RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
LINC00440-201ENST00000446579 WNT2BQ93097 391 aa11.02□□□□□ -0.65
LINC00440-201ENST00000446579 PHF14O94880 888 aa11.01□□□□□ -0.65
LINC00440-201ENST00000446579 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
LINC00440-201ENST00000446579 PPP1R3GB7ZBB8 358 aa11□□□□□ -0.65
LINC00440-201ENST00000446579 CAMK2BQ13554 666 aa11□□□□□ -0.65
LINC00440-201ENST00000446579 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
LINC00440-201ENST00000446579 THSD4Q6ZMP0 1018 aa10.99□□□□□ -0.65
LINC00440-201ENST00000446579 COL9A1P20849 921 aa10.98□□□□□ -0.65
LINC00440-201ENST00000446579 DDX12PQ92771 950 aa10.96□□□□□ -0.65
LINC00440-201ENST00000446579 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
LINC00440-201ENST00000446579 EPAS1Q99814 870 aa10.95□□□□□ -0.66
LINC00440-201ENST00000446579 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
LINC00440-201ENST00000446579 RABGEF1Q9UJ41 708 aa10.95□□□□□ -0.66
LINC00440-201ENST00000446579 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
LINC00440-201ENST00000446579 ANKK1Q8NFD2 765 aa10.91□□□□□ -0.66
LINC00440-201ENST00000446579 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
LINC00440-201ENST00000446579 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
LINC00440-201ENST00000446579 NBR1Q14596 966 aa10.89□□□□□ -0.67
LINC00440-201ENST00000446579 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
LINC00440-201ENST00000446579 MAP3K7O43318 606 aa10.87□□□□□ -0.67
LINC00440-201ENST00000446579 SEPT9Q9UHD8 586 aaPredicted RBP10.87□□□□□ -0.67
LINC00440-201ENST00000446579 BCAMP50895 628 aa10.86□□□□□ -0.67
LINC00440-201ENST00000446579 E2F4Q16254 413 aa10.86□□□□□ -0.67
LINC00440-201ENST00000446579 PDIA6Q15084 440 aa10.85□□□□□ -0.67
LINC00440-201ENST00000446579 LAPTM4BQ86VI4 370 aa10.85□□□□□ -0.67
LINC00440-201ENST00000446579 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
LINC00440-201ENST00000446579 TRIM6-TRIM34B2RNG4 842 aa10.84□□□□□ -0.67
LINC00440-201ENST00000446579 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
LINC00440-201ENST00000446579 ONECUT3O60422 494 aaPredicted RBP10.83□□□□□ -0.68
LINC00440-201ENST00000446579 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
LINC00440-201ENST00000446579 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
LINC00440-201ENST00000446579 GRXCR2A6NFK2 248 aa10.82□□□□□ -0.68
LINC00440-201ENST00000446579 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
LINC00440-201ENST00000446579 SOWAHBA6NEL2 793 aa10.81□□□□□ -0.68
LINC00440-201ENST00000446579 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
LINC00440-201ENST00000446579 PACS2Q86VP3 889 aa10.78□□□□□ -0.68
LINC00440-201ENST00000446579 IFFO2Q5TF58 517 aa10.77□□□□□ -0.69
LINC00440-201ENST00000446579 WBP1LQ9NX94 342 aa10.77□□□□□ -0.69
LINC00440-201ENST00000446579 LRCH3Q96II8 777 aa10.76□□□□□ -0.69
LINC00440-201ENST00000446579 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.76□□□□□ -0.69
LINC00440-201ENST00000446579 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
LINC00440-201ENST00000446579 A0A0G2JS52 829 aa10.75□□□□□ -0.69
LINC00440-201ENST00000446579 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
LINC00440-201ENST00000446579 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
LINC00440-201ENST00000446579 SMAPO00193 183 aa10.73□□□□□ -0.69
LINC00440-201ENST00000446579 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
LINC00440-201ENST00000446579 BCANQ96GW7 911 aa10.73□□□□□ -0.69
LINC00440-201ENST00000446579 ARIH1Q9Y4X5 557 aaPredicted RBP10.73□□□□□ -0.69
LINC00440-201ENST00000446579 TSR3Q9UJK0 312 aaKnown RBP10.72□□□□□ -0.69
LINC00440-201ENST00000446579 PRIM1P49642 420 aaKnown RBP10.71□□□□□ -0.69
LINC00440-201ENST00000446579 PRSS12P56730 875 aa10.71□□□□□ -0.69
LINC00440-201ENST00000446579 CERKQ8TCT0 537 aa10.71□□□□□ -0.69
LINC00440-201ENST00000446579 RGS20O76081 388 aa10.7□□□□□ -0.7
LINC00440-201ENST00000446579 ITGBL1O95965 494 aaPredicted RBP10.69□□□□□ -0.7
LINC00440-201ENST00000446579 KCNC4Q03721 635 aa10.69□□□□□ -0.7
LINC00440-201ENST00000446579 PNMA3Q9UL41 463 aa10.69□□□□□ -0.7
LINC00440-201ENST00000446579 PPP4CP60510 307 aa10.68□□□□□ -0.7
LINC00440-201ENST00000446579 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
LINC00440-201ENST00000446579 CDHR5Q9HBB8 845 aa10.68□□□□□ -0.7
LINC00440-201ENST00000446579 OSBPP22059 807 aa10.67□□□□□ -0.7
LINC00440-201ENST00000446579 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
LINC00440-201ENST00000446579 FAM198AQ9UFP1 575 aa10.67□□□□□ -0.7
LINC00440-201ENST00000446579 NBPF26B4DH59 902 aa10.66□□□□□ -0.7
LINC00440-201ENST00000446579 SAMD7Q7Z3H4 446 aa10.66□□□□□ -0.7
LINC00440-201ENST00000446579 TATDN2Q93075 761 aa10.66□□□□□ -0.7
LINC00440-201ENST00000446579 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
LINC00440-201ENST00000446579 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
LINC00440-201ENST00000446579 RNF40O75150 1001 aa10.65□□□□□ -0.7
LINC00440-201ENST00000446579 KCNV2Q8TDN2 545 aa10.65□□□□□ -0.7
LINC00440-201ENST00000446579 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
LINC00440-201ENST00000446579 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
LINC00440-201ENST00000446579 NUDT18Q6ZVK8 323 aa10.62□□□□□ -0.71
LINC00440-201ENST00000446579 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
LINC00440-201ENST00000446579 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
LINC00440-201ENST00000446579 MLLT3P42568 568 aaPredicted RBP10.55□□□□□ -0.72
LINC00440-201ENST00000446579 NPDC1Q9NQX5 325 aaPredicted RBP10.54□□□□□ -0.72
LINC00440-201ENST00000446579 MTRQ99707 1265 aa10.53□□□□□ -0.72
LINC00440-201ENST00000446579 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
LINC00440-201ENST00000446579 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.73
LINC00440-201ENST00000446579 IL21Q9HBE4 155 aa10.51□□□□□ -0.73
LINC00440-201ENST00000446579 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
LINC00440-201ENST00000446579 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
LINC00440-201ENST00000446579 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
LINC00440-201ENST00000446579 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
LINC00440-201ENST00000446579 APLP1P51693 650 aa10.49□□□□□ -0.73
LINC00440-201ENST00000446579 NECTIN2Q92692 538 aa10.48□□□□□ -0.73
LINC00440-201ENST00000446579 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
LINC00440-201ENST00000446579 Q6ZNB5 142 aa10.47□□□□□ -0.73
LINC00440-201ENST00000446579 ZNF516Q92618 1163 aa10.47□□□□□ -0.73
LINC00440-201ENST00000446579 COPS2P61201 443 aa10.46□□□□□ -0.73
LINC00440-201ENST00000446579 SEMA3EO15041 775 aa10.45□□□□□ -0.74
LINC00440-201ENST00000446579 EYA1Q99502 592 aa10.45□□□□□ -0.74
LINC00440-201ENST00000446579 PPP1R18Q6NYC8 613 aa10.44□□□□□ -0.74
LINC00440-201ENST00000446579 PTGDRQ13258 359 aa10.43□□□□□ -0.74
LINC00440-201ENST00000446579 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
LINC00440-201ENST00000446579 SMYD5Q6GMV2 418 aa10.42□□□□□ -0.74
LINC00440-201ENST00000446579 RBM46Q8TBY0 533 aaKnown RBP10.42□□□□□ -0.74
LINC00440-201ENST00000446579 TESPA1A2RU30 521 aaPredicted RBP10.41□□□□□ -0.74
LINC00440-201ENST00000446579 NKX2-3Q8TAU0 364 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms