RNA–Protein interactions for RNA: ENST00000448644.2

VNN3-209, Transcript of vanin 3, humanhuman

TSL 4

Gene VNN3, Length 1,036 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-209ENST00000448644 SMYD5Q6GMV2 418 aa11.84□□□□□ -0.51
VNN3-209ENST00000448644 MAP3K7O43318 606 aa11.83□□□□□ -0.52
VNN3-209ENST00000448644 C6orf132Q5T0Z8 1188 aa11.83□□□□□ -0.52
VNN3-209ENST00000448644 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
VNN3-209ENST00000448644 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
VNN3-209ENST00000448644 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
VNN3-209ENST00000448644 SPNS2Q8IVW8 549 aa11.81□□□□□ -0.52
VNN3-209ENST00000448644 OSBPP22059 807 aa11.8□□□□□ -0.52
VNN3-209ENST00000448644 DMRTA1Q5VZB9 504 aa11.8□□□□□ -0.52
VNN3-209ENST00000448644 SEMA3EO15041 775 aa11.79□□□□□ -0.52
VNN3-209ENST00000448644 ADGRD1Q6QNK2 874 aa11.79□□□□□ -0.52
VNN3-209ENST00000448644 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
VNN3-209ENST00000448644 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
VNN3-209ENST00000448644 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
VNN3-209ENST00000448644 MLLT3P42568 568 aaPredicted RBP11.77□□□□□ -0.53
VNN3-209ENST00000448644 TESPA1A2RU30 521 aaPredicted RBP11.76□□□□□ -0.53
VNN3-209ENST00000448644 ZBED2Q9BTP6 218 aa11.76□□□□□ -0.53
VNN3-209ENST00000448644 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
VNN3-209ENST00000448644 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
VNN3-209ENST00000448644 VPS9D1Q9Y2B5 631 aa11.75□□□□□ -0.53
VNN3-209ENST00000448644 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
VNN3-209ENST00000448644 COL9A1P20849 921 aa11.73□□□□□ -0.53
VNN3-209ENST00000448644 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
VNN3-209ENST00000448644 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
VNN3-209ENST00000448644 NBPF3Q9H094 633 aa11.71□□□□□ -0.53
VNN3-209ENST00000448644 HRO43593 1189 aa11.7□□□□□ -0.54
VNN3-209ENST00000448644 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
VNN3-209ENST00000448644 RABGEF1Q9UJ41 708 aa11.7□□□□□ -0.54
VNN3-209ENST00000448644 PRIM1P49642 420 aaKnown RBP11.69□□□□□ -0.54
VNN3-209ENST00000448644 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
VNN3-209ENST00000448644 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
VNN3-209ENST00000448644 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
VNN3-209ENST00000448644 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
VNN3-209ENST00000448644 PRSS12P56730 875 aa11.66□□□□□ -0.54
VNN3-209ENST00000448644 PROX2Q3B8N5 592 aa11.66□□□□□ -0.54
VNN3-209ENST00000448644 BHMG1C9JSJ3 638 aaPredicted RBP11.65□□□□□ -0.54
VNN3-209ENST00000448644 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
VNN3-209ENST00000448644 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
VNN3-209ENST00000448644 CDCA7LQ96GN5 454 aa11.64□□□□□ -0.55
VNN3-209ENST00000448644 CDHR5Q9HBB8 845 aa11.64□□□□□ -0.55
VNN3-209ENST00000448644 GOLGA8CPA6NN73 597 aa11.63□□□□□ -0.55
VNN3-209ENST00000448644 LAPTM4BQ86VI4 370 aa11.63□□□□□ -0.55
VNN3-209ENST00000448644 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
VNN3-209ENST00000448644 FCHSD2O94868 740 aa11.61□□□□□ -0.55
VNN3-209ENST00000448644 PTGDRQ13258 359 aa11.61□□□□□ -0.55
VNN3-209ENST00000448644 NPDC1Q9NQX5 325 aaPredicted RBP11.61□□□□□ -0.55
VNN3-209ENST00000448644 NBPF26B4DH59 902 aa11.59□□□□□ -0.55
VNN3-209ENST00000448644 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
VNN3-209ENST00000448644 TSKSQ9UJT2 592 aa11.59□□□□□ -0.55
VNN3-209ENST00000448644 HIC1Q14526 733 aa11.56□□□□□ -0.56
VNN3-209ENST00000448644 FAM98CQ17RN3 349 aaKnown RBP11.56□□□□□ -0.56
VNN3-209ENST00000448644 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
VNN3-209ENST00000448644 GPIHBP1Q8IV16 184 aa11.55□□□□□ -0.56
VNN3-209ENST00000448644 TTC13Q8NBP0 860 aa11.55□□□□□ -0.56
VNN3-209ENST00000448644 TATDN2Q93075 761 aa11.54□□□□□ -0.56
VNN3-209ENST00000448644 ANKK1Q8NFD2 765 aa11.53□□□□□ -0.56
VNN3-209ENST00000448644 WNT2BQ93097 391 aa11.53□□□□□ -0.56
VNN3-209ENST00000448644 KCTD12Q96CX2 325 aaKnown RBP11.53□□□□□ -0.56
VNN3-209ENST00000448644 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
VNN3-209ENST00000448644 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
VNN3-209ENST00000448644 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
VNN3-209ENST00000448644 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
VNN3-209ENST00000448644 HCSTQ9UBK5 93 aa11.51□□□□□ -0.57
VNN3-209ENST00000448644 FAM198AQ9UFP1 575 aa11.51□□□□□ -0.57
VNN3-209ENST00000448644 GNPATO15228 680 aa11.5□□□□□ -0.57
VNN3-209ENST00000448644 NUDT18Q6ZVK8 323 aa11.5□□□□□ -0.57
VNN3-209ENST00000448644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
VNN3-209ENST00000448644 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
VNN3-209ENST00000448644 THSD4Q6ZMP0 1018 aa11.47□□□□□ -0.57
VNN3-209ENST00000448644 BCANQ96GW7 911 aa11.47□□□□□ -0.57
VNN3-209ENST00000448644 OATP04181 439 aa11.46□□□□□ -0.57
VNN3-209ENST00000448644 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
VNN3-209ENST00000448644 SMAPO00193 183 aa11.45□□□□□ -0.58
VNN3-209ENST00000448644 GPR37O15354 613 aa11.45□□□□□ -0.58
VNN3-209ENST00000448644 LRCH3Q96II8 777 aa11.45□□□□□ -0.58
VNN3-209ENST00000448644 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
VNN3-209ENST00000448644 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
VNN3-209ENST00000448644 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
VNN3-209ENST00000448644 ADGRG1Q9Y653 693 aa11.44□□□□□ -0.58
VNN3-209ENST00000448644 EYA1Q99502 592 aa11.43□□□□□ -0.58
VNN3-209ENST00000448644 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
VNN3-209ENST00000448644 PTPN5P54829 565 aa11.41□□□□□ -0.58
VNN3-209ENST00000448644 C3orf80F5H4A9 247 aa11.4□□□□□ -0.58
VNN3-209ENST00000448644 DNAJB2P25686 324 aa11.4□□□□□ -0.58
VNN3-209ENST00000448644 NYAP1Q6ZVC0 841 aa11.4□□□□□ -0.58
VNN3-209ENST00000448644 SAMD7Q7Z3H4 446 aa11.39□□□□□ -0.59
VNN3-209ENST00000448644 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
VNN3-209ENST00000448644 BCAMP50895 628 aa11.38□□□□□ -0.59
VNN3-209ENST00000448644 TSR3Q9UJK0 312 aaKnown RBP11.38□□□□□ -0.59
VNN3-209ENST00000448644 FECHP22830 423 aa11.37□□□□□ -0.59
VNN3-209ENST00000448644 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
VNN3-209ENST00000448644 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
VNN3-209ENST00000448644 PPP4CP60510 307 aa11.36□□□□□ -0.59
VNN3-209ENST00000448644 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
VNN3-209ENST00000448644 HPS5Q9UPZ3 1129 aa11.36□□□□□ -0.59
VNN3-209ENST00000448644 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
VNN3-209ENST00000448644 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
VNN3-209ENST00000448644 METTL3Q86U44 580 aaKnown RBP11.35□□□□□ -0.59
VNN3-209ENST00000448644 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
VNN3-209ENST00000448644 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms