RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 PHF14O94880 888 aa15.68■□□□□ 0.1
SMARCE1-206ENST00000447024 TYW1BQ6NUM6 668 aa15.68■□□□□ 0.1
SMARCE1-206ENST00000447024 COL9A1P20849 921 aa15.66■□□□□ 0.1
SMARCE1-206ENST00000447024 FBXW7Q969H0 707 aa15.66■□□□□ 0.1
SMARCE1-206ENST00000447024 PROX2Q3B8N5 592 aa15.65■□□□□ 0.1
SMARCE1-206ENST00000447024 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
SMARCE1-206ENST00000447024 DPYSL4O14531 572 aa15.64■□□□□ 0.09
SMARCE1-206ENST00000447024 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
SMARCE1-206ENST00000447024 BBXQ8WY36 941 aaPredicted RBP15.63■□□□□ 0.09
SMARCE1-206ENST00000447024 RABGEF1Q9UJ41 708 aa15.62■□□□□ 0.09
SMARCE1-206ENST00000447024 EPAS1Q99814 870 aa15.58■□□□□ 0.08
SMARCE1-206ENST00000447024 IFFO2Q5TF58 517 aa15.55■□□□□ 0.08
SMARCE1-206ENST00000447024 C6orf132Q5T0Z8 1188 aa15.54■□□□□ 0.08
SMARCE1-206ENST00000447024 ANKK1Q8NFD2 765 aa15.52■□□□□ 0.08
SMARCE1-206ENST00000447024 DDX12PQ92771 950 aa15.51■□□□□ 0.07
SMARCE1-206ENST00000447024 KIAA1468Q9P260 1216 aa15.51■□□□□ 0.07
SMARCE1-206ENST00000447024 LAPTM4BQ86VI4 370 aa15.5■□□□□ 0.07
SMARCE1-206ENST00000447024 RBM33Q96EV2 1170 aaKnown RBP15.5■□□□□ 0.07
SMARCE1-206ENST00000447024 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
SMARCE1-206ENST00000447024 BCAMP50895 628 aa15.47■□□□□ 0.07
SMARCE1-206ENST00000447024 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
SMARCE1-206ENST00000447024 A0A0G2JS52 829 aa15.45■□□□□ 0.06
SMARCE1-206ENST00000447024 TRIM6-TRIM34B2RNG4 842 aa15.45■□□□□ 0.06
SMARCE1-206ENST00000447024 PDIA6Q15084 440 aa15.45■□□□□ 0.06
SMARCE1-206ENST00000447024 ZFRQ96KR1 1074 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-206ENST00000447024 SEPT9Q9UHD8 586 aaPredicted RBP15.45■□□□□ 0.06
SMARCE1-206ENST00000447024 SOWAHBA6NEL2 793 aa15.44■□□□□ 0.06
SMARCE1-206ENST00000447024 NBR1Q14596 966 aa15.43■□□□□ 0.06
SMARCE1-206ENST00000447024 EN1Q05925 392 aaPredicted RBP15.41■□□□□ 0.06
SMARCE1-206ENST00000447024 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
SMARCE1-206ENST00000447024 RGS20O76081 388 aa15.4■□□□□ 0.06
SMARCE1-206ENST00000447024 TSR1Q2NL82 804 aaKnown RBP15.39■□□□□ 0.05
SMARCE1-206ENST00000447024 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
SMARCE1-206ENST00000447024 MAP3K7O43318 606 aa15.38■□□□□ 0.05
SMARCE1-206ENST00000447024 SPDYE16A6NNV3 312 aaPredicted RBP15.37■□□□□ 0.05
SMARCE1-206ENST00000447024 ITGBL1O95965 494 aaPredicted RBP15.37■□□□□ 0.05
SMARCE1-206ENST00000447024 FAM98CQ17RN3 349 aaKnown RBP15.37■□□□□ 0.05
SMARCE1-206ENST00000447024 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
SMARCE1-206ENST00000447024 WBP1LQ9NX94 342 aa15.35■□□□□ 0.05
SMARCE1-206ENST00000447024 E2F4Q16254 413 aa15.34■□□□□ 0.05
SMARCE1-206ENST00000447024 NYAP1Q6ZVC0 841 aa15.34■□□□□ 0.05
SMARCE1-206ENST00000447024 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
SMARCE1-206ENST00000447024 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
SMARCE1-206ENST00000447024 PAXIP1Q6ZW49 1069 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-206ENST00000447024 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-206ENST00000447024 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
SMARCE1-206ENST00000447024 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
SMARCE1-206ENST00000447024 PACS2Q86VP3 889 aa15.29■□□□□ 0.04
SMARCE1-206ENST00000447024 LRCH3Q96II8 777 aa15.29■□□□□ 0.04
SMARCE1-206ENST00000447024 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-206ENST00000447024 ARIH1Q9Y4X5 557 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-206ENST00000447024 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
SMARCE1-206ENST00000447024 TSR3Q9UJK0 312 aaKnown RBP15.28■□□□□ 0.04
SMARCE1-206ENST00000447024 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
SMARCE1-206ENST00000447024 WDR70Q9NW82 654 aa15.27■□□□□ 0.04
SMARCE1-206ENST00000447024 GRXCR2A6NFK2 248 aa15.25■□□□□ 0.03
SMARCE1-206ENST00000447024 CDCA7LQ96GN5 454 aa15.25■□□□□ 0.03
SMARCE1-206ENST00000447024 IRX2Q9BZI1 471 aaPredicted RBP15.24■□□□□ 0.03
SMARCE1-206ENST00000447024 FAM198AQ9UFP1 575 aa15.23■□□□□ 0.03
SMARCE1-206ENST00000447024 PRSS12P56730 875 aa15.22■□□□□ 0.03
SMARCE1-206ENST00000447024 KCNC4Q03721 635 aa15.22■□□□□ 0.03
SMARCE1-206ENST00000447024 SMAPO00193 183 aa15.21■□□□□ 0.03
SMARCE1-206ENST00000447024 CERKQ8TCT0 537 aa15.2■□□□□ 0.02
SMARCE1-206ENST00000447024 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
SMARCE1-206ENST00000447024 CDHR5Q9HBB8 845 aa15.18■□□□□ 0.02
SMARCE1-206ENST00000447024 C3orf80F5H4A9 247 aa15.17■□□□□ 0.02
SMARCE1-206ENST00000447024 OSBPP22059 807 aa15.17■□□□□ 0.02
SMARCE1-206ENST00000447024 SAMD7Q7Z3H4 446 aa15.16■□□□□ 0.02
SMARCE1-206ENST00000447024 NBPF26B4DH59 902 aa15.15■□□□□ 0.02
SMARCE1-206ENST00000447024 PPP4CP60510 307 aa15.14■□□□□ 0.01
SMARCE1-206ENST00000447024 TATDN2Q93075 761 aa15.14■□□□□ 0.01
SMARCE1-206ENST00000447024 PNMA3Q9UL41 463 aa15.14■□□□□ 0.01
SMARCE1-206ENST00000447024 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
SMARCE1-206ENST00000447024 NUDT18Q6ZVK8 323 aa15.07■□□□□ 0
SMARCE1-206ENST00000447024 TJAP1Q5JTD0 557 aa15.05■□□□□ -0
SMARCE1-206ENST00000447024 PADI6Q6TGC4 694 aa15.02■□□□□ -0
SMARCE1-206ENST00000447024 TTC13Q8NBP0 860 aa15.02■□□□□ -0
SMARCE1-206ENST00000447024 NPDC1Q9NQX5 325 aaPredicted RBP15.02■□□□□ -0
SMARCE1-206ENST00000447024 RNF40O75150 1001 aa15.01□□□□□ -0.01
SMARCE1-206ENST00000447024 MTRQ99707 1265 aa15.01□□□□□ -0.01
SMARCE1-206ENST00000447024 HDGFP51858 240 aaKnown RBP14.98□□□□□ -0.01
SMARCE1-206ENST00000447024 IL21Q9HBE4 155 aa14.97□□□□□ -0.01
SMARCE1-206ENST00000447024 APLP1P51693 650 aa14.96□□□□□ -0.01
SMARCE1-206ENST00000447024 MLLT3P42568 568 aaPredicted RBP14.94□□□□□ -0.02
SMARCE1-206ENST00000447024 SWT1Q5T5J6 900 aaKnown RBP14.94□□□□□ -0.02
SMARCE1-206ENST00000447024 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
SMARCE1-206ENST00000447024 Q6ZNB5 142 aa14.93□□□□□ -0.02
SMARCE1-206ENST00000447024 ARHGEF1Q92888 912 aaKnown RBP14.93□□□□□ -0.02
SMARCE1-206ENST00000447024 KCNV2Q8TDN2 545 aa14.92□□□□□ -0.02
SMARCE1-206ENST00000447024 ZNF516Q92618 1163 aa14.92□□□□□ -0.02
SMARCE1-206ENST00000447024 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-206ENST00000447024 PPP1R18Q6NYC8 613 aa14.89□□□□□ -0.03
SMARCE1-206ENST00000447024 SLF2Q8IX21 1173 aa14.89□□□□□ -0.03
SMARCE1-206ENST00000447024 EYA1Q99502 592 aa14.89□□□□□ -0.03
SMARCE1-206ENST00000447024 NECTIN2Q92692 538 aa14.88□□□□□ -0.03
SMARCE1-206ENST00000447024 PRKD2Q9BZL6 878 aa14.86□□□□□ -0.03
SMARCE1-206ENST00000447024 CC2D2AQ9P2K1 1620 aa14.85□□□□□ -0.03
SMARCE1-206ENST00000447024 COPS2P61201 443 aa14.83□□□□□ -0.04
SMARCE1-206ENST00000447024 LAPTM4AQ15012 233 aa14.83□□□□□ -0.04
SMARCE1-206ENST00000447024 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms