 416 aaPredicted RBP17.28■□□□□ 0.36
ITGB4-203ENST00000450894 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.36
ITGB4-203ENST00000450894 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.35
ITGB4-203ENST00000450894 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
ITGB4-203ENST00000450894 RRP9O43818 475 aaKnown RBP17.27■□□□□ 0.35
ITGB4-203ENST00000450894 ZNF592Q92610 1267 aa17.27■□□□□ 0.35
ITGB4-203ENST00000450894 SRPK2P78362 688 aaKnown RBP17.26■□□□□ 0.35
ITGB4-203ENST00000450894 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
ITGB4-203ENST00000450894 WIZO95785 1651 aa17.26■□□□□ 0.35
ITGB4-203ENST00000450894 CCDC70Q6NSX1 233 aa17.26■□□□□ 0.35
ITGB4-203ENST00000450894 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
ITGB4-203ENST00000450894 DDX19BQ9UMR2 479 aa17.25■□□□□ 0.35
ITGB4-203ENST00000450894 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
ITGB4-203ENST00000450894 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
ITGB4-203ENST00000450894 BECN2A8MW95 431 aa17.24■□□□□ 0.35
ITGB4-203ENST00000450894 REC8O95072 547 aa17.24■□□□□ 0.35
ITGB4-203ENST00000450894 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
ITGB4-203ENST00000450894 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
ITGB4-203ENST00000450894 CUX1P39880 1505 aa17.22■□□□□ 0.35
ITGB4-203ENST00000450894 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
ITGB4-203ENST00000450894 CARMIL2Q6F5E8 1435 aa17.22■□□□□ 0.35
ITGB4-203ENST00000450894 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
ITGB4-203ENST00000450894 STK31Q9BXU1 1019 aa17.22■□□□□ 0.35
ITGB4-203ENST00000450894 HMGN5P82970 282 aaKnown RBP17.22■□□□□ 0.35
ITGB4-203ENST00000450894 CCDC66A2RUB6 948 aa17.21■□□□□ 0.35
ITGB4-203ENST00000450894 PLIN1O60240 522 aa17.21■□□□□ 0.35
ITGB4-203ENST00000450894 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
ITGB4-203ENST00000450894 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.35
ITGB4-203ENST00000450894 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
ITGB4-203ENST00000450894 ARGLU1Q9NWB6 273 aaPredicted RBP17.21■□□□□ 0.35
ITGB4-203ENST00000450894 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
ITGB4-203ENST00000450894 SMG6Q86US8 1419 aaKnown RBP17.2■□□□□ 0.34
ITGB4-203ENST00000450894 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
ITGB4-203ENST00000450894 CREBRFQ8IUR6 639 aa17.19■□□□□ 0.34
ITGB4-203ENST00000450894 TSR1Q2NL82 804 aaKnown RBP17.19■□□□□ 0.34
ITGB4-203ENST00000450894 TPM1P09493 284 aa17.19■□□□□ 0.34
ITGB4-203ENST00000450894 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
ITGB4-203ENST00000450894 NPHP1O15259 732 aa17.19■□□□□ 0.34
ITGB4-203ENST00000450894 C22orf23Q9BZE7 217 aa17.19■□□□□ 0.34
ITGB4-203ENST00000450894 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
ITGB4-203ENST00000450894 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
ITGB4-203ENST00000450894 LETM1O95202 739 aaPredicted RBP17.18■□□□□ 0.34
ITGB4-203ENST00000450894 PANK3Q9H999 370 aa17.18■□□□□ 0.34
ITGB4-203ENST00000450894 H3BQV1 296 aa17.18■□□□□ 0.34
ITGB4-203ENST00000450894 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
ITGB4-203ENST00000450894 BRPF3Q9ULD4 1205 aa17.18■□□□□ 0.34
ITGB4-203ENST00000450894 ST20-MTHFSA0A0A6YYL1 179 aa17.18■□□□□ 0.34
ITGB4-203ENST00000450894 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
ITGB4-203ENST00000450894 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
ITGB4-203ENST00000450894 TRAK2O60296 914 aa17.17■□□□□ 0.34
ITGB4-203ENST00000450894 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
ITGB4-203ENST00000450894 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
ITGB4-203ENST00000450894 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
ITGB4-203ENST00000450894 IL27Q8NEV9 243 aa17.16■□□□□ 0.34
ITGB4-203ENST00000450894 BACH2Q9BYV9 841 aa17.16■□□□□ 0.34
ITGB4-203ENST00000450894 CWC15Q9P013 229 aaKnown RBP17.16■□□□□ 0.34
ITGB4-203ENST00000450894 KIF21BO75037 1637 aa17.16■□□□□ 0.34
ITGB4-203ENST00000450894 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
ITGB4-203ENST00000450894 TPD52L1Q16890 204 aaPredicted RBP17.15■□□□□ 0.34
ITGB4-203ENST00000450894 ACBD3Q9H3P7 528 aa17.15■□□□□ 0.34
ITGB4-203ENST00000450894 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
ITGB4-203ENST00000450894 APPP05067 770 aa17.15■□□□□ 0.34
ITGB4-203ENST00000450894 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
ITGB4-203ENST00000450894 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
ITGB4-203ENST00000450894 MBD3O95983 291 aa17.15■□□□□ 0.34
ITGB4-203ENST00000450894 HOMER1Q86YM7 354 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms