RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 SCAPERQ9BY12 1400 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 KIDINS220Q9ULH0 1771 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 NUP155O75694 1391 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 KANK1Q14678 1352 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 TET3O43151 1660 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 ZC3H13Q5T200 1668 aaKnown RBP4.04□□□□□ -1.76
LINC00393-201ENST00000443621 CHIC2Q9UKJ5 165 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 ZNF777Q9ULD5 760 aaPredicted RBP4.04□□□□□ -1.76
LINC00393-201ENST00000443621 DIP2BQ9P265 1576 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 RICTORQ6R327 1708 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 ARHGAP31Q2M1Z3 1444 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 TRAPPC8Q9Y2L5 1435 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 LAMC1P11047 1609 aa4.03□□□□□ -1.76
LINC00393-201ENST00000443621 TRIM52Q96A61 297 aa4.03□□□□□ -1.76
LINC00393-201ENST00000443621 KCNH8Q96L42 1107 aa4.03□□□□□ -1.76
LINC00393-201ENST00000443621 AGLP35573 1532 aa4.03□□□□□ -1.76
LINC00393-201ENST00000443621 POLR1AO95602 1720 aaPredicted RBP4.03□□□□□ -1.76
LINC00393-201ENST00000443621 TRPM2O94759 1503 aa4.02□□□□□ -1.77
LINC00393-201ENST00000443621 ARID3CA6NKF2 412 aa4.02□□□□□ -1.77
LINC00393-201ENST00000443621 AEBP2Q6ZN18 517 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-201ENST00000443621 A2MP01023 1474 aa4.02□□□□□ -1.77
LINC00393-201ENST00000443621 KIAA1210Q9ULL0 1709 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 PKD2Q13563 968 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 DIEXFQ68CQ4 756 aaKnown RBP4.01□□□□□ -1.77
LINC00393-201ENST00000443621 SIN3AQ96ST3 1273 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 CCDC144AA2RUR9 1427 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 SPATA31E1Q6ZUB1 1445 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 CNTLNQ9NXG0 1405 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 CEP152O94986 1710 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 SPHKAPQ2M3C7 1700 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 GPRASP1Q5JY77 1395 aa4.01□□□□□ -1.77
LINC00393-201ENST00000443621 EFCAB6Q5THR3 1501 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 E9PCH4 1651 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 RPGRIP1LQ68CZ1 1315 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 RALGAPBQ86X10 1494 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 MROH1Q8NDA8 1641 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 EIF4G2P78344 907 aaKnown RBP eCLIP4□□□□□ -1.77
LINC00393-201ENST00000443621 AFAP1Q8N556 730 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 L3MBTL2Q969R5 705 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 DIP2CQ9Y2E4 1556 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 ROCK2O75116 1388 aaKnown RBP4□□□□□ -1.77
LINC00393-201ENST00000443621 KDM5AP29375 1690 aaKnown RBP4□□□□□ -1.77
LINC00393-201ENST00000443621 PPRC1Q5VV67 1664 aaKnown RBP4□□□□□ -1.77
LINC00393-201ENST00000443621 KIF13AQ9H1H9 1805 aa4□□□□□ -1.77
LINC00393-201ENST00000443621 PLA2R1Q13018 1463 aa3.99□□□□□ -1.77
LINC00393-201ENST00000443621 ZFYVE9O95405 1425 aa3.99□□□□□ -1.77
LINC00393-201ENST00000443621 CYB5RLQ6IPT4 315 aa3.99□□□□□ -1.77
LINC00393-201ENST00000443621 SLC52A1Q9NWF4 448 aa3.99□□□□□ -1.77
LINC00393-201ENST00000443621 KIF1BO60333 1816 aa3.99□□□□□ -1.77
LINC00393-201ENST00000443621 KTN1Q86UP2 1357 aaKnown RBP3.99□□□□□ -1.77
LINC00393-201ENST00000443621 ABCA6Q8N139 1617 aa3.99□□□□□ -1.77
LINC00393-201ENST00000443621 MYOM2P54296 1465 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 WASHC2AQ641Q2 1341 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 WASHC2CQ9Y4E1 1318 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 FRMPD1Q5SYB0 1578 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 NOS1P29475 1434 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 NEUROD1Q13562 356 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 PIK3C2BO00750 1634 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 TRPM1Q7Z4N2 1603 aa3.98□□□□□ -1.77
LINC00393-201ENST00000443621 SETBP1Q9Y6X0 1596 aa3.97□□□□□ -1.77
LINC00393-201ENST00000443621 PRAG1Q86YV5 1406 aa3.97□□□□□ -1.77
LINC00393-201ENST00000443621 CCER2I3L3R5 266 aa3.97□□□□□ -1.77
LINC00393-201ENST00000443621 FAM69CQ0P6D2 419 aa3.97□□□□□ -1.77
LINC00393-201ENST00000443621 PUS7Q96PZ0 661 aaKnown RBP3.97□□□□□ -1.77
LINC00393-201ENST00000443621 IFT172Q9UG01 1749 aa3.97□□□□□ -1.77
LINC00393-201ENST00000443621 SBNO2Q9Y2G9 1366 aa3.97□□□□□ -1.77
LINC00393-201ENST00000443621 NRXN1Q9ULB1 1477 aa3.97□□□□□ -1.77
LINC00393-201ENST00000443621 ABCC3O15438 1527 aa3.96□□□□□ -1.78
LINC00393-201ENST00000443621 ARHGEF40Q8TER5 1519 aa3.96□□□□□ -1.78
LINC00393-201ENST00000443621 CAMSAP1Q5T5Y3 1602 aa3.96□□□□□ -1.78
LINC00393-201ENST00000443621 KIF3BO15066 747 aa3.96□□□□□ -1.78
LINC00393-201ENST00000443621 CDCA8Q53HL2 280 aa3.96□□□□□ -1.78
LINC00393-201ENST00000443621 UGGT1Q9NYU2 1555 aa3.96□□□□□ -1.78
LINC00393-201ENST00000443621 MROH2AA6NES4 1674 aa3.96□□□□□ -1.78
LINC00393-201ENST00000443621 NPATQ14207 1427 aa3.95□□□□□ -1.78
LINC00393-201ENST00000443621 ADGRB3O60242 1522 aa3.95□□□□□ -1.78
LINC00393-201ENST00000443621 CLTCL1P53675 1640 aa3.95□□□□□ -1.78
LINC00393-201ENST00000443621 MADDQ8WXG6 1647 aa3.95□□□□□ -1.78
LINC00393-201ENST00000443621 SPATA31D1Q6ZQQ2 1576 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 EIF3AQ14152 1382 aaKnown RBP3.94□□□□□ -1.78
LINC00393-201ENST00000443621 USP47Q96K76 1375 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 VGFO15240 615 aaPredicted RBP3.94□□□□□ -1.78
LINC00393-201ENST00000443621 NBPF8Q3BBV2 869 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 DCAF11Q8TEB1 546 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 MYO3AQ8NEV4 1616 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 PPLO60437 1756 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 IQGAP1P46940 1657 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 PREX1Q8TCU6 1659 aa3.94□□□□□ -1.78
LINC00393-201ENST00000443621 SCAF11Q99590 1463 aaKnown RBP3.93□□□□□ -1.78
LINC00393-201ENST00000443621 INSRP06213 1382 aa3.93□□□□□ -1.78
LINC00393-201ENST00000443621 CCDC7Q96M83 1385 aa3.93□□□□□ -1.78
LINC00393-201ENST00000443621 RAPGEF3O95398 923 aa3.93□□□□□ -1.78
LINC00393-201ENST00000443621 CENPBP07199 599 aaPredicted RBP3.93□□□□□ -1.78
LINC00393-201ENST00000443621 HSPA5P11021 654 aaKnown RBP3.93□□□□□ -1.78
LINC00393-201ENST00000443621 HDGFP51858 240 aaKnown RBP3.93□□□□□ -1.78
LINC00393-201ENST00000443621 FOXD1Q16676 465 aa3.93□□□□□ -1.78
LINC00393-201ENST00000443621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.93□□□□□ -1.78
LINC00393-201ENST00000443621 SYNMO15061 1565 aa3.93□□□□□ -1.78
LINC00393-201ENST00000443621 NPC1L1Q9UHC9 1359 aa3.92□□□□□ -1.78
LINC00393-201ENST00000443621 ANP32CO43423 234 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms