RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ARID4BQ4LE39 1312 aaPredicted RBP6.11□□□□□ -1.43
PMS1-215ENST00000447232 IQGAP2Q13576 1575 aa6.1□□□□□ -1.43
PMS1-215ENST00000447232 RAPGEF3O95398 923 aa6.1□□□□□ -1.43
PMS1-215ENST00000447232 IGF1RP08069 1367 aa6.1□□□□□ -1.43
PMS1-215ENST00000447232 IRX5P78411 483 aaPredicted RBP6.1□□□□□ -1.43
PMS1-215ENST00000447232 SCUBE2Q9NQ36 999 aa6.09□□□□□ -1.43
PMS1-215ENST00000447232 SIGLEC1Q9BZZ2 1709 aa6.09□□□□□ -1.43
PMS1-215ENST00000447232 KCNH8Q96L42 1107 aa6.08□□□□□ -1.44
PMS1-215ENST00000447232 FER1L4A9Z1Z3 1794 aa6.08□□□□□ -1.44
PMS1-215ENST00000447232 NEO1Q92859 1461 aa6.08□□□□□ -1.44
PMS1-215ENST00000447232 POGZQ7Z3K3 1410 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 FANCAO15360 1455 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 UGGT2Q9NYU1 1516 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 KIAA0556O60303 1618 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 ABCA9Q8IUA7 1624 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 PLCG2P16885 1265 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 PSEN1P49768 467 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 OCEL1Q9H607 264 aa6.07□□□□□ -1.44
PMS1-215ENST00000447232 UBAP1LF5GYI3 381 aa6.05□□□□□ -1.44
PMS1-215ENST00000447232 RICTORQ6R327 1708 aa6.05□□□□□ -1.44
PMS1-215ENST00000447232 ABCA8O94911 1581 aa6.05□□□□□ -1.44
PMS1-215ENST00000447232 ARHGEF12Q9NZN5 1544 aa6.05□□□□□ -1.44
PMS1-215ENST00000447232 PDAP1Q13442 181 aaKnown RBP6.05□□□□□ -1.44
PMS1-215ENST00000447232 SETD1BQ9UPS6 1966 aaKnown RBP6.04□□□□□ -1.44
PMS1-215ENST00000447232 UHRF1BP1Q6BDS2 1440 aa6.04□□□□□ -1.44
PMS1-215ENST00000447232 HSPA1LP34931 641 aa6.04□□□□□ -1.44
PMS1-215ENST00000447232 FHOD3Q2V2M9 1422 aa6.03□□□□□ -1.44
PMS1-215ENST00000447232 AKNAQ7Z591 1439 aa6.03□□□□□ -1.44
PMS1-215ENST00000447232 ZMYM4Q5VZL5 1548 aa6.03□□□□□ -1.44
PMS1-215ENST00000447232 CARMIL1Q5VZK9 1371 aa6.03□□□□□ -1.44
PMS1-215ENST00000447232 PDCD7Q8N8D1 485 aaKnown RBP6.03□□□□□ -1.44
PMS1-215ENST00000447232 MKRN3Q13064 507 aaKnown RBP6.02□□□□□ -1.45
PMS1-215ENST00000447232 NCOA1Q15788 1441 aa6.02□□□□□ -1.45
PMS1-215ENST00000447232 KIF27Q86VH2 1401 aa6.02□□□□□ -1.45
PMS1-215ENST00000447232 GOLGA2Q08379 1002 aa6.02□□□□□ -1.45
PMS1-215ENST00000447232 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
PMS1-215ENST00000447232 DENND4BO75064 1496 aaPredicted RBP6.01□□□□□ -1.45
PMS1-215ENST00000447232 CEBPAP49715 358 aaPredicted RBP6.01□□□□□ -1.45
PMS1-215ENST00000447232 EFCAB5A4FU69 1503 aa6.01□□□□□ -1.45
PMS1-215ENST00000447232 ZFYVE16Q7Z3T8 1539 aa6.01□□□□□ -1.45
PMS1-215ENST00000447232 POTEMA6NI47 508 aa6□□□□□ -1.45
PMS1-215ENST00000447232 FAM163AQ96GL9 167 aaPredicted RBP6□□□□□ -1.45
PMS1-215ENST00000447232 MAGI2Q86UL8 1455 aa6□□□□□ -1.45
PMS1-215ENST00000447232 MLECQ14165 292 aa6□□□□□ -1.45
PMS1-215ENST00000447232 SLAIN1Q8ND83 568 aa6□□□□□ -1.45
PMS1-215ENST00000447232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6□□□□□ -1.455e-7■■■□□ 15.2
PMS1-215ENST00000447232 ZNF335Q9H4Z2 1342 aaPredicted RBP5.99□□□□□ -1.45
PMS1-215ENST00000447232 POTEGQ6S5H5 508 aa5.99□□□□□ -1.45
PMS1-215ENST00000447232 CABP2Q9NPB3 220 aa5.99□□□□□ -1.45
PMS1-215ENST00000447232 RGS17Q9UGC6 210 aaPredicted RBP5.99□□□□□ -1.45
PMS1-215ENST00000447232 RNF25Q96BH1 459 aaPredicted RBP5.99□□□□□ -1.45
PMS1-215ENST00000447232 ATP10BO94823 1461 aa5.98□□□□□ -1.45
PMS1-215ENST00000447232 HECW1Q76N89 1606 aa5.97□□□□□ -1.45
PMS1-215ENST00000447232 C3P01024 1663 aa5.97□□□□□ -1.45
PMS1-215ENST00000447232 DPY19L2Q6NUT2 758 aa5.96□□□□□ -1.46
PMS1-215ENST00000447232 CAMSAP1Q5T5Y3 1602 aa5.96□□□□□ -1.46
PMS1-215ENST00000447232 RIOK3O14730 519 aaKnown RBP5.96□□□□□ -1.46
PMS1-215ENST00000447232 L3MBTL3Q96JM7 780 aaPredicted RBP5.96□□□□□ -1.46
PMS1-215ENST00000447232 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.96□□□□□ -1.46
PMS1-215ENST00000447232 CFAP74Q9C0B2 1584 aa5.96□□□□□ -1.46
PMS1-215ENST00000447232 ALKQ9UM73 1620 aa5.96□□□□□ -1.46
PMS1-215ENST00000447232 C9orf84Q5VXU9 1444 aa5.95□□□□□ -1.46
PMS1-215ENST00000447232 ATP10AO60312 1499 aa5.95□□□□□ -1.46
PMS1-215ENST00000447232 TRAPPC8Q9Y2L5 1435 aa5.95□□□□□ -1.46
PMS1-215ENST00000447232 PIP4K2BP78356 416 aa5.95□□□□□ -1.46
PMS1-215ENST00000447232 GOLGA3Q08378 1498 aa5.95□□□□□ -1.46
PMS1-215ENST00000447232 TOM1O60784 492 aa5.94□□□□□ -1.46
PMS1-215ENST00000447232 EFCAB3Q8N7B9 438 aa5.94□□□□□ -1.46
PMS1-215ENST00000447232 SRCAPQ6ZRS2 3230 aa5.93□□□□□ -1.46
PMS1-215ENST00000447232 PLA2R1Q13018 1463 aa5.93□□□□□ -1.46
PMS1-215ENST00000447232 TCOF1Q13428 1488 aaKnown RBP5.93□□□□□ -1.46
PMS1-215ENST00000447232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.93□□□□□ -1.46
PMS1-215ENST00000447232 ZFP91Q96JP5 570 aaPredicted RBP5.93□□□□□ -1.46
PMS1-215ENST00000447232 RAPGEF2Q9Y4G8 1499 aa5.92□□□□□ -1.46
PMS1-215ENST00000447232 NCKAP5LQ9HCH0 1330 aa5.92□□□□□ -1.46
PMS1-215ENST00000447232 VGFO15240 615 aaPredicted RBP5.92□□□□□ -1.46
PMS1-215ENST00000447232 ST18O60284 1047 aa5.92□□□□□ -1.46
PMS1-215ENST00000447232 SETD1AO15047 1707 aaKnown RBP5.92□□□□□ -1.46
PMS1-215ENST00000447232 ARID3CA6NKF2 412 aa5.92□□□□□ -1.46
PMS1-215ENST00000447232 POTEAQ6S8J7 498 aa5.92□□□□□ -1.46
PMS1-215ENST00000447232 C3orf67Q6ZVT6 689 aa5.92□□□□□ -1.46
PMS1-215ENST00000447232 CPS1P31327 1500 aa5.92□□□□□ -1.46
PMS1-215ENST00000447232 PKD2Q13563 968 aa5.91□□□□□ -1.46
PMS1-215ENST00000447232 CTTNBP2Q8WZ74 1663 aa5.91□□□□□ -1.46
PMS1-215ENST00000447232 REREQ9P2R6 1566 aa5.9□□□□□ -1.46
PMS1-215ENST00000447232 BOLA1Q9Y3E2 137 aa5.9□□□□□ -1.46
PMS1-215ENST00000447232 NPATQ14207 1427 aa5.9□□□□□ -1.46
PMS1-215ENST00000447232 PTPRKQ15262 1439 aa5.9□□□□□ -1.46
PMS1-215ENST00000447232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.9□□□□□ -1.47
PMS1-215ENST00000447232 ZNF142P52746 1687 aaPredicted RBP5.9□□□□□ -1.47
PMS1-215ENST00000447232 AGLP35573 1532 aa5.89□□□□□ -1.47
PMS1-215ENST00000447232 SCAPERQ9BY12 1400 aa5.89□□□□□ -1.47
PMS1-215ENST00000447232 SOX12O15370 315 aa5.88□□□□□ -1.47
PMS1-215ENST00000447232 ECM2O94769 699 aaPredicted RBP5.88□□□□□ -1.47
PMS1-215ENST00000447232 TMEM121BQ9BXQ6 578 aaPredicted RBP5.88□□□□□ -1.47
PMS1-215ENST00000447232 SNPHO15079 494 aa5.88□□□□□ -1.47
PMS1-215ENST00000447232 UPF1Q92900 1129 aaKnown RBP eCLIP5.88□□□□□ -1.47
PMS1-215ENST00000447232 SHANK2Q9UPX8 1470 aa5.88□□□□□ -1.47
PMS1-215ENST00000447232 DIP2CQ9Y2E4 1556 aa5.88□□□□□ -1.47
PMS1-215ENST00000447232 RAPGEF6Q8TEU7 1601 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms