RNA–Protein interactions for RNA: ENST00000442228.1

HCG25-219, Transcript of HLA complex group 25, humanhuman

TSL 5

Gene HCG25, Length 469 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG25-219ENST00000442228 ABCA6Q8N139 1617 aa9.06□□□□□ -0.96
HCG25-219ENST00000442228 UBE2Q2Q8WVN8 375 aa9.06□□□□□ -0.96
HCG25-219ENST00000442228 NCOA1Q15788 1441 aa9.05□□□□□ -0.96
HCG25-219ENST00000442228 CDC42BPBQ9Y5S2 1711 aa9.05□□□□□ -0.96
HCG25-219ENST00000442228 KDM5CP41229 1560 aa9.05□□□□□ -0.96
HCG25-219ENST00000442228 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
HCG25-219ENST00000442228 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
HCG25-219ENST00000442228 REREQ9P2R6 1566 aa9.04□□□□□ -0.96
HCG25-219ENST00000442228 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
HCG25-219ENST00000442228 ZNF335Q9H4Z2 1342 aaPredicted RBP9.04□□□□□ -0.96
HCG25-219ENST00000442228 MROH2AA6NES4 1674 aa9.04□□□□□ -0.96
HCG25-219ENST00000442228 PIP4P2Q8N4L2 257 aa9.03□□□□□ -0.96
HCG25-219ENST00000442228 CLIP1P30622 1438 aa9.03□□□□□ -0.96
HCG25-219ENST00000442228 CNTLNQ9NXG0 1405 aa9.03□□□□□ -0.96
HCG25-219ENST00000442228 CLTCQ00610 1675 aaKnown RBP9.03□□□□□ -0.96
HCG25-219ENST00000442228 ITSN2Q9NZM3 1697 aa9.03□□□□□ -0.96
HCG25-219ENST00000442228 PIP4K2BP78356 416 aa9.02□□□□□ -0.97
HCG25-219ENST00000442228 LRRIQ1Q96JM4 1722 aa9.02□□□□□ -0.97
HCG25-219ENST00000442228 KIDINS220Q9ULH0 1771 aa9.01□□□□□ -0.97
HCG25-219ENST00000442228 AGLP35573 1532 aa9.01□□□□□ -0.97
HCG25-219ENST00000442228 MED1Q15648 1581 aaPredicted RBP9.01□□□□□ -0.97
HCG25-219ENST00000442228 MLH3Q9UHC1 1453 aa9.01□□□□□ -0.97
HCG25-219ENST00000442228 FMN1Q68DA7 1419 aa9□□□□□ -0.97
HCG25-219ENST00000442228 PREX2Q70Z35 1606 aa9□□□□□ -0.97
HCG25-219ENST00000442228 MYO3AQ8NEV4 1616 aa9□□□□□ -0.97
HCG25-219ENST00000442228 NPATQ14207 1427 aa8.99□□□□□ -0.97
HCG25-219ENST00000442228 EEA1Q15075 1411 aa8.99□□□□□ -0.97
HCG25-219ENST00000442228 UBTFP17480 764 aaKnown RBP8.99□□□□□ -0.97
HCG25-219ENST00000442228 HSPA1LP34931 641 aa8.99□□□□□ -0.97
HCG25-219ENST00000442228 FXR2P51116 673 aaKnown RBP eCLIP8.99□□□□□ -0.97
HCG25-219ENST00000442228 PKD2Q13563 968 aa8.99□□□□□ -0.97
HCG25-219ENST00000442228 ARXQ96QS3 562 aa8.99□□□□□ -0.97
HCG25-219ENST00000442228 ZNF142P52746 1687 aaPredicted RBP8.99□□□□□ -0.97
HCG25-219ENST00000442228 CDC42BPAQ5VT25 1732 aa8.99□□□□□ -0.97
HCG25-219ENST00000442228 ZMYM3Q14202 1370 aa8.99□□□□□ -0.97
HCG25-219ENST00000442228 TROQ12816 1431 aaPredicted RBP8.98□□□□□ -0.97
HCG25-219ENST00000442228 POLR1AO95602 1720 aaPredicted RBP8.98□□□□□ -0.97
HCG25-219ENST00000442228 TOM1O60784 492 aa8.98□□□□□ -0.97
HCG25-219ENST00000442228 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
HCG25-219ENST00000442228 ABCC1P33527 1531 aa8.98□□□□□ -0.97
HCG25-219ENST00000442228 ZEB1P37275 1124 aaPredicted RBP8.97□□□□□ -0.97
HCG25-219ENST00000442228 ZNF777Q9ULD5 760 aaPredicted RBP8.97□□□□□ -0.97
HCG25-219ENST00000442228 CEP170BQ9Y4F5 1589 aaPredicted RBP8.97□□□□□ -0.97
HCG25-219ENST00000442228 GGT6Q6P531 493 aa8.95□□□□□ -0.98
HCG25-219ENST00000442228 PPARGC1BQ86YN6 1023 aaKnown RBP8.95□□□□□ -0.98
HCG25-219ENST00000442228 PLA2R1Q13018 1463 aa8.95□□□□□ -0.98
HCG25-219ENST00000442228 SPAG9O60271 1321 aaKnown RBP8.94□□□□□ -0.98
HCG25-219ENST00000442228 SAMD9LQ8IVG5 1584 aa8.94□□□□□ -0.98
HCG25-219ENST00000442228 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
HCG25-219ENST00000442228 TCOF1Q13428 1488 aaKnown RBP8.93□□□□□ -0.98
HCG25-219ENST00000442228 DNMT1P26358 1616 aaKnown RBP8.92□□□□□ -0.98
HCG25-219ENST00000442228 CPS1P31327 1500 aa8.92□□□□□ -0.98
HCG25-219ENST00000442228 ARHGAP35Q9NRY4 1499 aa8.92□□□□□ -0.98
HCG25-219ENST00000442228 HNRNPMP52272 730 aaKnown RBP eCLIP8.92□□□□□ -0.98
HCG25-219ENST00000442228 ADGBQ8N7X0 1667 aa8.91□□□□□ -0.98
HCG25-219ENST00000442228 SYCP2Q9BX26 1530 aa8.91□□□□□ -0.98
HCG25-219ENST00000442228 PTPRKQ15262 1439 aa8.91□□□□□ -0.98
HCG25-219ENST00000442228 ATP7AQ04656 1500 aa8.9□□□□□ -0.98
HCG25-219ENST00000442228 SHANK2Q9UPX8 1470 aa8.9□□□□□ -0.98
HCG25-219ENST00000442228 PODXL2Q9NZ53 605 aa8.9□□□□□ -0.98
HCG25-219ENST00000442228 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
HCG25-219ENST00000442228 A2MP01023 1474 aa8.89□□□□□ -0.99
HCG25-219ENST00000442228 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
HCG25-219ENST00000442228 CFAP65Q6ZU64 1925 aaKnown RBP8.89□□□□□ -0.99
HCG25-219ENST00000442228 A2ML1A8K2U0 1454 aa8.89□□□□□ -0.99
HCG25-219ENST00000442228 INO80Q9ULG1 1556 aaPredicted RBP8.88□□□□□ -0.99
HCG25-219ENST00000442228 GTF3C3Q9Y5Q9 886 aa8.88□□□□□ -0.99
HCG25-219ENST00000442228 PLXNC1O60486 1568 aa8.87□□□□□ -0.99
HCG25-219ENST00000442228 NEURL4Q96JN8 1562 aa8.87□□□□□ -0.99
HCG25-219ENST00000442228 ANKLE2Q86XL3 938 aa8.87□□□□□ -0.99
HCG25-219ENST00000442228 IQGAP1P46940 1657 aa8.86□□□□□ -0.99
HCG25-219ENST00000442228 PLEKHG5O94827 1062 aa8.86□□□□□ -0.99
HCG25-219ENST00000442228 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
HCG25-219ENST00000442228 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
HCG25-219ENST00000442228 PLEKHH2Q8IVE3 1493 aa8.85□□□□□ -0.99
HCG25-219ENST00000442228 HAX1O00165 279 aa8.85□□□□□ -0.99
HCG25-219ENST00000442228 THEMISQ8N1K5 641 aaPredicted RBP8.85□□□□□ -0.99
HCG25-219ENST00000442228 STRCP1A6NGW2 1772 aa8.85□□□□□ -0.99
HCG25-219ENST00000442228 VWDEQ8N2E2 1590 aa8.85□□□□□ -0.99
HCG25-219ENST00000442228 TNRQ92752 1358 aa8.85□□□□□ -0.99
HCG25-219ENST00000442228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.85□□□□□ -0.99
HCG25-219ENST00000442228 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
HCG25-219ENST00000442228 CASKIN1Q8WXD9 1431 aa8.84□□□□□ -0.99
HCG25-219ENST00000442228 GPATCH8Q9UKJ3 1502 aaKnown RBP8.84□□□□□ -0.99
HCG25-219ENST00000442228 CCNB3Q8WWL7 1395 aa8.84□□□□□ -0.99
HCG25-219ENST00000442228 RNF17Q9BXT8 1623 aaKnown RBP8.83□□□□□ -1
HCG25-219ENST00000442228 NPHP4O75161 1426 aaPredicted RBP8.83□□□□□ -1
HCG25-219ENST00000442228 KIAA1107Q9UPP5 1409 aa8.83□□□□□ -1
HCG25-219ENST00000442228 DEPDC5O75140 1603 aa8.83□□□□□ -1
HCG25-219ENST00000442228 WASHC2CQ9Y4E1 1318 aa8.82□□□□□ -1
HCG25-219ENST00000442228 UGGT1Q9NYU2 1555 aa8.82□□□□□ -1
HCG25-219ENST00000442228 FAM135AQ9P2D6 1515 aa8.82□□□□□ -1
HCG25-219ENST00000442228 KIF3BO15066 747 aa8.82□□□□□ -1
HCG25-219ENST00000442228 VASPP50552 380 aaPredicted RBP8.82□□□□□ -1
HCG25-219ENST00000442228 ALKQ9UM73 1620 aa8.82□□□□□ -1
HCG25-219ENST00000442228 SYNMO15061 1565 aa8.82□□□□□ -1
HCG25-219ENST00000442228 ERICH6BQ5W0A0 696 aa8.81□□□□□ -1
HCG25-219ENST00000442228 PKNOX2Q96KN3 472 aa8.81□□□□□ -1
HCG25-219ENST00000442228 CLEC11AQ9Y240 323 aa8.81□□□□□ -1
HCG25-219ENST00000442228 FYCO1Q9BQS8 1478 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms