RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 MADDQ8WXG6 1647 aa13.39□□□□□ -0.27
NPHP1-208ENST00000449600 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
NPHP1-208ENST00000449600 MARVELD3Q96A59 401 aa13.38□□□□□ -0.27
NPHP1-208ENST00000449600 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
NPHP1-208ENST00000449600 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
NPHP1-208ENST00000449600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPHP1-208ENST00000449600 IGF1RP08069 1367 aa13.36□□□□□ -0.27
NPHP1-208ENST00000449600 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
NPHP1-208ENST00000449600 PHLDB1Q86UU1 1377 aa13.35□□□□□ -0.27
NPHP1-208ENST00000449600 DISP1Q96F81 1524 aa13.35□□□□□ -0.27
NPHP1-208ENST00000449600 SPNS2Q8IVW8 549 aa13.34□□□□□ -0.27
NPHP1-208ENST00000449600 MMRN1Q13201 1228 aa13.33□□□□□ -0.28
NPHP1-208ENST00000449600 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
NPHP1-208ENST00000449600 IFNLR1Q8IU57 520 aaPredicted RBP13.31□□□□□ -0.28
NPHP1-208ENST00000449600 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
NPHP1-208ENST00000449600 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
NPHP1-208ENST00000449600 IQGAP2Q13576 1575 aa13.3□□□□□ -0.28
NPHP1-208ENST00000449600 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
NPHP1-208ENST00000449600 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
NPHP1-208ENST00000449600 SPOCK2Q92563 424 aa13.27□□□□□ -0.29
NPHP1-208ENST00000449600 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.29
NPHP1-208ENST00000449600 POTEB3A0JP26 581 aa13.26□□□□□ -0.29
NPHP1-208ENST00000449600 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
NPHP1-208ENST00000449600 RAPGEF3O95398 923 aa13.25□□□□□ -0.29
NPHP1-208ENST00000449600 EMP3P54852 163 aa13.25□□□□□ -0.29
NPHP1-208ENST00000449600 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
NPHP1-208ENST00000449600 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
NPHP1-208ENST00000449600 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
NPHP1-208ENST00000449600 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
NPHP1-208ENST00000449600 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
NPHP1-208ENST00000449600 KRTAP3-3Q9BYR6 98 aa13.22□□□□□ -0.29
NPHP1-208ENST00000449600 KRTAP3-2Q9BYR7 98 aa13.22□□□□□ -0.29
NPHP1-208ENST00000449600 FRMPD1Q5SYB0 1578 aa13.22□□□□□ -0.29
NPHP1-208ENST00000449600 NEO1Q92859 1461 aa13.22□□□□□ -0.29
NPHP1-208ENST00000449600 PTPRTO14522 1441 aa13.22□□□□□ -0.29
NPHP1-208ENST00000449600 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.29
NPHP1-208ENST00000449600 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
NPHP1-208ENST00000449600 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
NPHP1-208ENST00000449600 ARHGEF40Q8TER5 1519 aa13.21□□□□□ -0.29
NPHP1-208ENST00000449600 STRCQ7RTU9 1775 aa13.21□□□□□ -0.29
NPHP1-208ENST00000449600 POGZQ7Z3K3 1410 aa13.21□□□□□ -0.3
NPHP1-208ENST00000449600 KIAA0556O60303 1618 aa13.2□□□□□ -0.3
NPHP1-208ENST00000449600 FAM9AQ8IZU1 332 aaPredicted RBP13.19□□□□□ -0.3
NPHP1-208ENST00000449600 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
NPHP1-208ENST00000449600 TTC37Q6PGP7 1564 aa13.19□□□□□ -0.3
NPHP1-208ENST00000449600 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
NPHP1-208ENST00000449600 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
NPHP1-208ENST00000449600 ABCA8O94911 1581 aa13.16□□□□□ -0.3
NPHP1-208ENST00000449600 EEA1Q15075 1411 aa13.16□□□□□ -0.3
NPHP1-208ENST00000449600 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
NPHP1-208ENST00000449600 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
NPHP1-208ENST00000449600 FANCAO15360 1455 aa13.16□□□□□ -0.3
NPHP1-208ENST00000449600 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
NPHP1-208ENST00000449600 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
NPHP1-208ENST00000449600 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
NPHP1-208ENST00000449600 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.31
NPHP1-208ENST00000449600 SIGLEC1Q9BZZ2 1709 aa13.08□□□□□ -0.32
NPHP1-208ENST00000449600 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
NPHP1-208ENST00000449600 FER1L4A9Z1Z3 1794 aa13.08□□□□□ -0.32
NPHP1-208ENST00000449600 G3V3G9 751 aa13.08□□□□□ -0.32
NPHP1-208ENST00000449600 EFCAB3Q8N7B9 438 aa13.08□□□□□ -0.32
NPHP1-208ENST00000449600 DENND4BO75064 1496 aaPredicted RBP13.08□□□□□ -0.32
NPHP1-208ENST00000449600 ZMYM4Q5VZL5 1548 aa13.08□□□□□ -0.32
NPHP1-208ENST00000449600 HOXB1P14653 301 aaPredicted RBP13.07□□□□□ -0.32
NPHP1-208ENST00000449600 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
NPHP1-208ENST00000449600 RICTORQ6R327 1708 aa13.06□□□□□ -0.32
NPHP1-208ENST00000449600 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
NPHP1-208ENST00000449600 ATP10BO94823 1461 aa13.04□□□□□ -0.32
NPHP1-208ENST00000449600 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
NPHP1-208ENST00000449600 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
NPHP1-208ENST00000449600 ZFYVE16Q7Z3T8 1539 aa13.03□□□□□ -0.32
NPHP1-208ENST00000449600 LOC105371045A0A1W2PR82 267 aa13.01□□□□□ -0.33
NPHP1-208ENST00000449600 CEBPAP49715 358 aaPredicted RBP13.01□□□□□ -0.33
NPHP1-208ENST00000449600 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
NPHP1-208ENST00000449600 TMEM92Q6UXU6 159 aa13.01□□□□□ -0.33
NPHP1-208ENST00000449600 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
NPHP1-208ENST00000449600 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
NPHP1-208ENST00000449600 MLECQ14165 292 aa13□□□□□ -0.33
NPHP1-208ENST00000449600 SETD1BQ9UPS6 1966 aaKnown RBP13□□□□□ -0.33
NPHP1-208ENST00000449600 HSPA1LP34931 641 aa12.99□□□□□ -0.33
NPHP1-208ENST00000449600 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
NPHP1-208ENST00000449600 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
NPHP1-208ENST00000449600 RNF25Q96BH1 459 aaPredicted RBP12.98□□□□□ -0.33
NPHP1-208ENST00000449600 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.33
NPHP1-208ENST00000449600 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
NPHP1-208ENST00000449600 ATP10AO60312 1499 aa12.95□□□□□ -0.34
NPHP1-208ENST00000449600 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
NPHP1-208ENST00000449600 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
NPHP1-208ENST00000449600 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
NPHP1-208ENST00000449600 ERBB3P21860 1342 aa12.93□□□□□ -0.34
NPHP1-208ENST00000449600 HECW1Q76N89 1606 aa12.93□□□□□ -0.34
NPHP1-208ENST00000449600 SOX12O15370 315 aa12.92□□□□□ -0.34
NPHP1-208ENST00000449600 TRAPPC8Q9Y2L5 1435 aa12.92□□□□□ -0.34
NPHP1-208ENST00000449600 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
NPHP1-208ENST00000449600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
NPHP1-208ENST00000449600 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
NPHP1-208ENST00000449600 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
NPHP1-208ENST00000449600 RIMBP2O15034 1052 aa12.89□□□□□ -0.35
NPHP1-208ENST00000449600 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
NPHP1-208ENST00000449600 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms