RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 PTPN5P54829 565 aa9.8□□□□□ -0.84
RAB5A-205ENST00000446547 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
RAB5A-205ENST00000446547 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
RAB5A-205ENST00000446547 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
RAB5A-205ENST00000446547 ZBED2Q9BTP6 218 aa9.78□□□□□ -0.84
RAB5A-205ENST00000446547 NACADO15069 1562 aa9.78□□□□□ -0.84
RAB5A-205ENST00000446547 PTPREP23469 700 aa9.77□□□□□ -0.84
RAB5A-205ENST00000446547 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.84
RAB5A-205ENST00000446547 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
RAB5A-205ENST00000446547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
RAB5A-205ENST00000446547 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
RAB5A-205ENST00000446547 E2F4Q16254 413 aa9.75□□□□□ -0.85
RAB5A-205ENST00000446547 A0A0G2JS52 829 aa9.74□□□□□ -0.85
RAB5A-205ENST00000446547 MRPL50Q8N5N7 158 aaKnown RBP9.74□□□□□ -0.85
RAB5A-205ENST00000446547 WNT2BQ93097 391 aa9.74□□□□□ -0.85
RAB5A-205ENST00000446547 EIF4G1Q04637 1599 aaKnown RBP9.74□□□□□ -0.85
RAB5A-205ENST00000446547 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
RAB5A-205ENST00000446547 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
RAB5A-205ENST00000446547 ZDHHC16Q969W1 377 aa9.72□□□□□ -0.85
RAB5A-205ENST00000446547 GOLGA8CPA6NN73 597 aa9.71□□□□□ -0.86
RAB5A-205ENST00000446547 PDE4AP27815 886 aa9.71□□□□□ -0.86
RAB5A-205ENST00000446547 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
RAB5A-205ENST00000446547 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.86
RAB5A-205ENST00000446547 EVI5O60447 810 aa9.7□□□□□ -0.86
RAB5A-205ENST00000446547 IRX2Q9BZI1 471 aaPredicted RBP9.7□□□□□ -0.86
RAB5A-205ENST00000446547 NBPF3Q9H094 633 aa9.7□□□□□ -0.86
RAB5A-205ENST00000446547 SEMA3EO15041 775 aa9.68□□□□□ -0.86
RAB5A-205ENST00000446547 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
RAB5A-205ENST00000446547 PPP1R3GB7ZBB8 358 aa9.64□□□□□ -0.87
RAB5A-205ENST00000446547 RABGEF1Q9UJ41 708 aa9.64□□□□□ -0.87
RAB5A-205ENST00000446547 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
RAB5A-205ENST00000446547 ITGBL1O95965 494 aaPredicted RBP9.63□□□□□ -0.87
RAB5A-205ENST00000446547 MFSD10Q14728 455 aa9.63□□□□□ -0.87
RAB5A-205ENST00000446547 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
RAB5A-205ENST00000446547 MAP3K9P80192 1104 aa9.62□□□□□ -0.87
RAB5A-205ENST00000446547 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
RAB5A-205ENST00000446547 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
RAB5A-205ENST00000446547 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
RAB5A-205ENST00000446547 ANKK1Q8NFD2 765 aa9.6□□□□□ -0.87
RAB5A-205ENST00000446547 PROX2Q3B8N5 592 aa9.59□□□□□ -0.87
RAB5A-205ENST00000446547 LAPTM4BQ86VI4 370 aa9.59□□□□□ -0.87
RAB5A-205ENST00000446547 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
RAB5A-205ENST00000446547 COL9A1P20849 921 aa9.58□□□□□ -0.88
RAB5A-205ENST00000446547 NYAP1Q6ZVC0 841 aa9.58□□□□□ -0.88
RAB5A-205ENST00000446547 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
RAB5A-205ENST00000446547 ERCC6Q03468 1493 aa9.58□□□□□ -0.88
RAB5A-205ENST00000446547 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
RAB5A-205ENST00000446547 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
RAB5A-205ENST00000446547 ONECUT3O60422 494 aaPredicted RBP9.56□□□□□ -0.88
RAB5A-205ENST00000446547 PHF14O94880 888 aa9.56□□□□□ -0.88
RAB5A-205ENST00000446547 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
RAB5A-205ENST00000446547 SLC24A3Q9HC58 644 aa9.55□□□□□ -0.88
RAB5A-205ENST00000446547 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
RAB5A-205ENST00000446547 BCAMP50895 628 aa9.54□□□□□ -0.88
RAB5A-205ENST00000446547 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
RAB5A-205ENST00000446547 SMYD5Q6GMV2 418 aa9.54□□□□□ -0.88
RAB5A-205ENST00000446547 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
RAB5A-205ENST00000446547 ZFRQ96KR1 1074 aaKnown RBP9.53□□□□□ -0.88
RAB5A-205ENST00000446547 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
RAB5A-205ENST00000446547 SHROOM4Q9ULL8 1493 aa9.52□□□□□ -0.89
RAB5A-205ENST00000446547 KIAA1468Q9P260 1216 aa9.51□□□□□ -0.89
RAB5A-205ENST00000446547 MLLT3P42568 568 aaPredicted RBP9.5□□□□□ -0.89
RAB5A-205ENST00000446547 WBP1LQ9NX94 342 aa9.5□□□□□ -0.89
RAB5A-205ENST00000446547 KCNC4Q03721 635 aa9.49□□□□□ -0.89
RAB5A-205ENST00000446547 NEUROD2Q15784 382 aa9.49□□□□□ -0.89
RAB5A-205ENST00000446547 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
RAB5A-205ENST00000446547 EPAS1Q99814 870 aa9.49□□□□□ -0.89
RAB5A-205ENST00000446547 ZMYND10O75800 440 aa9.48□□□□□ -0.89
RAB5A-205ENST00000446547 RBM26Q5T8P6 1007 aaKnown RBP9.48□□□□□ -0.89
RAB5A-205ENST00000446547 TRIM6-TRIM34B2RNG4 842 aa9.46□□□□□ -0.9
RAB5A-205ENST00000446547 DPYSL4O14531 572 aa9.46□□□□□ -0.9
RAB5A-205ENST00000446547 FAM98CQ17RN3 349 aaKnown RBP9.46□□□□□ -0.9
RAB5A-205ENST00000446547 Q6ZNB5 142 aa9.46□□□□□ -0.9
RAB5A-205ENST00000446547 SEPT9Q9UHD8 586 aaPredicted RBP9.45□□□□□ -0.9
RAB5A-205ENST00000446547 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
RAB5A-205ENST00000446547 BARGINQ6ZT62 677 aa9.43□□□□□ -0.9
RAB5A-205ENST00000446547 LAPTM4AQ15012 233 aa9.42□□□□□ -0.9
RAB5A-205ENST00000446547 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.42□□□□□ -0.9
RAB5A-205ENST00000446547 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
RAB5A-205ENST00000446547 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
RAB5A-205ENST00000446547 THOC2Q8NI27 1593 aaKnown RBP9.4□□□□□ -0.9
RAB5A-205ENST00000446547 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
RAB5A-205ENST00000446547 KRI1Q8N9T8 703 aaKnown RBP9.38□□□□□ -0.91
RAB5A-205ENST00000446547 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
RAB5A-205ENST00000446547 LCE2BO14633 110 aa9.37□□□□□ -0.91
RAB5A-205ENST00000446547 PDIA6Q15084 440 aa9.37□□□□□ -0.91
RAB5A-205ENST00000446547 NESP48681 1621 aa9.36□□□□□ -0.91
RAB5A-205ENST00000446547 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
RAB5A-205ENST00000446547 AK7Q96M32 723 aa9.36□□□□□ -0.91
RAB5A-205ENST00000446547 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
RAB5A-205ENST00000446547 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
RAB5A-205ENST00000446547 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
RAB5A-205ENST00000446547 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
RAB5A-205ENST00000446547 TJAP1Q5JTD0 557 aa9.34□□□□□ -0.91
RAB5A-205ENST00000446547 ERICH6Q7L0X2 663 aa9.34□□□□□ -0.91
RAB5A-205ENST00000446547 DDX12PQ92771 950 aa9.34□□□□□ -0.91
RAB5A-205ENST00000446547 RIMBP3CA6NJZ7 1639 aa9.33□□□□□ -0.92
RAB5A-205ENST00000446547 RIMBP3BA6NNM3 1639 aa9.33□□□□□ -0.92
RAB5A-205ENST00000446547 RIMBP3Q9UFD9 1639 aa9.33□□□□□ -0.92
RAB5A-205ENST00000446547 TRAF7Q6Q0C0 670 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms