RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 MSNP26038 577 aaKnown RBP15.74■□□□□ 0.11
UBE3B-204ENST00000449510 CDCA8Q53HL2 280 aa15.73■□□□□ 0.11
UBE3B-204ENST00000449510 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
UBE3B-204ENST00000449510 FOXD4L6Q3SYB3 417 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-204ENST00000449510 FOXD4L3Q6VB84 417 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-204ENST00000449510 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
UBE3B-204ENST00000449510 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-204ENST00000449510 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.1
UBE3B-204ENST00000449510 ELL2O00472 640 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-204ENST00000449510 PKNOX2Q96KN3 472 aa15.7■□□□□ 0.1
UBE3B-204ENST00000449510 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
UBE3B-204ENST00000449510 SMC4Q9NTJ3 1288 aa15.69■□□□□ 0.1
UBE3B-204ENST00000449510 CUX1P39880 1505 aa15.69■□□□□ 0.1
UBE3B-204ENST00000449510 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-204ENST00000449510 FAM13BQ9NYF5 915 aa15.68■□□□□ 0.1
UBE3B-204ENST00000449510 BRD4O60885 1362 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-204ENST00000449510 NOL8Q76FK4 1167 aaKnown RBP15.67■□□□□ 0.1
UBE3B-204ENST00000449510 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
UBE3B-204ENST00000449510 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
UBE3B-204ENST00000449510 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
UBE3B-204ENST00000449510 MAPK8IP3Q9UPT6 1336 aa15.66■□□□□ 0.1
UBE3B-204ENST00000449510 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
UBE3B-204ENST00000449510 TRAK2O60296 914 aa15.66■□□□□ 0.1
UBE3B-204ENST00000449510 RBM10P98175 930 aaKnown RBP15.65■□□□□ 0.1
UBE3B-204ENST00000449510 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
UBE3B-204ENST00000449510 PMFBP1Q8TBY8 1022 aa15.65■□□□□ 0.1
UBE3B-204ENST00000449510 PANK2Q9BZ23 570 aa15.64■□□□□ 0.09
UBE3B-204ENST00000449510 GBP4Q96PP9 640 aa15.64■□□□□ 0.09
UBE3B-204ENST00000449510 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
UBE3B-204ENST00000449510 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
UBE3B-204ENST00000449510 MPNDQ8N594 471 aa15.63■□□□□ 0.09
UBE3B-204ENST00000449510 LNPKQ9C0E8 428 aa15.63■□□□□ 0.09
UBE3B-204ENST00000449510 C22orf23Q9BZE7 217 aa15.62■□□□□ 0.09
UBE3B-204ENST00000449510 STK26Q9P289 416 aa15.62■□□□□ 0.09
UBE3B-204ENST00000449510 PDZRN3Q9UPQ7 1066 aa15.62■□□□□ 0.09
UBE3B-204ENST00000449510 E9PSI1 815 aa15.61■□□□□ 0.09
UBE3B-204ENST00000449510 PPP2R1AP30153 589 aa15.61■□□□□ 0.09
UBE3B-204ENST00000449510 SEC24BO95487 1268 aa15.61■□□□□ 0.09
UBE3B-204ENST00000449510 UBE2Q2Q8WVN8 375 aa15.61■□□□□ 0.09
UBE3B-204ENST00000449510 CGNL1Q0VF96 1302 aa15.61■□□□□ 0.09
UBE3B-204ENST00000449510 IGHDP01880 384 aa15.6■□□□□ 0.09
UBE3B-204ENST00000449510 TRAK1Q9UPV9 953 aa15.6■□□□□ 0.09
UBE3B-204ENST00000449510 ANKRD30BQ9BXX2 1392 aa15.6■□□□□ 0.09
UBE3B-204ENST00000449510 CHMP5Q9NZZ3 219 aa15.59■□□□□ 0.09
UBE3B-204ENST00000449510 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
UBE3B-204ENST00000449510 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
UBE3B-204ENST00000449510 SOX12O15370 315 aa15.59■□□□□ 0.09
UBE3B-204ENST00000449510 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.09
UBE3B-204ENST00000449510 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.08
UBE3B-204ENST00000449510 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
UBE3B-204ENST00000449510 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-204ENST00000449510 PCF11O94913 1555 aaKnown RBP15.56■□□□□ 0.08
UBE3B-204ENST00000449510 C8orf34Q49A92 452 aa15.56■□□□□ 0.08
UBE3B-204ENST00000449510 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
UBE3B-204ENST00000449510 MCM4P33991 863 aa15.55■□□□□ 0.08
UBE3B-204ENST00000449510 SRPK2P78362 688 aaKnown RBP15.55■□□□□ 0.08
UBE3B-204ENST00000449510 RRAGDQ9NQL2 400 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-204ENST00000449510 R3HCC1Q9Y3T6 440 aaKnown RBP15.55■□□□□ 0.08
UBE3B-204ENST00000449510 TSR2Q969E8 191 aaKnown RBP15.54■□□□□ 0.08
UBE3B-204ENST00000449510 ZMYND15Q9H091 742 aa15.54■□□□□ 0.08
UBE3B-204ENST00000449510 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
UBE3B-204ENST00000449510 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
UBE3B-204ENST00000449510 RNF214Q8ND24 703 aa15.54■□□□□ 0.08
UBE3B-204ENST00000449510 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
UBE3B-204ENST00000449510 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
UBE3B-204ENST00000449510 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-204ENST00000449510 DUSP27Q5VZP5 1158 aa15.53■□□□□ 0.08
UBE3B-204ENST00000449510 DDX11L8A8MPP1 907 aa15.53■□□□□ 0.08
UBE3B-204ENST00000449510 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
UBE3B-204ENST00000449510 TCP11L2Q8N4U5 519 aa15.52■□□□□ 0.08
UBE3B-204ENST00000449510 MRE11P49959 708 aa15.52■□□□□ 0.07
UBE3B-204ENST00000449510 ZKSCAN2Q63HK3 967 aa15.52■□□□□ 0.07
UBE3B-204ENST00000449510 ESPNB1AK53 854 aa15.52■□□□□ 0.07
UBE3B-204ENST00000449510 MAP3K1Q13233 1512 aa15.51■□□□□ 0.07
UBE3B-204ENST00000449510 XRCC6P12956 609 aaKnown RBP eCLIP15.51■□□□□ 0.07
UBE3B-204ENST00000449510 TNNQ9UQP3 1299 aa15.51■□□□□ 0.07
UBE3B-204ENST00000449510 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
UBE3B-204ENST00000449510 DZIP1LQ8IYY4 767 aaKnown RBP15.51■□□□□ 0.07
UBE3B-204ENST00000449510 C1orf115Q9H7X2 142 aa15.5■□□□□ 0.07
UBE3B-204ENST00000449510 GRPEL1Q9HAV7 217 aa15.5■□□□□ 0.07
UBE3B-204ENST00000449510 MCTP1Q6DN14 999 aa15.5■□□□□ 0.07
UBE3B-204ENST00000449510 SLFN5Q08AF3 891 aa15.49■□□□□ 0.07
UBE3B-204ENST00000449510 GGT6Q6P531 493 aa15.49■□□□□ 0.07
UBE3B-204ENST00000449510 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-204ENST00000449510 DHX29Q7Z478 1369 aaKnown RBP15.47■□□□□ 0.07
UBE3B-204ENST00000449510 NASPP49321 788 aaPredicted RBP15.47■□□□□ 0.07
UBE3B-204ENST00000449510 CAVIN1Q6NZI2 390 aaKnown RBP15.47■□□□□ 0.07
UBE3B-204ENST00000449510 KIF3BO15066 747 aa15.47■□□□□ 0.07
UBE3B-204ENST00000449510 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
UBE3B-204ENST00000449510 MTHFSP49914 203 aa15.46■□□□□ 0.07
UBE3B-204ENST00000449510 KIAA1211Q6ZU35 1233 aa15.46■□□□□ 0.07
UBE3B-204ENST00000449510 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
UBE3B-204ENST00000449510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.46■□□□□ 0.07
UBE3B-204ENST00000449510 IPO8O15397 1037 aaKnown RBP15.46■□□□□ 0.07
UBE3B-204ENST00000449510 CASC1Q6TDU7 716 aa15.46■□□□□ 0.07
UBE3B-204ENST00000449510 CFAP70Q5T0N1 1121 aa15.45■□□□□ 0.06
UBE3B-204ENST00000449510 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
UBE3B-204ENST00000449510 PTPN23Q9H3S7 1636 aa15.45■□□□□ 0.06
UBE3B-204ENST00000449510 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
UBE3B-204ENST00000449510 KIAA1107Q9UPP5 1409 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms