RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 CARMIL2Q6F5E8 1435 aa18.45■□□□□ 0.54
POLR1B-209ENST00000448770 PLEKHD1A6NEE1 506 aa18.44■□□□□ 0.54
POLR1B-209ENST00000448770 MYBBP1AQ9BQG0 1328 aaKnown RBP18.43■□□□□ 0.54
POLR1B-209ENST00000448770 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
POLR1B-209ENST00000448770 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
POLR1B-209ENST00000448770 SAMD9LQ8IVG5 1584 aa18.41■□□□□ 0.54
POLR1B-209ENST00000448770 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
POLR1B-209ENST00000448770 FAM135AQ9P2D6 1515 aa18.41■□□□□ 0.54
POLR1B-209ENST00000448770 ARHGEF5Q12774 1597 aa18.4■□□□□ 0.54
POLR1B-209ENST00000448770 SALL2Q9Y467 1007 aaPredicted RBP18.4■□□□□ 0.54
POLR1B-209ENST00000448770 NBPF1Q3BBV0 1214 aa18.39■□□□□ 0.53
POLR1B-209ENST00000448770 PRAG1Q86YV5 1406 aa18.39■□□□□ 0.53
POLR1B-209ENST00000448770 PLA2R1Q13018 1463 aa18.38■□□□□ 0.53
POLR1B-209ENST00000448770 TSPY4P0CV99 314 aa18.38■□□□□ 0.53
POLR1B-209ENST00000448770 TSPY10P0CW01 314 aa18.38■□□□□ 0.53
POLR1B-209ENST00000448770 CDC42BPBQ9Y5S2 1711 aa18.38■□□□□ 0.53
POLR1B-209ENST00000448770 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
POLR1B-209ENST00000448770 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
POLR1B-209ENST00000448770 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
POLR1B-209ENST00000448770 RALBP1Q15311 655 aa18.37■□□□□ 0.53
POLR1B-209ENST00000448770 CHD1O14646 1710 aa18.35■□□□□ 0.53
POLR1B-209ENST00000448770 PER1O15534 1290 aaPredicted RBP18.35■□□□□ 0.53
POLR1B-209ENST00000448770 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
POLR1B-209ENST00000448770 NBR1Q14596 966 aa18.34■□□□□ 0.53
POLR1B-209ENST00000448770 A2MP01023 1474 aa18.34■□□□□ 0.53
POLR1B-209ENST00000448770 RGL3Q3MIN7 710 aa18.33■□□□□ 0.53
POLR1B-209ENST00000448770 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.53
POLR1B-209ENST00000448770 PREX2Q70Z35 1606 aa18.33■□□□□ 0.52
POLR1B-209ENST00000448770 DEKP35659 375 aaKnown RBP18.33■□□□□ 0.52
POLR1B-209ENST00000448770 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
POLR1B-209ENST00000448770 KTN1Q86UP2 1357 aaKnown RBP18.33■□□□□ 0.52
POLR1B-209ENST00000448770 SYCP2Q9BX26 1530 aa18.31■□□□□ 0.52
POLR1B-209ENST00000448770 NLRP13Q86W25 1043 aa18.31■□□□□ 0.52
POLR1B-209ENST00000448770 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
POLR1B-209ENST00000448770 CCDC144AA2RUR9 1427 aa18.31■□□□□ 0.52
POLR1B-209ENST00000448770 COL17A1Q9UMD9 1497 aaPredicted RBP18.31■□□□□ 0.52
POLR1B-209ENST00000448770 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
POLR1B-209ENST00000448770 TESK2Q96S53 571 aa18.3■□□□□ 0.52
POLR1B-209ENST00000448770 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
POLR1B-209ENST00000448770 UNC13BO14795 1591 aa18.29■□□□□ 0.52
POLR1B-209ENST00000448770 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
POLR1B-209ENST00000448770 TTC37Q6PGP7 1564 aa18.28■□□□□ 0.52
POLR1B-209ENST00000448770 MYO5CQ9NQX4 1742 aa18.27■□□□□ 0.52
POLR1B-209ENST00000448770 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.52
POLR1B-209ENST00000448770 SKAP1Q86WV1 359 aa18.26■□□□□ 0.51
POLR1B-209ENST00000448770 ANP32AP39687 249 aaKnown RBP18.26■□□□□ 0.51
POLR1B-209ENST00000448770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■□□□ 13
POLR1B-209ENST00000448770 PLIN1O60240 522 aa18.25■□□□□ 0.51
POLR1B-209ENST00000448770 PLEKHH2Q8IVE3 1493 aa18.24■□□□□ 0.51
POLR1B-209ENST00000448770 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
POLR1B-209ENST00000448770 LAMC1P11047 1609 aa18.23■□□□□ 0.51
POLR1B-209ENST00000448770 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
POLR1B-209ENST00000448770 PANK3Q9H999 370 aa18.22■□□□□ 0.51
POLR1B-209ENST00000448770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.22■□□□□ 0.51
POLR1B-209ENST00000448770 IQGAP3Q86VI3 1631 aa18.22■□□□□ 0.51
POLR1B-209ENST00000448770 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
POLR1B-209ENST00000448770 ARHGAP5Q13017 1502 aa18.21■□□□□ 0.5
POLR1B-209ENST00000448770 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
POLR1B-209ENST00000448770 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
POLR1B-209ENST00000448770 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
POLR1B-209ENST00000448770 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
POLR1B-209ENST00000448770 ZBTB47Q9UFB7 747 aaPredicted RBP18.19■□□□□ 0.5
POLR1B-209ENST00000448770 PDE4AP27815 886 aa18.18■□□□□ 0.5
POLR1B-209ENST00000448770 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
POLR1B-209ENST00000448770 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
POLR1B-209ENST00000448770 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
POLR1B-209ENST00000448770 MAGI2Q86UL8 1455 aa18.16■□□□□ 0.5
POLR1B-209ENST00000448770 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
POLR1B-209ENST00000448770 C20orf194Q5TEA3 1177 aa18.16■□□□□ 0.5
POLR1B-209ENST00000448770 BACH2Q9BYV9 841 aa18.15■□□□□ 0.5
POLR1B-209ENST00000448770 ZMYM4Q5VZL5 1548 aa18.15■□□□□ 0.5
POLR1B-209ENST00000448770 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
POLR1B-209ENST00000448770 EIF2AK4Q9P2K8 1649 aaKnown RBP18.15■□□□□ 0.5
POLR1B-209ENST00000448770 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.5
POLR1B-209ENST00000448770 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.49
POLR1B-209ENST00000448770 ATP10AO60312 1499 aa18.13■□□□□ 0.49
POLR1B-209ENST00000448770 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
POLR1B-209ENST00000448770 PLEKHH1Q9ULM0 1364 aa18.12■□□□□ 0.49
POLR1B-209ENST00000448770 WASHC2CQ9Y4E1 1318 aa18.12■□□□□ 0.49
POLR1B-209ENST00000448770 ADAMTS8Q9UP79 889 aa18.12■□□□□ 0.49
POLR1B-209ENST00000448770 INSRP06213 1382 aa18.11■□□□□ 0.49
POLR1B-209ENST00000448770 TMF1P82094 1093 aa18.1■□□□□ 0.49
POLR1B-209ENST00000448770 DUOX2Q9NRD8 1548 aa18.1■□□□□ 0.49
POLR1B-209ENST00000448770 MADDQ8WXG6 1647 aa18.1■□□□□ 0.49
POLR1B-209ENST00000448770 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
POLR1B-209ENST00000448770 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.49
POLR1B-209ENST00000448770 MS4A1P11836 297 aa18.08■□□□□ 0.48
POLR1B-209ENST00000448770 PPP2R1AP30153 589 aa18.06■□□□□ 0.48
POLR1B-209ENST00000448770 AMER1Q5JTC6 1135 aaPredicted RBP18.06■□□□□ 0.48
POLR1B-209ENST00000448770 TRAPPC8Q9Y2L5 1435 aa18.05■□□□□ 0.48
POLR1B-209ENST00000448770 ABCC2Q92887 1545 aa18.05■□□□□ 0.48
POLR1B-209ENST00000448770 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
POLR1B-209ENST00000448770 KDM2BQ8NHM5 1336 aa18.04■□□□□ 0.48
POLR1B-209ENST00000448770 ZNF521Q96K83 1311 aa18.04■□□□□ 0.48
POLR1B-209ENST00000448770 MYOM1P52179 1685 aa18.03■□□□□ 0.48
POLR1B-209ENST00000448770 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
POLR1B-209ENST00000448770 ABCC1P33527 1531 aa18.02■□□□□ 0.47
POLR1B-209ENST00000448770 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
POLR1B-209ENST00000448770 CLTCL1P53675 1640 aa18■□□□□ 0.47
POLR1B-209ENST00000448770 PLCH2O75038 1416 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms