RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 PKD2Q13563 968 aa17.17■□□□□ 0.34
ERBB2-203ENST00000445658 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
ERBB2-203ENST00000445658 ERBINQ96RT1 1412 aa17.16■□□□□ 0.34
ERBB2-203ENST00000445658 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
ERBB2-203ENST00000445658 NBR1Q14596 966 aa17.15■□□□□ 0.34
ERBB2-203ENST00000445658 NUP155O75694 1391 aa17.15■□□□□ 0.34
ERBB2-203ENST00000445658 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
ERBB2-203ENST00000445658 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
ERBB2-203ENST00000445658 INO80Q9ULG1 1556 aaPredicted RBP17.14■□□□□ 0.33
ERBB2-203ENST00000445658 ZFYVE16Q7Z3T8 1539 aa17.13■□□□□ 0.33
ERBB2-203ENST00000445658 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
ERBB2-203ENST00000445658 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
ERBB2-203ENST00000445658 DEPDC5O75140 1603 aa17.12■□□□□ 0.33
ERBB2-203ENST00000445658 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
ERBB2-203ENST00000445658 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
ERBB2-203ENST00000445658 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
ERBB2-203ENST00000445658 EIF4G2P78344 907 aaKnown RBP eCLIP17.1■□□□□ 0.33
ERBB2-203ENST00000445658 ASXL2Q76L83 1435 aa17.1■□□□□ 0.33
ERBB2-203ENST00000445658 TRAPPC8Q9Y2L5 1435 aa17.1■□□□□ 0.33
ERBB2-203ENST00000445658 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
ERBB2-203ENST00000445658 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.32
ERBB2-203ENST00000445658 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
ERBB2-203ENST00000445658 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
ERBB2-203ENST00000445658 FANCAO15360 1455 aa17.07■□□□□ 0.32
ERBB2-203ENST00000445658 ATP10AO60312 1499 aa17.07■□□□□ 0.32
ERBB2-203ENST00000445658 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
ERBB2-203ENST00000445658 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
ERBB2-203ENST00000445658 ATP7AQ04656 1500 aa17.05■□□□□ 0.32
ERBB2-203ENST00000445658 KDM5CP41229 1560 aa17.05■□□□□ 0.32
ERBB2-203ENST00000445658 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
ERBB2-203ENST00000445658 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.31
ERBB2-203ENST00000445658 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.31
ERBB2-203ENST00000445658 PLA2R1Q13018 1463 aa17.02■□□□□ 0.31
ERBB2-203ENST00000445658 E9PCH4 1651 aa17.01■□□□□ 0.31
ERBB2-203ENST00000445658 WASHC2AQ641Q2 1341 aa17■□□□□ 0.31
ERBB2-203ENST00000445658 ADGRL1O94910 1474 aa17■□□□□ 0.31
ERBB2-203ENST00000445658 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
ERBB2-203ENST00000445658 TET3O43151 1660 aa16.99■□□□□ 0.31
ERBB2-203ENST00000445658 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
ERBB2-203ENST00000445658 LAMC1P11047 1609 aa16.98■□□□□ 0.31
ERBB2-203ENST00000445658 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-203ENST00000445658 SPHKAPQ2M3C7 1700 aa16.97■□□□□ 0.31
ERBB2-203ENST00000445658 PPP4R2Q9NY27 417 aa16.97■□□□□ 0.31
ERBB2-203ENST00000445658 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
ERBB2-203ENST00000445658 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
ERBB2-203ENST00000445658 CEP152O94986 1710 aa16.97■□□□□ 0.31
ERBB2-203ENST00000445658 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
ERBB2-203ENST00000445658 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.31
ERBB2-203ENST00000445658 C11orf95C9JLR9 678 aaPredicted RBP16.96■□□□□ 0.31
ERBB2-203ENST00000445658 CCDC144AA2RUR9 1427 aa16.95■□□□□ 0.3
ERBB2-203ENST00000445658 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
ERBB2-203ENST00000445658 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
ERBB2-203ENST00000445658 DEKP35659 375 aaKnown RBP16.94■□□□□ 0.3
ERBB2-203ENST00000445658 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
ERBB2-203ENST00000445658 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
ERBB2-203ENST00000445658 TRPM2O94759 1503 aa16.94■□□□□ 0.3
ERBB2-203ENST00000445658 ZNF518AQ6AHZ1 1483 aa16.94■□□□□ 0.3
ERBB2-203ENST00000445658 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
ERBB2-203ENST00000445658 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
ERBB2-203ENST00000445658 RNF17Q9BXT8 1623 aaKnown RBP16.94■□□□□ 0.3
ERBB2-203ENST00000445658 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
ERBB2-203ENST00000445658 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
ERBB2-203ENST00000445658 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
ERBB2-203ENST00000445658 MAP3K4Q9Y6R4 1608 aa16.92■□□□□ 0.3
ERBB2-203ENST00000445658 A2MP01023 1474 aa16.91■□□□□ 0.3
ERBB2-203ENST00000445658 PRAG1Q86YV5 1406 aa16.9■□□□□ 0.3
ERBB2-203ENST00000445658 FANCIQ9NVI1 1328 aa16.9■□□□□ 0.3
ERBB2-203ENST00000445658 PTPRTO14522 1441 aa16.9■□□□□ 0.3
ERBB2-203ENST00000445658 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-203ENST00000445658 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
ERBB2-203ENST00000445658 USP47Q96K76 1375 aa16.9■□□□□ 0.3
ERBB2-203ENST00000445658 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
ERBB2-203ENST00000445658 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
ERBB2-203ENST00000445658 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
ERBB2-203ENST00000445658 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
ERBB2-203ENST00000445658 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
ERBB2-203ENST00000445658 GLI2P10070 1586 aa16.88■□□□□ 0.29
ERBB2-203ENST00000445658 NEO1Q92859 1461 aa16.88■□□□□ 0.29
ERBB2-203ENST00000445658 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
ERBB2-203ENST00000445658 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-203ENST00000445658 MLH3Q9UHC1 1453 aa16.88■□□□□ 0.29
ERBB2-203ENST00000445658 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
ERBB2-203ENST00000445658 CLTCL1P53675 1640 aa16.87■□□□□ 0.29
ERBB2-203ENST00000445658 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
ERBB2-203ENST00000445658 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
ERBB2-203ENST00000445658 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
ERBB2-203ENST00000445658 KIF7Q2M1P5 1343 aa16.86■□□□□ 0.29
ERBB2-203ENST00000445658 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
ERBB2-203ENST00000445658 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
ERBB2-203ENST00000445658 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
ERBB2-203ENST00000445658 RICTORQ6R327 1708 aa16.85■□□□□ 0.29
ERBB2-203ENST00000445658 ABCA6Q8N139 1617 aa16.84■□□□□ 0.29
ERBB2-203ENST00000445658 MADDQ8WXG6 1647 aa16.84■□□□□ 0.29
ERBB2-203ENST00000445658 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.29
ERBB2-203ENST00000445658 PPRC1Q5VV67 1664 aaKnown RBP16.83■□□□□ 0.28
ERBB2-203ENST00000445658 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
ERBB2-203ENST00000445658 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
ERBB2-203ENST00000445658 KANK1Q14678 1352 aa16.82■□□□□ 0.28
ERBB2-203ENST00000445658 KIAA1210Q9ULL0 1709 aa16.81■□□□□ 0.28
ERBB2-203ENST00000445658 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms