RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 ABCC5O15440 1437 aa14.82□□□□□ -0.04
PTCH2-203ENST00000447098 USP47Q96K76 1375 aa14.82□□□□□ -0.04
PTCH2-203ENST00000447098 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
PTCH2-203ENST00000447098 EIF5BO60841 1220 aaKnown RBP14.81□□□□□ -0.04
PTCH2-203ENST00000447098 TMEM132EQ6IEE7 984 aa14.8□□□□□ -0.04
PTCH2-203ENST00000447098 CAMSAP2Q08AD1 1489 aa14.8□□□□□ -0.04
PTCH2-203ENST00000447098 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
PTCH2-203ENST00000447098 PTPRKQ15262 1439 aa14.8□□□□□ -0.04
PTCH2-203ENST00000447098 ABCA5Q8WWZ7 1642 aa14.8□□□□□ -0.04
PTCH2-203ENST00000447098 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
PTCH2-203ENST00000447098 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
PTCH2-203ENST00000447098 HDGFP51858 240 aaKnown RBP14.79□□□□□ -0.04
PTCH2-203ENST00000447098 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
PTCH2-203ENST00000447098 CTTNBP2Q8WZ74 1663 aa14.79□□□□□ -0.04
PTCH2-203ENST00000447098 CNTLNQ9NXG0 1405 aa14.78□□□□□ -0.04
PTCH2-203ENST00000447098 MORC1Q86VD1 984 aa14.78□□□□□ -0.04
PTCH2-203ENST00000447098 TARBP1Q13395 1621 aaKnown RBP14.78□□□□□ -0.04
PTCH2-203ENST00000447098 CFAP53Q96M91 514 aa14.77□□□□□ -0.04
PTCH2-203ENST00000447098 MAP3K1Q13233 1512 aa14.77□□□□□ -0.05
PTCH2-203ENST00000447098 A0A0G2JS52 829 aa14.77□□□□□ -0.05
PTCH2-203ENST00000447098 CD109Q6YHK3 1445 aa14.76□□□□□ -0.05
PTCH2-203ENST00000447098 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
PTCH2-203ENST00000447098 MINK1Q8N4C8 1332 aaPredicted RBP14.75□□□□□ -0.05
PTCH2-203ENST00000447098 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
PTCH2-203ENST00000447098 PANK3Q9H999 370 aa14.75□□□□□ -0.05
PTCH2-203ENST00000447098 PBRM1Q86U86 1689 aa14.75□□□□□ -0.05
PTCH2-203ENST00000447098 GPATCH8Q9UKJ3 1502 aaKnown RBP14.75□□□□□ -0.05
PTCH2-203ENST00000447098 RAPGEF6Q8TEU7 1601 aa14.74□□□□□ -0.05
PTCH2-203ENST00000447098 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
PTCH2-203ENST00000447098 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
PTCH2-203ENST00000447098 UGGT2Q9NYU1 1516 aa14.74□□□□□ -0.05
PTCH2-203ENST00000447098 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
PTCH2-203ENST00000447098 VGFO15240 615 aaPredicted RBP14.73□□□□□ -0.05
PTCH2-203ENST00000447098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
PTCH2-203ENST00000447098 NUP160Q12769 1436 aa14.73□□□□□ -0.05
PTCH2-203ENST00000447098 NCOA1Q15788 1441 aa14.72□□□□□ -0.05
PTCH2-203ENST00000447098 KIF14Q15058 1648 aa14.72□□□□□ -0.05
PTCH2-203ENST00000447098 IL27Q8NEV9 243 aa14.72□□□□□ -0.05
PTCH2-203ENST00000447098 KTN1Q86UP2 1357 aaKnown RBP14.72□□□□□ -0.05
PTCH2-203ENST00000447098 AKNAQ7Z591 1439 aa14.72□□□□□ -0.05
PTCH2-203ENST00000447098 KIAA1107Q9UPP5 1409 aa14.72□□□□□ -0.05
PTCH2-203ENST00000447098 EID1Q9Y6B2 187 aa14.72□□□□□ -0.05
PTCH2-203ENST00000447098 CCDC141Q6ZP82 1450 aa14.72□□□□□ -0.05
PTCH2-203ENST00000447098 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
PTCH2-203ENST00000447098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.05
PTCH2-203ENST00000447098 KIF7Q2M1P5 1343 aa14.71□□□□□ -0.05
PTCH2-203ENST00000447098 ADGRL1O94910 1474 aa14.69□□□□□ -0.06
PTCH2-203ENST00000447098 PLEKHH2Q8IVE3 1493 aa14.69□□□□□ -0.06
PTCH2-203ENST00000447098 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
PTCH2-203ENST00000447098 TCERG1O14776 1098 aaKnown RBP14.68□□□□□ -0.06
PTCH2-203ENST00000447098 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
PTCH2-203ENST00000447098 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
PTCH2-203ENST00000447098 HDGFL2Q7Z4V5 671 aaPredicted RBP14.67□□□□□ -0.06
PTCH2-203ENST00000447098 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
PTCH2-203ENST00000447098 EIF3AQ14152 1382 aaKnown RBP14.67□□□□□ -0.06
PTCH2-203ENST00000447098 ASXL2Q76L83 1435 aa14.67□□□□□ -0.06
PTCH2-203ENST00000447098 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
PTCH2-203ENST00000447098 FANCAO15360 1455 aa14.66□□□□□ -0.06
PTCH2-203ENST00000447098 CCDC146Q8IYE0 955 aa14.66□□□□□ -0.06
PTCH2-203ENST00000447098 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
PTCH2-203ENST00000447098 PDE4AP27815 886 aa14.65□□□□□ -0.06
PTCH2-203ENST00000447098 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTCH2-203ENST00000447098 USP35Q9P2H5 1018 aa14.64□□□□□ -0.07
PTCH2-203ENST00000447098 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
PTCH2-203ENST00000447098 FBXO31Q5XUX0 539 aaPredicted RBP14.63□□□□□ -0.07
PTCH2-203ENST00000447098 FRAT1Q92837 279 aaPredicted RBP14.63□□□□□ -0.07
PTCH2-203ENST00000447098 RCAN3Q9UKA8 241 aa14.63□□□□□ -0.07
PTCH2-203ENST00000447098 ANKRD30BQ9BXX2 1392 aa14.63□□□□□ -0.07
PTCH2-203ENST00000447098 SMG6Q86US8 1419 aaKnown RBP14.62□□□□□ -0.07
PTCH2-203ENST00000447098 RALBP1Q15311 655 aa14.62□□□□□ -0.07
PTCH2-203ENST00000447098 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.61□□□□□ -0.07
PTCH2-203ENST00000447098 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
PTCH2-203ENST00000447098 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
PTCH2-203ENST00000447098 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
PTCH2-203ENST00000447098 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
PTCH2-203ENST00000447098 CEBPAP49715 358 aaPredicted RBP14.6□□□□□ -0.07
PTCH2-203ENST00000447098 TRAPPC8Q9Y2L5 1435 aa14.6□□□□□ -0.07
PTCH2-203ENST00000447098 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
PTCH2-203ENST00000447098 TERF2IPQ9NYB0 399 aa14.6□□□□□ -0.07
PTCH2-203ENST00000447098 MAGI3Q5TCQ9 1506 aa14.59□□□□□ -0.07
PTCH2-203ENST00000447098 SYCP2Q9BX26 1530 aa14.59□□□□□ -0.07
PTCH2-203ENST00000447098 RRP7AQ9Y3A4 280 aaKnown RBP14.58□□□□□ -0.08
PTCH2-203ENST00000447098 SLC26A8Q96RN1 970 aa14.58□□□□□ -0.08
PTCH2-203ENST00000447098 PLCH2O75038 1416 aa14.57□□□□□ -0.08
PTCH2-203ENST00000447098 EVC2Q86UK5 1308 aa14.57□□□□□ -0.08
PTCH2-203ENST00000447098 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
PTCH2-203ENST00000447098 LTV1Q96GA3 475 aaPredicted RBP14.56□□□□□ -0.08
PTCH2-203ENST00000447098 TXNDC2Q86VQ3 553 aa14.56□□□□□ -0.08
PTCH2-203ENST00000447098 ERBINQ96RT1 1412 aa14.55□□□□□ -0.08
PTCH2-203ENST00000447098 WDR7Q9Y4E6 1490 aa14.55□□□□□ -0.08
PTCH2-203ENST00000447098 CFAP43Q8NDM7 1665 aa14.55□□□□□ -0.08
PTCH2-203ENST00000447098 GSE1Q14687 1217 aa14.54□□□□□ -0.08
PTCH2-203ENST00000447098 SLC4A3P48751 1232 aa14.54□□□□□ -0.08
PTCH2-203ENST00000447098 IDI1Q13907 227 aa14.54□□□□□ -0.08
PTCH2-203ENST00000447098 PRAM1Q96QH2 718 aa14.54□□□□□ -0.08
PTCH2-203ENST00000447098 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
PTCH2-203ENST00000447098 GGNBP2Q9H3C7 697 aa14.53□□□□□ -0.08
PTCH2-203ENST00000447098 MYBBP1AQ9BQG0 1328 aaKnown RBP14.53□□□□□ -0.08
PTCH2-203ENST00000447098 MS4A1P11836 297 aa14.53□□□□□ -0.08
PTCH2-203ENST00000447098 BRPF3Q9ULD4 1205 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms