RNA–Protein interactions for RNA: ENST00000448644.2

VNN3-209, Transcript of vanin 3, humanhuman

TSL 4

Gene VNN3, Length 1,036 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-209ENST00000448644 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
VNN3-209ENST00000448644 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
VNN3-209ENST00000448644 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
VNN3-209ENST00000448644 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
VNN3-209ENST00000448644 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.05
VNN3-209ENST00000448644 FOXD1Q16676 465 aa21.57■■□□□ 1.04
VNN3-209ENST00000448644 ADRA2BP18089 450 aa20.57■□□□□ 0.88
VNN3-209ENST00000448644 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
VNN3-209ENST00000448644 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
VNN3-209ENST00000448644 MSH5O43196 834 aa20.09■□□□□ 0.81
VNN3-209ENST00000448644 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
VNN3-209ENST00000448644 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
VNN3-209ENST00000448644 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
VNN3-209ENST00000448644 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
VNN3-209ENST00000448644 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
VNN3-209ENST00000448644 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
VNN3-209ENST00000448644 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
VNN3-209ENST00000448644 KCNA4P22459 653 aa18.23■□□□□ 0.51
VNN3-209ENST00000448644 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
VNN3-209ENST00000448644 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
VNN3-209ENST00000448644 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
VNN3-209ENST00000448644 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
VNN3-209ENST00000448644 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
VNN3-209ENST00000448644 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
VNN3-209ENST00000448644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
VNN3-209ENST00000448644 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
VNN3-209ENST00000448644 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
VNN3-209ENST00000448644 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
VNN3-209ENST00000448644 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
VNN3-209ENST00000448644 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
VNN3-209ENST00000448644 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
VNN3-209ENST00000448644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
VNN3-209ENST00000448644 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
VNN3-209ENST00000448644 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
VNN3-209ENST00000448644 APLP2Q06481 763 aa16.74■□□□□ 0.27
VNN3-209ENST00000448644 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
VNN3-209ENST00000448644 ZBTB22O15209 634 aa16.7■□□□□ 0.26
VNN3-209ENST00000448644 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
VNN3-209ENST00000448644 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
VNN3-209ENST00000448644 CAPN15O75808 1086 aa16.49■□□□□ 0.23
VNN3-209ENST00000448644 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
VNN3-209ENST00000448644 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
VNN3-209ENST00000448644 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
VNN3-209ENST00000448644 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
VNN3-209ENST00000448644 DSG3P32926 999 aa16.22■□□□□ 0.19
VNN3-209ENST00000448644 ATF5Q9Y2D1 282 aaPredicted RBP16.2■□□□□ 0.18
VNN3-209ENST00000448644 ABCB7O75027 752 aa16.09■□□□□ 0.17
VNN3-209ENST00000448644 POLA2Q14181 598 aa16.05■□□□□ 0.16
VNN3-209ENST00000448644 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
VNN3-209ENST00000448644 FBLN2P98095 1184 aa15.74■□□□□ 0.11
VNN3-209ENST00000448644 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
VNN3-209ENST00000448644 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
VNN3-209ENST00000448644 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
VNN3-209ENST00000448644 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
VNN3-209ENST00000448644 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
VNN3-209ENST00000448644 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
VNN3-209ENST00000448644 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
VNN3-209ENST00000448644 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
VNN3-209ENST00000448644 SSUH2Q9Y2M2 353 aa15.2■□□□□ 0.02
VNN3-209ENST00000448644 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
VNN3-209ENST00000448644 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
VNN3-209ENST00000448644 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
VNN3-209ENST00000448644 FKBP8Q14318 412 aa15.01□□□□□ -0.01
VNN3-209ENST00000448644 SPDYE1Q8NFV5 336 aaPredicted RBP15□□□□□ -0.01
VNN3-209ENST00000448644 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
VNN3-209ENST00000448644 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
VNN3-209ENST00000448644 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
VNN3-209ENST00000448644 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
VNN3-209ENST00000448644 PROM2Q8N271 834 aa14.88□□□□□ -0.03
VNN3-209ENST00000448644 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
VNN3-209ENST00000448644 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
VNN3-209ENST00000448644 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
VNN3-209ENST00000448644 PIP4P2Q8N4L2 257 aa14.65□□□□□ -0.06
VNN3-209ENST00000448644 POTEHQ6S545 545 aa14.63□□□□□ -0.07
VNN3-209ENST00000448644 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
VNN3-209ENST00000448644 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
VNN3-209ENST00000448644 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
VNN3-209ENST00000448644 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
VNN3-209ENST00000448644 MIER1Q8N108 512 aa14.44□□□□□ -0.1
VNN3-209ENST00000448644 PLCD3Q8N3E9 789 aa14.42□□□□□ -0.1
VNN3-209ENST00000448644 FARP1Q9Y4F1 1045 aaPredicted RBP14.39□□□□□ -0.11
VNN3-209ENST00000448644 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
VNN3-209ENST00000448644 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
VNN3-209ENST00000448644 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
VNN3-209ENST00000448644 HAX1O00165 279 aa14.29□□□□□ -0.12
VNN3-209ENST00000448644 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
VNN3-209ENST00000448644 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
VNN3-209ENST00000448644 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
VNN3-209ENST00000448644 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
VNN3-209ENST00000448644 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
VNN3-209ENST00000448644 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
VNN3-209ENST00000448644 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
VNN3-209ENST00000448644 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
VNN3-209ENST00000448644 NUBP1P53384 320 aa14.03□□□□□ -0.16
VNN3-209ENST00000448644 CLCN6P51797 869 aa14.01□□□□□ -0.17
VNN3-209ENST00000448644 EVX2Q03828 476 aa14.01□□□□□ -0.17
VNN3-209ENST00000448644 SP7Q8TDD2 431 aaPredicted RBP14.01□□□□□ -0.17
VNN3-209ENST00000448644 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
VNN3-209ENST00000448644 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
VNN3-209ENST00000448644 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms