RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 ZNF326Q5BKZ1 582 aaKnown RBP22.75■■□□□ 1.23
SCUBE2-202ENST00000450649 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
SCUBE2-202ENST00000450649 DDRGK1Q96HY6 314 aa22.74■■□□□ 1.23
SCUBE2-202ENST00000450649 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
SCUBE2-202ENST00000450649 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
SCUBE2-202ENST00000450649 ARHGEF12Q9NZN5 1544 aa22.71■■□□□ 1.23
SCUBE2-202ENST00000450649 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
SCUBE2-202ENST00000450649 KIF15Q9NS87 1388 aa22.71■■□□□ 1.23
SCUBE2-202ENST00000450649 NFKBIBQ15653 356 aa22.7■■□□□ 1.22
SCUBE2-202ENST00000450649 UBE2Q2Q8WVN8 375 aa22.7■■□□□ 1.22
SCUBE2-202ENST00000450649 SHANK2Q9UPX8 1470 aa22.69■■□□□ 1.22
SCUBE2-202ENST00000450649 MYBBP1AQ9BQG0 1328 aaKnown RBP22.69■■□□□ 1.22
SCUBE2-202ENST00000450649 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
SCUBE2-202ENST00000450649 SKAP1Q86WV1 359 aa22.68■■□□□ 1.22
SCUBE2-202ENST00000450649 NUP155O75694 1391 aa22.67■■□□□ 1.22
SCUBE2-202ENST00000450649 CARMIL2Q6F5E8 1435 aa22.67■■□□□ 1.22
SCUBE2-202ENST00000450649 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
SCUBE2-202ENST00000450649 CARD11Q9BXL7 1154 aa22.66■■□□□ 1.22
SCUBE2-202ENST00000450649 KDM5DQ9BY66 1539 aa22.66■■□□□ 1.22
SCUBE2-202ENST00000450649 FRAT1Q92837 279 aaPredicted RBP22.65■■□□□ 1.22
SCUBE2-202ENST00000450649 KTN1Q86UP2 1357 aaKnown RBP22.65■■□□□ 1.22
SCUBE2-202ENST00000450649 PDE3BQ13370 1112 aa22.64■■□□□ 1.22
SCUBE2-202ENST00000450649 RALBP1Q15311 655 aa22.64■■□□□ 1.22
SCUBE2-202ENST00000450649 C9orf84Q5VXU9 1444 aa22.64■■□□□ 1.22
SCUBE2-202ENST00000450649 SYNJ2O15056 1496 aa22.64■■□□□ 1.21
SCUBE2-202ENST00000450649 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
SCUBE2-202ENST00000450649 SLC4A3P48751 1232 aa22.63■■□□□ 1.21
SCUBE2-202ENST00000450649 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
SCUBE2-202ENST00000450649 PLIN1O60240 522 aa22.62■■□□□ 1.21
SCUBE2-202ENST00000450649 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
SCUBE2-202ENST00000450649 PLEKHD1A6NEE1 506 aa22.61■■□□□ 1.21
SCUBE2-202ENST00000450649 CDCA7LQ96GN5 454 aa22.61■■□□□ 1.21
SCUBE2-202ENST00000450649 EIF5BO60841 1220 aaKnown RBP22.6■■□□□ 1.21
SCUBE2-202ENST00000450649 PTPRGP23470 1445 aa22.6■■□□□ 1.21
SCUBE2-202ENST00000450649 JPH4Q96JJ6 628 aa22.6■■□□□ 1.21
SCUBE2-202ENST00000450649 CRBNQ96SW2 442 aa22.59■■□□□ 1.21
SCUBE2-202ENST00000450649 ST20-MTHFSA0A0A6YYL1 179 aa22.58■■□□□ 1.21
SCUBE2-202ENST00000450649 NUP160Q12769 1436 aa22.58■■□□□ 1.21
SCUBE2-202ENST00000450649 TSPY4P0CV99 314 aa22.58■■□□□ 1.21
SCUBE2-202ENST00000450649 TSPY10P0CW01 314 aa22.58■■□□□ 1.21
SCUBE2-202ENST00000450649 DAXXQ9UER7 740 aaPredicted RBP22.58■■□□□ 1.2
SCUBE2-202ENST00000450649 ABCA8O94911 1581 aa22.57■■□□□ 1.2
SCUBE2-202ENST00000450649 ATP10BO94823 1461 aa22.55■■□□□ 1.2
SCUBE2-202ENST00000450649 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
SCUBE2-202ENST00000450649 E9PCH4 1651 aa22.54■■□□□ 1.2
SCUBE2-202ENST00000450649 KDM2AQ9Y2K7 1162 aa22.54■■□□□ 1.2
SCUBE2-202ENST00000450649 DCAF11Q8TEB1 546 aa22.53■■□□□ 1.2
SCUBE2-202ENST00000450649 ARHGEF5Q12774 1597 aa22.53■■□□□ 1.2
SCUBE2-202ENST00000450649 FBLN2P98095 1184 aa22.5■■□□□ 1.19
SCUBE2-202ENST00000450649 PARD3Q8TEW0 1356 aa22.48■■□□□ 1.19
SCUBE2-202ENST00000450649 FRAT2O75474 233 aaPredicted RBP22.47■■□□□ 1.19
SCUBE2-202ENST00000450649 KDM2BQ8NHM5 1336 aa22.47■■□□□ 1.19
SCUBE2-202ENST00000450649 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
SCUBE2-202ENST00000450649 C20orf194Q5TEA3 1177 aa22.46■■□□□ 1.19
SCUBE2-202ENST00000450649 FAM135AQ9P2D6 1515 aa22.45■■□□□ 1.18
SCUBE2-202ENST00000450649 FAM161AQ3B820 660 aa22.45■■□□□ 1.18
SCUBE2-202ENST00000450649 PRAG1Q86YV5 1406 aa22.45■■□□□ 1.18
SCUBE2-202ENST00000450649 C8orf34Q49A92 452 aa22.44■■□□□ 1.18
SCUBE2-202ENST00000450649 FAM43AQ8N2R8 423 aa22.44■■□□□ 1.18
SCUBE2-202ENST00000450649 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
SCUBE2-202ENST00000450649 CCDC141Q6ZP82 1450 aa22.43■■□□□ 1.18
SCUBE2-202ENST00000450649 RSPH4AQ5TD94 716 aa22.43■■□□□ 1.18
SCUBE2-202ENST00000450649 CENPQQ7L2Z9 268 aaPredicted RBP22.43■■□□□ 1.18
SCUBE2-202ENST00000450649 TRPM1Q7Z4N2 1603 aa22.43■■□□□ 1.18
SCUBE2-202ENST00000450649 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
SCUBE2-202ENST00000450649 CCDC144AA2RUR9 1427 aa22.41■■□□□ 1.18
SCUBE2-202ENST00000450649 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
SCUBE2-202ENST00000450649 PER1O15534 1290 aaPredicted RBP22.4■■□□□ 1.18
SCUBE2-202ENST00000450649 BLMP54132 1417 aaPredicted RBP22.39■■□□□ 1.17
SCUBE2-202ENST00000450649 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
SCUBE2-202ENST00000450649 INSRP06213 1382 aa22.37■■□□□ 1.17
SCUBE2-202ENST00000450649 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
SCUBE2-202ENST00000450649 LAMC1P11047 1609 aa22.35■■□□□ 1.17
SCUBE2-202ENST00000450649 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
SCUBE2-202ENST00000450649 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
SCUBE2-202ENST00000450649 ZMYM4Q5VZL5 1548 aa22.34■■□□□ 1.17
SCUBE2-202ENST00000450649 NBPF1Q3BBV0 1214 aa22.34■■□□□ 1.17
SCUBE2-202ENST00000450649 PLA2R1Q13018 1463 aa22.34■■□□□ 1.17
SCUBE2-202ENST00000450649 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
SCUBE2-202ENST00000450649 UNC13BO14795 1591 aa22.33■■□□□ 1.16
SCUBE2-202ENST00000450649 A2MP01023 1474 aa22.33■■□□□ 1.16
SCUBE2-202ENST00000450649 PLEKHH2Q8IVE3 1493 aa22.32■■□□□ 1.16
SCUBE2-202ENST00000450649 PRDM15P57071 1507 aaPredicted RBP22.32■■□□□ 1.16
SCUBE2-202ENST00000450649 RGS3P49796 1198 aa22.32■■□□□ 1.16
SCUBE2-202ENST00000450649 MAST1Q9Y2H9 1570 aa22.31■■□□□ 1.16
SCUBE2-202ENST00000450649 TESK2Q96S53 571 aa22.31■■□□□ 1.16
SCUBE2-202ENST00000450649 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
SCUBE2-202ENST00000450649 DISP3Q9P2K9 1392 aa22.28■■□□□ 1.16
SCUBE2-202ENST00000450649 EIF2AK4Q9P2K8 1649 aaKnown RBP22.27■■□□□ 1.15
SCUBE2-202ENST00000450649 POGKQ9P215 609 aa22.26■■□□□ 1.15
SCUBE2-202ENST00000450649 SYCP2Q9BX26 1530 aa22.26■■□□□ 1.15
SCUBE2-202ENST00000450649 ERBINQ96RT1 1412 aa22.26■■□□□ 1.15
SCUBE2-202ENST00000450649 DUSP27Q5VZP5 1158 aa22.25■■□□□ 1.15
SCUBE2-202ENST00000450649 IQGAP3Q86VI3 1631 aa22.25■■□□□ 1.15
SCUBE2-202ENST00000450649 ATP10AO60312 1499 aa22.25■■□□□ 1.15
SCUBE2-202ENST00000450649 ADAMTS8Q9UP79 889 aa22.24■■□□□ 1.15
SCUBE2-202ENST00000450649 PANK3Q9H999 370 aa22.24■■□□□ 1.15
SCUBE2-202ENST00000450649 TMF1P82094 1093 aa22.23■■□□□ 1.15
SCUBE2-202ENST00000450649 PLXNC1O60486 1568 aa22.22■■□□□ 1.15
SCUBE2-202ENST00000450649 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms