RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 HMMRO75330 724 aa19.34■□□□□ 0.69
CDH23-207ENST00000442677 APPP05067 770 aa19.34■□□□□ 0.69
CDH23-207ENST00000442677 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
CDH23-207ENST00000442677 PCMTD1Q96MG8 357 aaPredicted RBP19.34■□□□□ 0.69
CDH23-207ENST00000442677 STK31Q9BXU1 1019 aa19.34■□□□□ 0.69
CDH23-207ENST00000442677 MCTP1Q6DN14 999 aa19.33■□□□□ 0.69
CDH23-207ENST00000442677 FBXW7Q969H0 707 aa19.33■□□□□ 0.68
CDH23-207ENST00000442677 TPM2P07951 284 aa19.32■□□□□ 0.68
CDH23-207ENST00000442677 CENPJQ9HC77 1338 aaPredicted RBP19.31■□□□□ 0.68
CDH23-207ENST00000442677 HDGFL2Q7Z4V5 671 aaPredicted RBP19.31■□□□□ 0.68
CDH23-207ENST00000442677 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
CDH23-207ENST00000442677 NOM1Q5C9Z4 860 aaKnown RBP19.31■□□□□ 0.68
CDH23-207ENST00000442677 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.3■□□□□ 0.68
CDH23-207ENST00000442677 FAM43AQ8N2R8 423 aa19.3■□□□□ 0.68
CDH23-207ENST00000442677 PLIN1O60240 522 aa19.3■□□□□ 0.68
CDH23-207ENST00000442677 RALBP1Q15311 655 aa19.29■□□□□ 0.68
CDH23-207ENST00000442677 KIF3AQ9Y496 699 aa19.29■□□□□ 0.68
CDH23-207ENST00000442677 ANKRD45Q5TZF3 282 aa19.29■□□□□ 0.68
CDH23-207ENST00000442677 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
CDH23-207ENST00000442677 ROCK2O75116 1388 aaKnown RBP19.28■□□□□ 0.68
CDH23-207ENST00000442677 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
CDH23-207ENST00000442677 R3HCC1Q9Y3T6 440 aaKnown RBP19.27■□□□□ 0.68
CDH23-207ENST00000442677 SPAG9O60271 1321 aaKnown RBP19.27■□□□□ 0.68
CDH23-207ENST00000442677 RUFY1Q96T51 708 aa19.27■□□□□ 0.67
CDH23-207ENST00000442677 PKNOX2Q96KN3 472 aa19.26■□□□□ 0.67
CDH23-207ENST00000442677 CSB-PGBD3P0DP91 1061 aa19.25■□□□□ 0.67
CDH23-207ENST00000442677 ATP6V1DQ9Y5K8 247 aa19.25■□□□□ 0.67
CDH23-207ENST00000442677 IFT57Q9NWB7 429 aa19.24■□□□□ 0.67
CDH23-207ENST00000442677 AK7Q96M32 723 aa19.24■□□□□ 0.67
CDH23-207ENST00000442677 CENPQQ7L2Z9 268 aaPredicted RBP19.24■□□□□ 0.67
CDH23-207ENST00000442677 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
CDH23-207ENST00000442677 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
CDH23-207ENST00000442677 MLECQ14165 292 aa19.23■□□□□ 0.67
CDH23-207ENST00000442677 RRP7AQ9Y3A4 280 aaKnown RBP19.22■□□□□ 0.67
CDH23-207ENST00000442677 IPO7O95373 1038 aaKnown RBP19.22■□□□□ 0.67
CDH23-207ENST00000442677 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
CDH23-207ENST00000442677 KANK1Q14678 1352 aa19.22■□□□□ 0.67
CDH23-207ENST00000442677 CRBNQ96SW2 442 aa19.21■□□□□ 0.67
CDH23-207ENST00000442677 EXOC6Q8TAG9 804 aa19.21■□□□□ 0.67
CDH23-207ENST00000442677 MNS1Q8NEH6 495 aa19.21■□□□□ 0.67
CDH23-207ENST00000442677 G3V3G9 751 aa19.21■□□□□ 0.67
CDH23-207ENST00000442677 AKAP17AQ02040 695 aaKnown RBP19.21■□□□□ 0.67
CDH23-207ENST00000442677 DCAF8Q5TAQ9 597 aa19.21■□□□□ 0.67
CDH23-207ENST00000442677 PLCD4Q9BRC7 762 aa19.2■□□□□ 0.66
CDH23-207ENST00000442677 TMX4Q9H1E5 349 aaPredicted RBP19.2■□□□□ 0.66
CDH23-207ENST00000442677 BICD2Q8TD16 824 aa19.2■□□□□ 0.66
CDH23-207ENST00000442677 SETD5Q9C0A6 1442 aa19.2■□□□□ 0.66
CDH23-207ENST00000442677 NAP1L1P55209 391 aaKnown RBP19.19■□□□□ 0.66
CDH23-207ENST00000442677 FOSBP53539 338 aa19.19■□□□□ 0.66
CDH23-207ENST00000442677 ARGLU1Q9NWB6 273 aaPredicted RBP19.19■□□□□ 0.66
CDH23-207ENST00000442677 H0YHG0 523 aa19.19■□□□□ 0.66
CDH23-207ENST00000442677 SKIDA1Q1XH10 827 aa19.18■□□□□ 0.66
CDH23-207ENST00000442677 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
CDH23-207ENST00000442677 RBM10P98175 930 aaKnown RBP19.17■□□□□ 0.66
CDH23-207ENST00000442677 PKD2Q13563 968 aa19.17■□□□□ 0.66
CDH23-207ENST00000442677 RDXP35241 583 aaKnown RBP19.16■□□□□ 0.66
CDH23-207ENST00000442677 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
CDH23-207ENST00000442677 HSP90B2PQ58FF3 399 aa19.16■□□□□ 0.66
CDH23-207ENST00000442677 EEA1Q15075 1411 aa19.16■□□□□ 0.66
CDH23-207ENST00000442677 SASS6Q6UVJ0 657 aa19.15■□□□□ 0.66
CDH23-207ENST00000442677 ANO2Q9NQ90 1003 aa19.15■□□□□ 0.66
CDH23-207ENST00000442677 ACBD3Q9H3P7 528 aa19.15■□□□□ 0.66
CDH23-207ENST00000442677 ELL2O00472 640 aaPredicted RBP19.14■□□□□ 0.65
CDH23-207ENST00000442677 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
CDH23-207ENST00000442677 ANKRD20A12PQ8NF67 263 aa19.14■□□□□ 0.65
CDH23-207ENST00000442677 FANCIQ9NVI1 1328 aa19.14■□□□□ 0.65
CDH23-207ENST00000442677 CCDC191Q8NCU4 936 aa19.13■□□□□ 0.65
CDH23-207ENST00000442677 CWC15Q9P013 229 aaKnown RBP19.13■□□□□ 0.65
CDH23-207ENST00000442677 TRIM29Q14134 588 aa19.13■□□□□ 0.65
CDH23-207ENST00000442677 TTLL5Q6EMB2 1281 aa19.13■□□□□ 0.65
CDH23-207ENST00000442677 RAD21O60216 631 aa19.12■□□□□ 0.65
CDH23-207ENST00000442677 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
CDH23-207ENST00000442677 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
CDH23-207ENST00000442677 HDAC5Q9UQL6 1122 aa19.12■□□□□ 0.65
CDH23-207ENST00000442677 CDR1P51861 262 aa19.12■□□□□ 0.65
CDH23-207ENST00000442677 RRP1P56182 461 aaKnown RBP19.12■□□□□ 0.65
CDH23-207ENST00000442677 SYNE3Q6ZMZ3 975 aa19.12■□□□□ 0.65
CDH23-207ENST00000442677 DHX37Q8IY37 1157 aaKnown RBP19.12■□□□□ 0.65
CDH23-207ENST00000442677 PODXL2Q9NZ53 605 aa19.12■□□□□ 0.65
CDH23-207ENST00000442677 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
CDH23-207ENST00000442677 VPS37CA5D8V6 355 aaPredicted RBP19.11■□□□□ 0.65
CDH23-207ENST00000442677 DIAPH3Q9NSV4 1193 aa19.11■□□□□ 0.65
CDH23-207ENST00000442677 COG6Q9Y2V7 657 aa19.11■□□□□ 0.65
CDH23-207ENST00000442677 PDE3BQ13370 1112 aa19.11■□□□□ 0.65
CDH23-207ENST00000442677 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
CDH23-207ENST00000442677 PDILTQ8N807 584 aa19.1■□□□□ 0.65
CDH23-207ENST00000442677 NASPP49321 788 aaPredicted RBP19.1■□□□□ 0.65
CDH23-207ENST00000442677 HDGFP51858 240 aaKnown RBP19.1■□□□□ 0.65
CDH23-207ENST00000442677 NFKBIBQ15653 356 aa19.08■□□□□ 0.65
CDH23-207ENST00000442677 CAGE1Q8TC20 777 aa19.08■□□□□ 0.65
CDH23-207ENST00000442677 CCDC66A2RUB6 948 aa19.08■□□□□ 0.65
CDH23-207ENST00000442677 RNF214Q8ND24 703 aa19.08■□□□□ 0.65
CDH23-207ENST00000442677 CCDC39Q9UFE4 941 aa19.08■□□□□ 0.64
CDH23-207ENST00000442677 TCEAL9Q9UHQ7 104 aa19.08■□□□□ 0.64
CDH23-207ENST00000442677 HOOK1Q9UJC3 728 aaKnown RBP19.08■□□□□ 0.64
CDH23-207ENST00000442677 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
CDH23-207ENST00000442677 CCDC47Q96A33 483 aaKnown RBP19.07■□□□□ 0.64
CDH23-207ENST00000442677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDH23-207ENST00000442677 BRPF3Q9ULD4 1205 aa19.07■□□□□ 0.64
CDH23-207ENST00000442677 GGT6Q6P531 493 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms