RNA–Protein interactions for RNA: ENST00000447470.1

CDRT15P2-201, Transcript of CMT1A duplicated region transcript 15 pseudogene 2, humanhuman

BASIC

Gene CDRT15P2, Length 416 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15P2-201ENST00000447470 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
CDRT15P2-201ENST00000447470 HNRNPMP52272 730 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDRT15P2-201ENST00000447470 EFCAB2Q5VUJ9 269 aa16.42■□□□□ 0.22
CDRT15P2-201ENST00000447470 FBXO41Q8TF61 875 aa16.42■□□□□ 0.22
CDRT15P2-201ENST00000447470 KDM5CP41229 1560 aa16.42■□□□□ 0.22
CDRT15P2-201ENST00000447470 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
CDRT15P2-201ENST00000447470 MLECQ14165 292 aa16.41■□□□□ 0.22
CDRT15P2-201ENST00000447470 ATP10AO60312 1499 aa16.41■□□□□ 0.22
CDRT15P2-201ENST00000447470 FER1L4A9Z1Z3 1794 aa16.41■□□□□ 0.22
CDRT15P2-201ENST00000447470 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
CDRT15P2-201ENST00000447470 SYCP2Q9BX26 1530 aa16.38■□□□□ 0.21
CDRT15P2-201ENST00000447470 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
CDRT15P2-201ENST00000447470 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
CDRT15P2-201ENST00000447470 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
CDRT15P2-201ENST00000447470 NUP155O75694 1391 aa16.37■□□□□ 0.21
CDRT15P2-201ENST00000447470 ABCA6Q8N139 1617 aa16.35■□□□□ 0.21
CDRT15P2-201ENST00000447470 L3MBTL2Q969R5 705 aa16.35■□□□□ 0.21
CDRT15P2-201ENST00000447470 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
CDRT15P2-201ENST00000447470 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
CDRT15P2-201ENST00000447470 CEBPAP49715 358 aaPredicted RBP16.34■□□□□ 0.21
CDRT15P2-201ENST00000447470 PKD2Q13563 968 aa16.34■□□□□ 0.21
CDRT15P2-201ENST00000447470 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
CDRT15P2-201ENST00000447470 ABCC1P33527 1531 aa16.34■□□□□ 0.21
CDRT15P2-201ENST00000447470 FOXD1Q16676 465 aa16.32■□□□□ 0.2
CDRT15P2-201ENST00000447470 ERBINQ96RT1 1412 aa16.32■□□□□ 0.2
CDRT15P2-201ENST00000447470 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
CDRT15P2-201ENST00000447470 REREQ9P2R6 1566 aa16.31■□□□□ 0.2
CDRT15P2-201ENST00000447470 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
CDRT15P2-201ENST00000447470 UNC13BO14795 1591 aa16.29■□□□□ 0.2
CDRT15P2-201ENST00000447470 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDRT15P2-201ENST00000447470 STRCQ7RTU9 1775 aa16.28■□□□□ 0.2
CDRT15P2-201ENST00000447470 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
CDRT15P2-201ENST00000447470 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
CDRT15P2-201ENST00000447470 AGLP35573 1532 aa16.26■□□□□ 0.19
CDRT15P2-201ENST00000447470 FAM135AQ9P2D6 1515 aa16.26■□□□□ 0.19
CDRT15P2-201ENST00000447470 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
CDRT15P2-201ENST00000447470 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
CDRT15P2-201ENST00000447470 C3P01024 1663 aa16.24■□□□□ 0.19
CDRT15P2-201ENST00000447470 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
CDRT15P2-201ENST00000447470 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
CDRT15P2-201ENST00000447470 CERKQ8TCT0 537 aa16.23■□□□□ 0.19
CDRT15P2-201ENST00000447470 IQGAP3Q86VI3 1631 aa16.21■□□□□ 0.19
CDRT15P2-201ENST00000447470 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.19
CDRT15P2-201ENST00000447470 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
CDRT15P2-201ENST00000447470 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
CDRT15P2-201ENST00000447470 ANP32CO43423 234 aa16.17■□□□□ 0.18
CDRT15P2-201ENST00000447470 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
CDRT15P2-201ENST00000447470 SETD1BQ9UPS6 1966 aaKnown RBP16.16■□□□□ 0.18
CDRT15P2-201ENST00000447470 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
CDRT15P2-201ENST00000447470 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
CDRT15P2-201ENST00000447470 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
CDRT15P2-201ENST00000447470 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
CDRT15P2-201ENST00000447470 WASHC2AQ641Q2 1341 aa16.14■□□□□ 0.17
CDRT15P2-201ENST00000447470 ATP7AQ04656 1500 aa16.14■□□□□ 0.17
CDRT15P2-201ENST00000447470 LTBP4Q8N2S1 1624 aa16.13■□□□□ 0.17
CDRT15P2-201ENST00000447470 YTHDC1Q96MU7 727 aaKnown RBP16.13■□□□□ 0.17
CDRT15P2-201ENST00000447470 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
CDRT15P2-201ENST00000447470 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
CDRT15P2-201ENST00000447470 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
CDRT15P2-201ENST00000447470 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
CDRT15P2-201ENST00000447470 PTPRTO14522 1441 aa16.11■□□□□ 0.17
CDRT15P2-201ENST00000447470 KANK1Q14678 1352 aa16.11■□□□□ 0.17
CDRT15P2-201ENST00000447470 EIF2AK4Q9P2K8 1649 aaKnown RBP16.1■□□□□ 0.17
CDRT15P2-201ENST00000447470 STAC3Q96MF2 364 aa16.1■□□□□ 0.17
CDRT15P2-201ENST00000447470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDRT15P2-201ENST00000447470 CNTLNQ9NXG0 1405 aa16.1■□□□□ 0.17
CDRT15P2-201ENST00000447470 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
CDRT15P2-201ENST00000447470 MROH2AA6NES4 1674 aa16.09■□□□□ 0.17
CDRT15P2-201ENST00000447470 ZMYM3Q14202 1370 aa16.08■□□□□ 0.16
CDRT15P2-201ENST00000447470 NPATQ14207 1427 aa16.08■□□□□ 0.16
CDRT15P2-201ENST00000447470 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
CDRT15P2-201ENST00000447470 USP47Q96K76 1375 aa16.07■□□□□ 0.16
CDRT15P2-201ENST00000447470 A2MP01023 1474 aa16.07■□□□□ 0.16
CDRT15P2-201ENST00000447470 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
CDRT15P2-201ENST00000447470 CAMSAP1Q5T5Y3 1602 aa16.05■□□□□ 0.16
CDRT15P2-201ENST00000447470 PRAG1Q86YV5 1406 aa16.05■□□□□ 0.16
CDRT15P2-201ENST00000447470 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
CDRT15P2-201ENST00000447470 DCAF11Q8TEB1 546 aa16.04■□□□□ 0.16
CDRT15P2-201ENST00000447470 MYO3AQ8NEV4 1616 aa16.04■□□□□ 0.16
CDRT15P2-201ENST00000447470 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
CDRT15P2-201ENST00000447470 ROCK2O75116 1388 aaKnown RBP16.03■□□□□ 0.16
CDRT15P2-201ENST00000447470 ZNF142P52746 1687 aaPredicted RBP16.03■□□□□ 0.16
CDRT15P2-201ENST00000447470 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
CDRT15P2-201ENST00000447470 NEURL4Q96JN8 1562 aa16.03■□□□□ 0.16
CDRT15P2-201ENST00000447470 TRPM2O94759 1503 aa16.03■□□□□ 0.16
CDRT15P2-201ENST00000447470 KIF7Q2M1P5 1343 aa16.02■□□□□ 0.16
CDRT15P2-201ENST00000447470 CARD11Q9BXL7 1154 aa16.02■□□□□ 0.16
CDRT15P2-201ENST00000447470 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
CDRT15P2-201ENST00000447470 TET3O43151 1660 aa16.02■□□□□ 0.15
CDRT15P2-201ENST00000447470 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
CDRT15P2-201ENST00000447470 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
CDRT15P2-201ENST00000447470 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
CDRT15P2-201ENST00000447470 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
CDRT15P2-201ENST00000447470 ILDR2Q71H61 639 aa16■□□□□ 0.15
CDRT15P2-201ENST00000447470 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
CDRT15P2-201ENST00000447470 CEP170BQ9Y4F5 1589 aaPredicted RBP16■□□□□ 0.15
CDRT15P2-201ENST00000447470 LAMC1P11047 1609 aa15.99■□□□□ 0.15
CDRT15P2-201ENST00000447470 KIF3BO15066 747 aa15.99■□□□□ 0.15
CDRT15P2-201ENST00000447470 POLR1AO95602 1720 aaPredicted RBP15.98■□□□□ 0.15
CDRT15P2-201ENST00000447470 ZNF335Q9H4Z2 1342 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms