RNA–Protein interactions for RNA: ENST00000446561.1

SEC23IP-203, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-203ENST00000446561 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
SEC23IP-203ENST00000446561 CDC42BPAQ5VT25 1732 aa9.97□□□□□ -0.81
SEC23IP-203ENST00000446561 GPATCH8Q9UKJ3 1502 aaKnown RBP9.97□□□□□ -0.81
SEC23IP-203ENST00000446561 ARHGEF5Q12774 1597 aa9.97□□□□□ -0.81
SEC23IP-203ENST00000446561 ANKRD50Q9ULJ7 1429 aa9.96□□□□□ -0.82
SEC23IP-203ENST00000446561 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.82
SEC23IP-203ENST00000446561 PPM1GO15355 546 aaPredicted RBP9.95□□□□□ -0.82
SEC23IP-203ENST00000446561 HOXD11P31277 338 aaPredicted RBP9.95□□□□□ -0.82
SEC23IP-203ENST00000446561 DDRGK1Q96HY6 314 aa9.95□□□□□ -0.82
SEC23IP-203ENST00000446561 CFDP1Q9UEE9 299 aaPredicted RBP9.95□□□□□ -0.82
SEC23IP-203ENST00000446561 WASHC2CQ9Y4E1 1318 aa9.95□□□□□ -0.82
SEC23IP-203ENST00000446561 GRIN2AQ12879 1464 aa9.95□□□□□ -0.82
SEC23IP-203ENST00000446561 TRPM1Q7Z4N2 1603 aa9.94□□□□□ -0.82
SEC23IP-203ENST00000446561 RRP1P56182 461 aaKnown RBP9.94□□□□□ -0.82
SEC23IP-203ENST00000446561 MAGI1Q96QZ7 1491 aaPredicted RBP9.93□□□□□ -0.82
SEC23IP-203ENST00000446561 CARMIL2Q6F5E8 1435 aa9.93□□□□□ -0.82
SEC23IP-203ENST00000446561 PTPRGP23470 1445 aa9.92□□□□□ -0.82
SEC23IP-203ENST00000446561 PKD2Q13563 968 aa9.92□□□□□ -0.82
SEC23IP-203ENST00000446561 NLRP13Q86W25 1043 aa9.92□□□□□ -0.82
SEC23IP-203ENST00000446561 CARD11Q9BXL7 1154 aa9.92□□□□□ -0.82
SEC23IP-203ENST00000446561 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
SEC23IP-203ENST00000446561 EIF4G3O43432 1585 aaKnown RBP9.92□□□□□ -0.82
SEC23IP-203ENST00000446561 C9orf84Q5VXU9 1444 aa9.91□□□□□ -0.82
SEC23IP-203ENST00000446561 PARD3Q8TEW0 1356 aa9.91□□□□□ -0.82
SEC23IP-203ENST00000446561 PAK3O75914 559 aaPredicted RBP9.91□□□□□ -0.82
SEC23IP-203ENST00000446561 NBR1Q14596 966 aa9.91□□□□□ -0.82
SEC23IP-203ENST00000446561 POLR3GLQ9BT43 218 aa9.9□□□□□ -0.82
SEC23IP-203ENST00000446561 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.83
SEC23IP-203ENST00000446561 PRG4Q92954 1404 aaPredicted RBP9.9□□□□□ -0.83
SEC23IP-203ENST00000446561 UNC13BO14795 1591 aa9.89□□□□□ -0.83
SEC23IP-203ENST00000446561 ZNF644Q9H582 1327 aaPredicted RBP9.89□□□□□ -0.83
SEC23IP-203ENST00000446561 NUP155O75694 1391 aa9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 ABCA8O94911 1581 aa9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 MAST1Q9Y2H9 1570 aa9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 ABCC10Q5T3U5 1492 aa9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 ZNF326Q5BKZ1 582 aaKnown RBP9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 RSPH4AQ5TD94 716 aa9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 NUP160Q12769 1436 aa9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
SEC23IP-203ENST00000446561 MYO5CQ9NQX4 1742 aa9.87□□□□□ -0.83
SEC23IP-203ENST00000446561 PRDM15P57071 1507 aaPredicted RBP9.87□□□□□ -0.83
SEC23IP-203ENST00000446561 COL17A1Q9UMD9 1497 aaPredicted RBP9.87□□□□□ -0.83
SEC23IP-203ENST00000446561 PDE4AP27815 886 aa9.87□□□□□ -0.83
SEC23IP-203ENST00000446561 BACH2Q9BYV9 841 aa9.87□□□□□ -0.83
SEC23IP-203ENST00000446561 SYNJ2O15056 1496 aa9.86□□□□□ -0.83
SEC23IP-203ENST00000446561 PREX2Q70Z35 1606 aa9.86□□□□□ -0.83
SEC23IP-203ENST00000446561 TSPY4P0CV99 314 aa9.86□□□□□ -0.83
SEC23IP-203ENST00000446561 TSPY10P0CW01 314 aa9.86□□□□□ -0.83
SEC23IP-203ENST00000446561 PRAG1Q86YV5 1406 aa9.86□□□□□ -0.83
SEC23IP-203ENST00000446561 FAM135AQ9P2D6 1515 aa9.86□□□□□ -0.83
SEC23IP-203ENST00000446561 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
SEC23IP-203ENST00000446561 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
SEC23IP-203ENST00000446561 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
SEC23IP-203ENST00000446561 RNF17Q9BXT8 1623 aaKnown RBP9.85□□□□□ -0.83
SEC23IP-203ENST00000446561 CCDC144AA2RUR9 1427 aa9.84□□□□□ -0.83
SEC23IP-203ENST00000446561 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
SEC23IP-203ENST00000446561 PLEKHD1A6NEE1 506 aa9.84□□□□□ -0.83
SEC23IP-203ENST00000446561 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
SEC23IP-203ENST00000446561 EXOC6Q8TAG9 804 aa9.84□□□□□ -0.83
SEC23IP-203ENST00000446561 PLB1Q6P1J6 1458 aa9.84□□□□□ -0.83
SEC23IP-203ENST00000446561 PLXNC1O60486 1568 aa9.84□□□□□ -0.83
SEC23IP-203ENST00000446561 ARID3CA6NKF2 412 aa9.83□□□□□ -0.84
SEC23IP-203ENST00000446561 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.83□□□□□ -0.84
SEC23IP-203ENST00000446561 VIRMAQ69YN4 1812 aaKnown RBP9.83□□□□□ -0.84
SEC23IP-203ENST00000446561 EIF3AQ14152 1382 aaKnown RBP9.83□□□□□ -0.84
SEC23IP-203ENST00000446561 ZNF608Q9ULD9 1512 aaPredicted RBP9.82□□□□□ -0.84
SEC23IP-203ENST00000446561 NEFMP07197 916 aa9.82□□□□□ -0.84
SEC23IP-203ENST00000446561 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
SEC23IP-203ENST00000446561 DCAF11Q8TEB1 546 aa9.81□□□□□ -0.84
SEC23IP-203ENST00000446561 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
SEC23IP-203ENST00000446561 CDC42BPBQ9Y5S2 1711 aa9.81□□□□□ -0.84
SEC23IP-203ENST00000446561 ERBINQ96RT1 1412 aa9.81□□□□□ -0.84
SEC23IP-203ENST00000446561 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
SEC23IP-203ENST00000446561 ATP10AO60312 1499 aa9.8□□□□□ -0.84
SEC23IP-203ENST00000446561 CENPQQ7L2Z9 268 aaPredicted RBP9.8□□□□□ -0.84
SEC23IP-203ENST00000446561 NPM2Q86SE8 214 aaKnown RBP9.8□□□□□ -0.84
SEC23IP-203ENST00000446561 SYNMO15061 1565 aa9.8□□□□□ -0.84
SEC23IP-203ENST00000446561 TMF1P82094 1093 aa9.79□□□□□ -0.84
SEC23IP-203ENST00000446561 IQGAP1P46940 1657 aa9.79□□□□□ -0.84
SEC23IP-203ENST00000446561 ATP10BO94823 1461 aa9.79□□□□□ -0.84
SEC23IP-203ENST00000446561 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
SEC23IP-203ENST00000446561 CDCA8Q53HL2 280 aa9.78□□□□□ -0.84
SEC23IP-203ENST00000446561 NGEFQ8N5V2 710 aa9.78□□□□□ -0.84
SEC23IP-203ENST00000446561 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
SEC23IP-203ENST00000446561 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
SEC23IP-203ENST00000446561 A2MP01023 1474 aa9.78□□□□□ -0.84
SEC23IP-203ENST00000446561 DUOX2Q9NRD8 1548 aa9.77□□□□□ -0.84
SEC23IP-203ENST00000446561 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
SEC23IP-203ENST00000446561 CNGB1Q14028 1251 aaPredicted RBP9.77□□□□□ -0.85
SEC23IP-203ENST00000446561 MAGI2Q86UL8 1455 aa9.77□□□□□ -0.85
SEC23IP-203ENST00000446561 NINLQ9Y2I6 1382 aa9.76□□□□□ -0.85
SEC23IP-203ENST00000446561 KIAA1210Q9ULL0 1709 aa9.76□□□□□ -0.85
SEC23IP-203ENST00000446561 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
SEC23IP-203ENST00000446561 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
SEC23IP-203ENST00000446561 CRBNQ96SW2 442 aa9.76□□□□□ -0.85
SEC23IP-203ENST00000446561 ABCC2Q92887 1545 aa9.76□□□□□ -0.85
SEC23IP-203ENST00000446561 SPHKAPQ2M3C7 1700 aa9.76□□□□□ -0.85
SEC23IP-203ENST00000446561 PIK3C2GO75747 1445 aa9.75□□□□□ -0.85
SEC23IP-203ENST00000446561 FAM161AQ3B820 660 aa9.75□□□□□ -0.85
SEC23IP-203ENST00000446561 LAS1LQ9Y4W2 734 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms