RNA–Protein interactions for RNA: ENST00000442019.6

CAGE1-204, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-204ENST00000442019 KIAA1107Q9UPP5 1409 aa9.57□□□□□ -0.88
CAGE1-204ENST00000442019 ABCC2Q92887 1545 aa9.57□□□□□ -0.88
CAGE1-204ENST00000442019 RRP1P56182 461 aaKnown RBP9.56□□□□□ -0.88
CAGE1-204ENST00000442019 FBLN2P98095 1184 aa9.56□□□□□ -0.88
CAGE1-204ENST00000442019 RALBP1Q15311 655 aa9.55□□□□□ -0.88
CAGE1-204ENST00000442019 PLEKHH2Q8IVE3 1493 aa9.55□□□□□ -0.88
CAGE1-204ENST00000442019 KDM5DQ9BY66 1539 aa9.55□□□□□ -0.88
CAGE1-204ENST00000442019 BACH2Q9BYV9 841 aa9.55□□□□□ -0.88
CAGE1-204ENST00000442019 CDK13Q14004 1512 aaKnown RBP9.54□□□□□ -0.88
CAGE1-204ENST00000442019 MYBBP1AQ9BQG0 1328 aaKnown RBP9.54□□□□□ -0.88
CAGE1-204ENST00000442019 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
CAGE1-204ENST00000442019 PDE4AP27815 886 aa9.53□□□□□ -0.88
CAGE1-204ENST00000442019 CARMIL2Q6F5E8 1435 aa9.52□□□□□ -0.89
CAGE1-204ENST00000442019 LAMC1P11047 1609 aa9.52□□□□□ -0.89
CAGE1-204ENST00000442019 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
CAGE1-204ENST00000442019 NEFMP07197 916 aa9.51□□□□□ -0.89
CAGE1-204ENST00000442019 SLC4A1APQ9BWU0 796 aaKnown RBP9.51□□□□□ -0.89
CAGE1-204ENST00000442019 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
CAGE1-204ENST00000442019 ANO8Q9HCE9 1232 aaPredicted RBP9.5□□□□□ -0.89
CAGE1-204ENST00000442019 RAPGEF6Q8TEU7 1601 aa9.5□□□□□ -0.89
CAGE1-204ENST00000442019 SHANK2Q9UPX8 1470 aa9.5□□□□□ -0.89
CAGE1-204ENST00000442019 RCAN3Q9UKA8 241 aa9.5□□□□□ -0.89
CAGE1-204ENST00000442019 KIAA0556O60303 1618 aa9.5□□□□□ -0.89
CAGE1-204ENST00000442019 CAMSAP2Q08AD1 1489 aa9.5□□□□□ -0.89
CAGE1-204ENST00000442019 BLMP54132 1417 aaPredicted RBP9.49□□□□□ -0.89
CAGE1-204ENST00000442019 PARD3Q8TEW0 1356 aa9.49□□□□□ -0.89
CAGE1-204ENST00000442019 FOXD1Q16676 465 aa9.48□□□□□ -0.89
CAGE1-204ENST00000442019 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
CAGE1-204ENST00000442019 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
CAGE1-204ENST00000442019 EXOC6Q8TAG9 804 aa9.47□□□□□ -0.89
CAGE1-204ENST00000442019 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
CAGE1-204ENST00000442019 NUP153P49790 1475 aaKnown RBP9.46□□□□□ -0.89
CAGE1-204ENST00000442019 TROQ12816 1431 aaPredicted RBP9.46□□□□□ -0.89
CAGE1-204ENST00000442019 GSE1Q14687 1217 aa9.46□□□□□ -0.9
CAGE1-204ENST00000442019 ZCCHC11Q5TAX3 1644 aaKnown RBP9.46□□□□□ -0.9
CAGE1-204ENST00000442019 TRPM1Q7Z4N2 1603 aa9.46□□□□□ -0.9
CAGE1-204ENST00000442019 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
CAGE1-204ENST00000442019 ANKRD30AQ9BXX3 1397 aa9.45□□□□□ -0.9
CAGE1-204ENST00000442019 DISP1Q96F81 1524 aa9.45□□□□□ -0.9
CAGE1-204ENST00000442019 PTPRGP23470 1445 aa9.45□□□□□ -0.9
CAGE1-204ENST00000442019 VIRMAQ69YN4 1812 aaKnown RBP9.45□□□□□ -0.9
CAGE1-204ENST00000442019 ABCA8O94911 1581 aa9.44□□□□□ -0.9
CAGE1-204ENST00000442019 NPM2Q86SE8 214 aaKnown RBP9.44□□□□□ -0.9
CAGE1-204ENST00000442019 ARAP3Q8WWN8 1544 aa9.43□□□□□ -0.9
CAGE1-204ENST00000442019 UBE2Q2Q8WVN8 375 aa9.43□□□□□ -0.9
CAGE1-204ENST00000442019 LAS1LQ9Y4W2 734 aaKnown RBP9.43□□□□□ -0.9
CAGE1-204ENST00000442019 CDC42BPAQ5VT25 1732 aa9.43□□□□□ -0.9
CAGE1-204ENST00000442019 EIF2AK4Q9P2K8 1649 aaKnown RBP9.43□□□□□ -0.9
CAGE1-204ENST00000442019 GPATCH8Q9UKJ3 1502 aaKnown RBP9.43□□□□□ -0.9
CAGE1-204ENST00000442019 COL17A1Q9UMD9 1497 aaPredicted RBP9.42□□□□□ -0.9
CAGE1-204ENST00000442019 ANKRD50Q9ULJ7 1429 aa9.42□□□□□ -0.9
CAGE1-204ENST00000442019 GPRASP1Q5JY77 1395 aa9.42□□□□□ -0.9
CAGE1-204ENST00000442019 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
CAGE1-204ENST00000442019 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
CAGE1-204ENST00000442019 ASXL2Q76L83 1435 aa9.41□□□□□ -0.9
CAGE1-204ENST00000442019 ARHGEF5Q12774 1597 aa9.41□□□□□ -0.9
CAGE1-204ENST00000442019 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
CAGE1-204ENST00000442019 NFKBIBQ15653 356 aa9.41□□□□□ -0.9
CAGE1-204ENST00000442019 CENPQQ7L2Z9 268 aaPredicted RBP9.41□□□□□ -0.9
CAGE1-204ENST00000442019 PKD2Q13563 968 aa9.4□□□□□ -0.9
CAGE1-204ENST00000442019 EIF3AQ14152 1382 aaKnown RBP9.4□□□□□ -0.9
CAGE1-204ENST00000442019 WDR7Q9Y4E6 1490 aa9.39□□□□□ -0.91
CAGE1-204ENST00000442019 FAM43AQ8N2R8 423 aa9.39□□□□□ -0.91
CAGE1-204ENST00000442019 CFAP74Q9C0B2 1584 aa9.39□□□□□ -0.91
CAGE1-204ENST00000442019 ABCA9Q8IUA7 1624 aa9.39□□□□□ -0.91
CAGE1-204ENST00000442019 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
CAGE1-204ENST00000442019 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
CAGE1-204ENST00000442019 PRAG1Q86YV5 1406 aa9.38□□□□□ -0.91
CAGE1-204ENST00000442019 DAXXQ9UER7 740 aaPredicted RBP9.38□□□□□ -0.91
CAGE1-204ENST00000442019 ADGRL1O94910 1474 aa9.37□□□□□ -0.91
CAGE1-204ENST00000442019 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
CAGE1-204ENST00000442019 ZNF644Q9H582 1327 aaPredicted RBP9.37□□□□□ -0.91
CAGE1-204ENST00000442019 ST20-MTHFSA0A0A6YYL1 179 aa9.37□□□□□ -0.91
CAGE1-204ENST00000442019 FAM69CQ0P6D2 419 aa9.37□□□□□ -0.91
CAGE1-204ENST00000442019 CRBNQ96SW2 442 aa9.37□□□□□ -0.91
CAGE1-204ENST00000442019 POLR3GLQ9BT43 218 aa9.37□□□□□ -0.91
CAGE1-204ENST00000442019 ADAMTSL3P82987 1691 aa9.37□□□□□ -0.91
CAGE1-204ENST00000442019 CFDP1Q9UEE9 299 aaPredicted RBP9.37□□□□□ -0.91
CAGE1-204ENST00000442019 C9orf84Q5VXU9 1444 aa9.36□□□□□ -0.91
CAGE1-204ENST00000442019 UNC13BO14795 1591 aa9.36□□□□□ -0.91
CAGE1-204ENST00000442019 CCDC144AA2RUR9 1427 aa9.36□□□□□ -0.91
CAGE1-204ENST00000442019 PER1O15534 1290 aaPredicted RBP9.36□□□□□ -0.91
CAGE1-204ENST00000442019 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.36□□□□□ -0.91
CAGE1-204ENST00000442019 FRAT1Q92837 279 aaPredicted RBP9.36□□□□□ -0.91
CAGE1-204ENST00000442019 RTN4Q9NQC3 1192 aaKnown RBP9.36□□□□□ -0.91
CAGE1-204ENST00000442019 NEO1Q92859 1461 aa9.36□□□□□ -0.91
CAGE1-204ENST00000442019 BRPF3Q9ULD4 1205 aa9.35□□□□□ -0.91
CAGE1-204ENST00000442019 TSPOAP1O95153 1857 aa9.35□□□□□ -0.91
CAGE1-204ENST00000442019 NUP155O75694 1391 aa9.35□□□□□ -0.91
CAGE1-204ENST00000442019 ZMYM3Q14202 1370 aa9.35□□□□□ -0.91
CAGE1-204ENST00000442019 KDM4FA0A1W2PPD8 638 aa9.35□□□□□ -0.91
CAGE1-204ENST00000442019 CCDC141Q6ZP82 1450 aa9.34□□□□□ -0.91
CAGE1-204ENST00000442019 C8orf34Q49A92 452 aa9.34□□□□□ -0.91
CAGE1-204ENST00000442019 ZNF326Q5BKZ1 582 aaKnown RBP9.34□□□□□ -0.91
CAGE1-204ENST00000442019 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.91
CAGE1-204ENST00000442019 FAM135AQ9P2D6 1515 aa9.34□□□□□ -0.91
CAGE1-204ENST00000442019 MAST1Q9Y2H9 1570 aa9.34□□□□□ -0.91
CAGE1-204ENST00000442019 PLXNC1O60486 1568 aa9.33□□□□□ -0.92
CAGE1-204ENST00000442019 NINLQ9Y2I6 1382 aa9.33□□□□□ -0.92
CAGE1-204ENST00000442019 ERBINQ96RT1 1412 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms