RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 GOLGA8CPA6NN73 597 aa7.07□□□□□ -1.28
PTPN12-208ENST00000447995 PHF14O94880 888 aa7.07□□□□□ -1.28
PTPN12-208ENST00000447995 CAMK2BQ13554 666 aa7.07□□□□□ -1.28
PTPN12-208ENST00000447995 TYW1BQ6NUM6 668 aa7.07□□□□□ -1.28
PTPN12-208ENST00000447995 FBXW7Q969H0 707 aa7.06□□□□□ -1.28
PTPN12-208ENST00000447995 A0A0G2JS52 829 aa7.05□□□□□ -1.28
PTPN12-208ENST00000447995 RABGEF1Q9UJ41 708 aa7.05□□□□□ -1.28
PTPN12-208ENST00000447995 DPYSL4O14531 572 aa7.03□□□□□ -1.28
PTPN12-208ENST00000447995 ANKK1Q8NFD2 765 aa7.02□□□□□ -1.29
PTPN12-208ENST00000447995 RGS20O76081 388 aa7.01□□□□□ -1.29
PTPN12-208ENST00000447995 BCAMP50895 628 aa7.01□□□□□ -1.29
PTPN12-208ENST00000447995 LAPTM4BQ86VI4 370 aa7.01□□□□□ -1.29
PTPN12-208ENST00000447995 EPAS1Q99814 870 aa7.01□□□□□ -1.29
PTPN12-208ENST00000447995 ITGBL1O95965 494 aaPredicted RBP7□□□□□ -1.29
PTPN12-208ENST00000447995 SOWAHBA6NEL2 793 aa6.99□□□□□ -1.29
PTPN12-208ENST00000447995 C6orf132Q5T0Z8 1188 aa6.99□□□□□ -1.29
PTPN12-208ENST00000447995 KIAA1468Q9P260 1216 aa6.99□□□□□ -1.29
PTPN12-208ENST00000447995 TRIM6-TRIM34B2RNG4 842 aa6.98□□□□□ -1.29
PTPN12-208ENST00000447995 ONECUT3O60422 494 aaPredicted RBP6.98□□□□□ -1.29
PTPN12-208ENST00000447995 RTN4Q9NQC3 1192 aaKnown RBP6.98□□□□□ -1.29
PTPN12-208ENST00000447995 SEPT9Q9UHD8 586 aaPredicted RBP6.98□□□□□ -1.29
PTPN12-208ENST00000447995 PDIA6Q15084 440 aa6.97□□□□□ -1.29
PTPN12-208ENST00000447995 DDX12PQ92771 950 aa6.97□□□□□ -1.29
PTPN12-208ENST00000447995 RBM33Q96EV2 1170 aaKnown RBP6.97□□□□□ -1.29
PTPN12-208ENST00000447995 ZFRQ96KR1 1074 aaKnown RBP6.97□□□□□ -1.29
PTPN12-208ENST00000447995 EN1Q05925 392 aaPredicted RBP6.95□□□□□ -1.3
PTPN12-208ENST00000447995 BBXQ8WY36 941 aaPredicted RBP6.95□□□□□ -1.3
PTPN12-208ENST00000447995 NBR1Q14596 966 aa6.94□□□□□ -1.3
PTPN12-208ENST00000447995 FAM98CQ17RN3 349 aaKnown RBP6.94□□□□□ -1.3
PTPN12-208ENST00000447995 TSR1Q2NL82 804 aaKnown RBP6.94□□□□□ -1.3
PTPN12-208ENST00000447995 NYAP1Q6ZVC0 841 aa6.94□□□□□ -1.3
PTPN12-208ENST00000447995 WBP1LQ9NX94 342 aa6.94□□□□□ -1.3
PTPN12-208ENST00000447995 MYO15BQ96JP2 1530 aa6.94□□□□□ -1.3
PTPN12-208ENST00000447995 IRX2Q9BZI1 471 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-208ENST00000447995 SUPT5HO00267 1087 aaKnown RBP6.92□□□□□ -1.3
PTPN12-208ENST00000447995 TSKSQ9UJT2 592 aa6.92□□□□□ -1.3
PTPN12-208ENST00000447995 MAP3K7O43318 606 aa6.91□□□□□ -1.3
PTPN12-208ENST00000447995 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
PTPN12-208ENST00000447995 LRCH3Q96II8 777 aa6.91□□□□□ -1.3
PTPN12-208ENST00000447995 HPS5Q9UPZ3 1129 aa6.91□□□□□ -1.3
PTPN12-208ENST00000447995 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.9□□□□□ -1.3
PTPN12-208ENST00000447995 TSR3Q9UJK0 312 aaKnown RBP6.9□□□□□ -1.3
PTPN12-208ENST00000447995 SPDYE16A6NNV3 312 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-208ENST00000447995 FAM198AQ9UFP1 575 aa6.89□□□□□ -1.31
PTPN12-208ENST00000447995 KCNC4Q03721 635 aa6.88□□□□□ -1.31
PTPN12-208ENST00000447995 ARIH1Q9Y4X5 557 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-208ENST00000447995 C3orf80F5H4A9 247 aa6.87□□□□□ -1.31
PTPN12-208ENST00000447995 PACS2Q86VP3 889 aa6.87□□□□□ -1.31
PTPN12-208ENST00000447995 SMAPO00193 183 aa6.86□□□□□ -1.31
PTPN12-208ENST00000447995 AMER1Q5JTC6 1135 aaPredicted RBP6.86□□□□□ -1.31
PTPN12-208ENST00000447995 SPRYD3Q8NCJ5 442 aa6.86□□□□□ -1.31
PTPN12-208ENST00000447995 CDCA7LQ96GN5 454 aa6.86□□□□□ -1.31
PTPN12-208ENST00000447995 CDHR5Q9HBB8 845 aa6.86□□□□□ -1.31
PTPN12-208ENST00000447995 PRSS12P56730 875 aa6.85□□□□□ -1.31
PTPN12-208ENST00000447995 E2F4Q16254 413 aa6.85□□□□□ -1.31
PTPN12-208ENST00000447995 NBPF26B4DH59 902 aa6.84□□□□□ -1.31
PTPN12-208ENST00000447995 SAMD7Q7Z3H4 446 aa6.84□□□□□ -1.31
PTPN12-208ENST00000447995 CERKQ8TCT0 537 aa6.83□□□□□ -1.32
PTPN12-208ENST00000447995 NACADO15069 1562 aa6.82□□□□□ -1.32
PTPN12-208ENST00000447995 GRXCR2A6NFK2 248 aa6.82□□□□□ -1.32
PTPN12-208ENST00000447995 OSBPP22059 807 aa6.82□□□□□ -1.32
PTPN12-208ENST00000447995 PPP4CP60510 307 aa6.82□□□□□ -1.32
PTPN12-208ENST00000447995 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.82□□□□□ -1.32
PTPN12-208ENST00000447995 RBM27Q9P2N5 1060 aaKnown RBP6.82□□□□□ -1.32
PTPN12-208ENST00000447995 PNMA3Q9UL41 463 aa6.82□□□□□ -1.32
PTPN12-208ENST00000447995 TJAP1Q5JTD0 557 aa6.81□□□□□ -1.32
PTPN12-208ENST00000447995 TATDN2Q93075 761 aa6.81□□□□□ -1.32
PTPN12-208ENST00000447995 MTRQ99707 1265 aa6.8□□□□□ -1.32
PTPN12-208ENST00000447995 ABCC9O60706 1549 aa6.8□□□□□ -1.32
PTPN12-208ENST00000447995 PAXIP1Q6ZW49 1069 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-208ENST00000447995 TTC13Q8NBP0 860 aa6.79□□□□□ -1.32
PTPN12-208ENST00000447995 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
PTPN12-208ENST00000447995 Q6ZNB5 142 aa6.78□□□□□ -1.32
PTPN12-208ENST00000447995 NUDT18Q6ZVK8 323 aa6.78□□□□□ -1.32
PTPN12-208ENST00000447995 SCRIBQ14160 1630 aa6.77□□□□□ -1.33
PTPN12-208ENST00000447995 LCE2BO14633 110 aa6.77□□□□□ -1.33
PTPN12-208ENST00000447995 PADI6Q6TGC4 694 aa6.77□□□□□ -1.33
PTPN12-208ENST00000447995 IL21Q9HBE4 155 aa6.77□□□□□ -1.33
PTPN12-208ENST00000447995 WDR70Q9NW82 654 aa6.77□□□□□ -1.33
PTPN12-208ENST00000447995 RNF40O75150 1001 aa6.76□□□□□ -1.33
PTPN12-208ENST00000447995 APLP1P51693 650 aa6.76□□□□□ -1.33
PTPN12-208ENST00000447995 NPDC1Q9NQX5 325 aaPredicted RBP6.76□□□□□ -1.33
PTPN12-208ENST00000447995 SWT1Q5T5J6 900 aaKnown RBP6.74□□□□□ -1.33
PTPN12-208ENST00000447995 ZNF516Q92618 1163 aa6.74□□□□□ -1.33
PTPN12-208ENST00000447995 LAPTM4AQ15012 233 aa6.73□□□□□ -1.33
PTPN12-208ENST00000447995 PPP1R18Q6NYC8 613 aa6.73□□□□□ -1.33
PTPN12-208ENST00000447995 PRKD2Q9BZL6 878 aa6.73□□□□□ -1.33
PTPN12-208ENST00000447995 RB1CC1Q8TDY2 1594 aa6.73□□□□□ -1.33
PTPN12-208ENST00000447995 SLF2Q8IX21 1173 aa6.71□□□□□ -1.34
PTPN12-208ENST00000447995 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.71□□□□□ -1.34
PTPN12-208ENST00000447995 NRG2O14511 850 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-208ENST00000447995 GFRA3O60609 400 aa6.7□□□□□ -1.34
PTPN12-208ENST00000447995 MLLT3P42568 568 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-208ENST00000447995 NKX2-3Q8TAU0 364 aa6.7□□□□□ -1.34
PTPN12-208ENST00000447995 EYA1Q99502 592 aa6.7□□□□□ -1.34
PTPN12-208ENST00000447995 V9GY48 417 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-208ENST00000447995 RSF1Q96T23 1441 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-208ENST00000447995 COPS2P61201 443 aa6.69□□□□□ -1.34
PTPN12-208ENST00000447995 NECTIN2Q92692 538 aa6.69□□□□□ -1.34
PTPN12-208ENST00000447995 HDGFP51858 240 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms