RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 RUSC2Q8N2Y8 1516 aa11.53□□□□□ -0.56
R3HDM1-210ENST00000443537 GOLGA3Q08378 1498 aa11.52□□□□□ -0.56
R3HDM1-210ENST00000443537 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
R3HDM1-210ENST00000443537 IGF1RP08069 1367 aa11.52□□□□□ -0.57
R3HDM1-210ENST00000443537 TESPA1A2RU30 521 aaPredicted RBP11.51□□□□□ -0.57
R3HDM1-210ENST00000443537 MAP3K9P80192 1104 aa11.51□□□□□ -0.57
R3HDM1-210ENST00000443537 SMYD5Q6GMV2 418 aa11.51□□□□□ -0.57
R3HDM1-210ENST00000443537 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
R3HDM1-210ENST00000443537 TDRD9Q8NDG6 1382 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-210ENST00000443537 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
R3HDM1-210ENST00000443537 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
R3HDM1-210ENST00000443537 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
R3HDM1-210ENST00000443537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
R3HDM1-210ENST00000443537 FHAD1B1AJZ9 1412 aa11.49□□□□□ -0.57
R3HDM1-210ENST00000443537 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-210ENST00000443537 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
R3HDM1-210ENST00000443537 AQRO60306 1485 aaKnown RBP eCLIP11.48□□□□□ -0.57
R3HDM1-210ENST00000443537 FAM9AQ8IZU1 332 aaPredicted RBP11.46□□□□□ -0.57
R3HDM1-210ENST00000443537 CTTNBP2Q8WZ74 1663 aa11.46□□□□□ -0.58
R3HDM1-210ENST00000443537 PDIA6Q15084 440 aa11.45□□□□□ -0.58
R3HDM1-210ENST00000443537 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
R3HDM1-210ENST00000443537 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
R3HDM1-210ENST00000443537 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
R3HDM1-210ENST00000443537 TBC1D12O60347 775 aa11.42□□□□□ -0.58
R3HDM1-210ENST00000443537 MLLT3P42568 568 aaPredicted RBP11.42□□□□□ -0.58
R3HDM1-210ENST00000443537 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
R3HDM1-210ENST00000443537 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
R3HDM1-210ENST00000443537 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
R3HDM1-210ENST00000443537 GRIN2AQ12879 1464 aa11.4□□□□□ -0.58
R3HDM1-210ENST00000443537 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
R3HDM1-210ENST00000443537 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
R3HDM1-210ENST00000443537 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
R3HDM1-210ENST00000443537 GRXCR2A6NFK2 248 aa11.38□□□□□ -0.59
R3HDM1-210ENST00000443537 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
R3HDM1-210ENST00000443537 CHD1O14646 1710 aa11.38□□□□□ -0.59
R3HDM1-210ENST00000443537 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
R3HDM1-210ENST00000443537 EVI5O60447 810 aa11.36□□□□□ -0.59
R3HDM1-210ENST00000443537 SLC34A2O95436 690 aa11.36□□□□□ -0.59
R3HDM1-210ENST00000443537 UBTFP17480 764 aaKnown RBP11.36□□□□□ -0.59
R3HDM1-210ENST00000443537 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
R3HDM1-210ENST00000443537 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
R3HDM1-210ENST00000443537 NUP160Q12769 1436 aa11.35□□□□□ -0.59
R3HDM1-210ENST00000443537 IQGAP2Q13576 1575 aa11.34□□□□□ -0.59
R3HDM1-210ENST00000443537 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
R3HDM1-210ENST00000443537 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
R3HDM1-210ENST00000443537 DDX12PQ92771 950 aa11.33□□□□□ -0.6
R3HDM1-210ENST00000443537 KIAA0586Q9BVV6 1533 aa11.33□□□□□ -0.6
R3HDM1-210ENST00000443537 GPIHBP1Q8IV16 184 aa11.31□□□□□ -0.6
R3HDM1-210ENST00000443537 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
R3HDM1-210ENST00000443537 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
R3HDM1-210ENST00000443537 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
R3HDM1-210ENST00000443537 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
R3HDM1-210ENST00000443537 CEP170Q5SW79 1584 aa11.29□□□□□ -0.6
R3HDM1-210ENST00000443537 UGGT2Q9NYU1 1516 aa11.29□□□□□ -0.6
R3HDM1-210ENST00000443537 CLIP1P30622 1438 aa11.28□□□□□ -0.6
R3HDM1-210ENST00000443537 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
R3HDM1-210ENST00000443537 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
R3HDM1-210ENST00000443537 PTGER2P43116 358 aa11.27□□□□□ -0.61
R3HDM1-210ENST00000443537 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
R3HDM1-210ENST00000443537 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
R3HDM1-210ENST00000443537 SHROOM2Q13796 1616 aa11.25□□□□□ -0.61
R3HDM1-210ENST00000443537 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
R3HDM1-210ENST00000443537 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
R3HDM1-210ENST00000443537 OSBPP22059 807 aa11.23□□□□□ -0.61
R3HDM1-210ENST00000443537 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
R3HDM1-210ENST00000443537 ARSIQ5FYB1 569 aa11.22□□□□□ -0.61
R3HDM1-210ENST00000443537 CARMIL2Q6F5E8 1435 aa11.22□□□□□ -0.61
R3HDM1-210ENST00000443537 KIAA0556O60303 1618 aa11.21□□□□□ -0.61
R3HDM1-210ENST00000443537 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.61
R3HDM1-210ENST00000443537 SNPHO15079 494 aa11.21□□□□□ -0.61
R3HDM1-210ENST00000443537 ZMYND10O75800 440 aa11.21□□□□□ -0.61
R3HDM1-210ENST00000443537 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
R3HDM1-210ENST00000443537 NUDT7P0C024 238 aa11.2□□□□□ -0.62
R3HDM1-210ENST00000443537 KRI1Q8N9T8 703 aaKnown RBP11.2□□□□□ -0.62
R3HDM1-210ENST00000443537 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
R3HDM1-210ENST00000443537 PHF14O94880 888 aa11.19□□□□□ -0.62
R3HDM1-210ENST00000443537 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.622e-10■■■■■ 31.6
R3HDM1-210ENST00000443537 EPAS1Q99814 870 aa11.19□□□□□ -0.62
R3HDM1-210ENST00000443537 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
R3HDM1-210ENST00000443537 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
R3HDM1-210ENST00000443537 RBM33Q96EV2 1170 aaKnown RBP11.18□□□□□ -0.62
R3HDM1-210ENST00000443537 LHX8Q68G74 356 aa11.17□□□□□ -0.62
R3HDM1-210ENST00000443537 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
R3HDM1-210ENST00000443537 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
R3HDM1-210ENST00000443537 DISP1Q96F81 1524 aa11.16□□□□□ -0.62
R3HDM1-210ENST00000443537 MAP3K7O43318 606 aa11.16□□□□□ -0.62
R3HDM1-210ENST00000443537 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
R3HDM1-210ENST00000443537 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
R3HDM1-210ENST00000443537 FCHSD2O94868 740 aa11.15□□□□□ -0.62
R3HDM1-210ENST00000443537 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.62
R3HDM1-210ENST00000443537 GPR153Q6NV75 609 aa11.15□□□□□ -0.62
R3HDM1-210ENST00000443537 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
R3HDM1-210ENST00000443537 PCDHGA10Q9Y5H3 936 aa11.15□□□□□ -0.62
R3HDM1-210ENST00000443537 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
R3HDM1-210ENST00000443537 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
R3HDM1-210ENST00000443537 ZNF454Q8N9F8 522 aa11.14□□□□□ -0.63
R3HDM1-210ENST00000443537 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
R3HDM1-210ENST00000443537 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
R3HDM1-210ENST00000443537 MAP3K1Q13233 1512 aa11.13□□□□□ -0.63
R3HDM1-210ENST00000443537 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms